DNATCO v4.1: results

Crystal structure of a replicative DNA polymerase bound to the oxidized guanine lesion guanidinohydantoin

Results of the assignment of 50 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	3l8b_C_DT5_DT6	BBB	BB00	58	0.29	BB00
02	3l8b_C_DT6_DA7	BBB	BB00	80	0.21	BB00
03	3l8b_C_DA7_DA8	BBw	BB02	91	0.15	BB02
04	3l8b_C_DA8_DG9	B12	BB04	65	0.20	BB04
05	3l8b_C_DG9_DC10	BBw	BB03	63	0.35	BB03
06	3l8b_C_DC10_DA11	BBw	BB02	28	0.52	BB02
07	3l8b_C_DA11_DG12	BBw	BB02	38	0.31	BB02
08	3l8b_C_DG12_DT13	BBw	BB03	88	0.38	BB03
09	3l8b_C_DT13_DC14	BBB	BB00	54	0.46	BB00
10	3l8b_C_DC14_DC15	BBw	BB02	80	0.23	BB02
11	3l8b_C_DC15_DG16	BBB	BB00	81	0.26	BB00
12	3l8b_C_DG16_DC17	NAN	NANT	0	0.43	BB11
13	3l8b_C_DC17_DG18	NAN	NANT	0	0.97	OP17
14	3l8b_D_DG101_DC102	BBB	BB00	20	0.51	BB00
15	3l8b_D_DC102_DG103	BBB	BB00	56	0.48	BB00
16	3l8b_D_DG103_DG104	NAN	NANT	0	0.45	BB13
17	3l8b_D_DG104_DA105	BBw	BB03	59	0.33	BB03
18	3l8b_D_DA105_DC106	BBB	BB00	54	0.46	BB00
19	3l8b_D_DC106_DT107	B12	BB04	67	0.32	BB04
20	3l8b_D_DT107_DG108	BBw	BB02	95	0.15	BB02
21	3l8b_D_DG108_DC109	BBw	BB02	75	0.19	BB02
22	3l8b_D_DC109_DT110	BBw	BB02	89	0.20	BB02
23	3l8b_D_DT110_DT111	BBw	BB11	58	0.29	BB11
24	3l8b_D_DT111_DA112	NAN	NANT	0	0.63	BB02
25	3l8b_D_DA112_DA113	BBB	BB00	58	0.36	BB00
26	3l8b_E_DT5_DT6	BBB	BB00	44	0.32	BB00
27	3l8b_E_DT6_DA7	BBB	BB00	76	0.25	BB00
28	3l8b_E_DA7_DA8	NAN	NANT	0	0.39	BB03
29	3l8b_E_DA8_DG9	BBB	BB00	50	0.33	BB00
30	3l8b_E_DG9_DC10	BBw	BB03	61	0.32	BB03
31	3l8b_E_DC10_DA11	BBw	BB02	36	0.46	BB02
32	3l8b_E_DA11_DG12	NAN	NANT	0	0.35	BB03
33	3l8b_E_DG12_DT13	BBB	BB00	59	0.30	BB00
34	3l8b_E_DT13_DC14	BBB	BB00	94	0.15	BB00
35	3l8b_E_DC14_DC15	BBw	BB02	87	0.25	BB02
36	3l8b_E_DC15_DG16	BBB	BB00	86	0.25	BB00
37	3l8b_E_DG16_DC17	BBw	BB03	67	0.17	BB03
38	3l8b_E_DC17_DG18	NAN	NANT	0	1.01	OP17
39	3l8b_F_DG101_DC102	BBB	BB00	23	0.38	BB00
40	3l8b_F_DC102_DG103	BBB	BB00	28	0.46	BB00
41	3l8b_F_DG103_DG104	BBw	BB03	64	0.34	BB03
42	3l8b_F_DG104_DA105	BBw	BB02	62	0.41	BB02
43	3l8b_F_DA105_DC106	BBB	BB00	56	0.37	BB00
44	3l8b_F_DC106_DT107	B12	BB04	70	0.29	BB04
45	3l8b_F_DT107_DG108	BBw	BB02	98	0.14	BB02
46	3l8b_F_DG108_DC109	BBB	BB01	77	0.27	BB01
47	3l8b_F_DC109_DT110	BBB	BB00	81	0.19	BB00
48	3l8b_F_DT110_DT111	BBw	BB11	73	0.22	BB11
49	3l8b_F_DT111_DA112	NAN	NANT	0	0.63	BB02
50	3l8b_F_DA112_DA113	BBB	BB00	53	0.37	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 50 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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