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Conformers: ABBIImiBZICOPNSYNN
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Structure of a domain-swapped FOXP3 dimer

Results of the assignment of 80 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
013qrf_C_DT4001_DT4002BBBBB00430.33 BB00
023qrf_C_DT4002_DA4003NANNANT00.46 BB02
033qrf_C_DA4003_DG4004BBBBB00700.28 BB00
043qrf_C_DG4004_DG4005BBwBB02830.20 BB02
053qrf_C_DG4005_DA4006BBBBB00510.25 BB00
063qrf_C_DA4006_DA4007BB2BB07550.32 BB07
073qrf_C_DA4007_DA4008BBBBB00700.18 BB00
083qrf_C_DA4008_DA4009BBwBB02840.13 BB02
093qrf_C_DA4009_DT4010BBwBB02690.19 BB02
103qrf_C_DT4010_DT4011BBwBB02440.30 BB02
113qrf_C_DT4011_DT4012BBwBB02760.20 BB02
123qrf_C_DT4012_DG4013BBBBB00600.16 BB00
133qrf_C_DG4013_DT4014BBwBB02380.32 BB02
143qrf_C_DT4014_DT4015BBwBB02810.17 BB02
153qrf_C_DT4015_DT4016BBBBB00420.19 BB00
163qrf_C_DT4016_DC4017BBBBB00650.17 BB00
173qrf_C_DC4017_DA4018BBwBB02550.26 BB02
183qrf_C_DA4018_DT4019BBBBB00220.39 BB00
193qrf_C_DT4019_DA4020BBwBB02690.22 BB02
203qrf_C_DA4020_DG4021BBwBB02640.32 BB02
213qrf_D_DA5001_DA5002NANNANT00.64 BB11
223qrf_D_DA5002_DC5003NANNANT00.63 BB02
233qrf_D_DC5003_DT5004NANNANT00.47 BB00
243qrf_D_DT5004_DA5005BBBBB00570.32 BB00
253qrf_D_DA5005_DT5006BBBBB00450.39 BB00
263qrf_D_DT5006_DG5007BBBBB00570.24 BB00
273qrf_D_DG5007_DA5008B12BB04650.27 BB04
283qrf_D_DA5008_DA5009BBwBB02870.19 BB02
293qrf_D_DA5009_DA5010BBBBB00350.16 BB00
303qrf_D_DA5010_DC5011NANNANT00.40 BB02
313qrf_D_DC5011_DA5012BBBBB00470.37 BB00
323qrf_D_DA5012_DA5013BBwBB02460.25 BB02
333qrf_D_DA5013_DA5014B12BB04310.19 BB04
343qrf_D_DA5014_DT5015BBwBB02840.14 BB02
353qrf_D_DT5015_DT5016BBBBB00560.30 BB00
363qrf_D_DT5016_DT5017BBwBB02760.18 BB02
373qrf_D_DT5017_DT5018BBBBB00560.34 BB00
383qrf_D_DT5018_DC5019BBwBB02910.13 BB02
393qrf_D_DC5019_DC5020miBBB15910.15 BB15
403qrf_D_DC5020_DT5021miBBB13840.21 BB13
413qrf_A_DT4001_DT4002BBBBB00440.33 BB00
423qrf_A_DT4002_DA4003NANNANT00.46 BB02
433qrf_A_DA4003_DG4004BBBBB00700.28 BB00
443qrf_A_DG4004_DG4005BBwBB02830.20 BB02
453qrf_A_DG4005_DA4006BBBBB00500.25 BB00
463qrf_A_DA4006_DA4007BB2BB07560.32 BB07
473qrf_A_DA4007_DA4008BBBBB00700.18 BB00
483qrf_A_DA4008_DA4009BBwBB02840.13 BB02
493qrf_A_DA4009_DT4010BBwBB02690.19 BB02
503qrf_A_DT4010_DT4011BBwBB02440.30 BB02
513qrf_A_DT4011_DT4012BBwBB02760.21 BB02
523qrf_A_DT4012_DG4013BBBBB00590.16 BB00
533qrf_A_DG4013_DT4014BBwBB02370.33 BB02
543qrf_A_DT4014_DT4015BBwBB02800.17 BB02
553qrf_A_DT4015_DT4016BBBBB00420.19 BB00
563qrf_A_DT4016_DC4017BBBBB00640.17 BB00
573qrf_A_DC4017_DA4018BBwBB02550.26 BB02
583qrf_A_DA4018_DT4019BBBBB00220.40 BB00
593qrf_A_DT4019_DA4020BBwBB02680.22 BB02
603qrf_A_DA4020_DG4021BBwBB02650.32 BB02
613qrf_B_DA5001_DA5002NANNANT00.64 BB11
623qrf_B_DA5002_DC5003NANNANT00.63 BB02
633qrf_B_DC5003_DT5004NANNANT00.47 BB00
643qrf_B_DT5004_DA5005BBBBB00570.32 BB00
653qrf_B_DA5005_DT5006BBBBB00450.39 BB00
663qrf_B_DT5006_DG5007BBBBB00570.25 BB00
673qrf_B_DG5007_DA5008B12BB04650.27 BB04
683qrf_B_DA5008_DA5009BBwBB02860.20 BB02
693qrf_B_DA5009_DA5010BBBBB00370.16 BB00
703qrf_B_DA5010_DC5011NANNANT00.40 BB02
713qrf_B_DC5011_DA5012BBBBB00460.37 BB00
723qrf_B_DA5012_DA5013BBwBB02460.25 BB02
733qrf_B_DA5013_DA5014B12BB04310.19 BB04
743qrf_B_DA5014_DT5015BBwBB02850.14 BB02
753qrf_B_DT5015_DT5016BBBBB00560.30 BB00
763qrf_B_DT5016_DT5017BBwBB02750.18 BB02
773qrf_B_DT5017_DT5018BBBBB00560.34 BB00
783qrf_B_DT5018_DC5019BBwBB02910.13 BB02
793qrf_B_DC5019_DC5020miBBB15910.15 BB15
803qrf_B_DC5020_DT5021miBBB13840.21 BB13

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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