Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
MutM lesion recognition control complex with N174C crosslinking site
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 27 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 3jr5_B_DA1_DG2 | BBB | BB00 | 73 | 0.34 |
| 02 | 3jr5_B_DG2_DG3 | B-A | BA13 | 84 | 0.17 |
| 03 | 3jr5_B_DG3_DT4 | A-B | AB05 | 47 | 0.24 |
| 04 | 3jr5_B_DT4_DA5 | BBB | BB00 | 87 | 0.20 |
| 05 | 3jr5_B_DA5_DG6 | BBB | BB00 | 69 | 0.30 |
| 06 | 3jr5_B_DG6_DA7 | BB2 | BB07 | 77 | 0.28 |
| 07 | 3jr5_B_DA7_DC8 | BBB | BB01 | 82 | 0.25 |
| 08 | 3jr5_B_DC8_DT9 | AAA | AA02 | 27 | 0.49 |
| 09 | 3jr5_B_DT9_DC10 | NAN | NANT | 0 | 0.81 |
| 10 | 3jr5_B_DC10_DG11 | AAA | AA02 | 24 | 0.45 |
| 11 | 3jr5_B_DG11_DG12 | BBB | BB01 | 73 | 0.29 |
| 12 | 3jr5_B_DG12_DA13 | BBB | BB00 | 67 | 0.33 |
| 13 | 3jr5_B_DA13_DC14 | BBB | BB01 | 66 | 0.20 |
| 14 | 3jr5_B_DC14_DG15 | NAN | NANT | 0 | 0.68 |
| 15 | 3jr5_C_DC3_DG4 | BBB | BB00 | 71 | 0.28 |
| 16 | 3jr5_C_DG4_DT5 | BBB | BB00 | 70 | 0.19 |
| 17 | 3jr5_C_DT5_DC6 | B-A | BA01 | 63 | 0.20 |
| 18 | 3jr5_C_DC6_DC7 | AAA | AA02 | 61 | 0.29 |
| 19 | 3jr5_C_DC7_OGX8 | NAN | NANT | 0 | 1.13 |
| 20 | 3jr5_C_OGX8_DA9 | NAN | NANT | 0 | 0.94 |
| 21 | 3jr5_C_DA9_DG10 | B-A | BA05 | 78 | 0.30 |
| 22 | 3jr5_C_DG10_DT11 | BBB | BB00 | 24 | 0.33 |
| 23 | 3jr5_C_DT11_DC12 | B-A | BA05 | 77 | 0.20 |
| 24 | 3jr5_C_DC12_DT13 | A-B | AB03 | 82 | 0.33 |
| 25 | 3jr5_C_DT13_DA14 | BBB | BB00 | 94 | 0.13 |
| 26 | 3jr5_C_DA14_DC15 | B-A | BA05 | 70 | 0.14 |
| 27 | 3jr5_C_DC15_DC16 | BBB | BB01 | 38 | 0.28 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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