DNATCO v4.1: results

Dpo4 extension ternary complex with a C base opposite the 2-aminofluorene-guanine [AF]G lesion

Results of the assignment of 53 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	3khh_D_DG802_DT803	B12	BB04	34	0.27	BB04
02	3khh_D_DT803_DT804	B12	BB04	63	0.28	BB04
03	3khh_D_DT804_DG805	NAN	NANT	0	0.69	BB11
04	3khh_D_DG805_DG806	miB	BB14	27	0.34	BB14
05	3khh_D_DG806_DA807	B12	BB04	23	0.30	BB04
06	3khh_D_DA807_DT808	BBB	BB00	17	0.23	BB00
07	3khh_D_DT808_DG809	BBB	BB00	34	0.42	BB00
08	3khh_D_DG809_DG810	B-A	BA08	60	0.41	BA08
09	3khh_D_DG810_DT811	A-B	AB01	48	0.34	AB01
10	3khh_D_DT811_DA812	BBB	BB01	72	0.23	BB01
11	3khh_D_DA812_DG813	BBB	BB01	81	0.18	BB01
12	3khh_E_DA904_DC905	NAN	NANT	0	1.69	OP29
13	3khh_E_DC905_DG906	NAN	NANT	0	1.96	OP10
14	3khh_E_DG906_DC907	B-A	BA05	69	0.20	BA05
15	3khh_E_DC907_DT908	A-B	AB03	82	0.35	AB03
16	3khh_E_DT908_DA909	BBB	BB00	86	0.11	BB00
17	3khh_E_DA909_DC910	BBB	BB01	63	0.23	BB01
18	3khh_E_DC910_DC911	BBB	BB00	33	0.28	BB00
19	3khh_E_DC911_DA912	B12	BB04	53	0.24	BB04
20	3khh_E_DA912_DT913	BBB	BB00	81	0.20	BB00
21	3khh_E_DT913_DC914	B-A	BA08	78	0.33	BA08
22	3khh_E_DC914_DC915	NAN	NANT	0	0.38	BB17
23	3khh_E_DC915_DA916	NAN	NANT	0	0.31	BB14
24	3khh_E_DA916_DA917	BBB	BB00	29	0.24	BB00
25	3khh_E_DA917_DC918	miB	BB10	80	0.30	BB10
26	3khh_E_DC918_DC919	NAN	NANT	0	1.87	OP26
27	3khh_H_DG1802_DT1803	A-B	AB05	10	0.23	AB05
28	3khh_H_DT1803_DT1804	miB	BB10	65	0.18	BB10
29	3khh_H_DT1804_DG1805	BBB	BB00	13	0.35	BB00
30	3khh_H_DG1805_DG1806	BBB	BB01	78	0.22	BB01
31	3khh_H_DG1806_DA1807	BBB	BB00	53	0.24	BB00
32	3khh_H_DA1807_DT1808	B-A	BA05	75	0.13	BA05
33	3khh_H_DT1808_DG1809	A-B	AB01	52	0.39	AB01
34	3khh_H_DG1809_DG1810	BBB	BB00	54	0.24	BB00
35	3khh_H_DG1810_DT1811	miB	BB10	50	0.39	BB10
36	3khh_H_DT1811_DA1812	NAN	NANT	0	0.27	BB07
37	3khh_H_DA1812_DG1813	BBB	BB00	82	0.14	BB00
38	3khh_J_DA1903_DA1904	NAN	NANT	0	0.54	BA08
39	3khh_J_DA1904_DC1905	NAN	NANT	0	0.97	AA07
40	3khh_J_DC1905_DG1906	NAN	NANT	0	0.49	AB04
41	3khh_J_DG1906_DC1907	BBw	BB16	29	0.82	BB16
42	3khh_J_DC1907_DT1908	BBB	BB00	71	0.22	BB00
43	3khh_J_DT1908_DA1909	B12	BB04	42	0.16	BB04
44	3khh_J_DA1909_DC1910	BBB	BB00	59	0.29	BB00
45	3khh_J_DC1910_DC1911	miB	BB10	68	0.32	BB10
46	3khh_J_DC1911_DA1912	BBB	BB00	74	0.15	BB00
47	3khh_J_DA1912_DT1913	miB	BB10	63	0.25	BB10
48	3khh_J_DT1913_DC1914	NAN	NANT	0	0.43	BB08
49	3khh_J_DC1914_DC1915	NAN	NANT	0	0.39	BB16
50	3khh_J_DC1915_DA1916	miB	BB10	41	0.39	BB10
51	3khh_J_DA1916_DA1917	BBB	BB00	84	0.21	BB00
52	3khh_J_DA1917_DC1918	miB	BB10	86	0.19	BB10
53	3khh_J_DC1918_DC1919	NAN	NANT	0	0.96	IC06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 53 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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