Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
DNA Polymerase Eta in Complex With Undamaged DNA
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 21 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 3mfh_P_DG1_DT2 | A-B | AB05 | 30 | 0.21 |
| 02 | 3mfh_P_DT2_DC3 | BBB | BB00 | 79 | 0.24 |
| 03 | 3mfh_P_DC3_DC4 | BBB | BB00 | 75 | 0.13 |
| 04 | 3mfh_P_DC4_DT5 | BBB | BB01 | 91 | 0.18 |
| 05 | 3mfh_P_DT5_DC6 | BBB | BB01 | 87 | 0.16 |
| 06 | 3mfh_P_DC6_DC7 | B-A | BA01 | 38 | 0.18 |
| 07 | 3mfh_P_DC7_DC8 | A-B | AB01 | 60 | 0.34 |
| 08 | 3mfh_P_DC8_DC9 | BBB | BB01 | 56 | 0.23 |
| 09 | 3mfh_P_DC9_DT10 | BBB | BB01 | 23 | 0.24 |
| 10 | 3mfh_T_DT4_DT5 | SYN | BBS1 | 82 | 0.27 |
| 11 | 3mfh_T_DT5_DG6 | BBB | BB00 | 74 | 0.25 |
| 12 | 3mfh_T_DG6_DA7 | B-A | BA09 | 94 | 0.12 |
| 13 | 3mfh_T_DA7_DG8 | AAA | AA08 | 48 | 0.34 |
| 14 | 3mfh_T_DG8_DG9 | NAN | NANT | 0 | 0.50 |
| 15 | 3mfh_T_DG9_DG10 | BBB | BB01 | 9 | 0.27 |
| 16 | 3mfh_T_DG10_DG11 | A-B | AB01 | 24 | 0.32 |
| 17 | 3mfh_T_DG11_DA12 | B12 | BB04 | 62 | 0.30 |
| 18 | 3mfh_T_DA12_DG13 | BBB | BB00 | 87 | 0.25 |
| 19 | 3mfh_T_DG13_DG14 | BB2 | BB07 | 55 | 0.20 |
| 20 | 3mfh_T_DG14_DA15 | BBB | BB00 | 89 | 0.21 |
| 21 | 3mfh_T_DA15_DC16 | B-A | BA05 | 81 | 0.15 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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