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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Structure of human Rev1-DNA-dNTP ternary complex

Results of the assignment of 100 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0013gqc_E_DA1_DT2BBBBB00430.22 BB00
0023gqc_E_DT2_DC3miBBB10590.41 BB10
0033gqc_E_DC3_DC4NANNANT00.39 BA10
0043gqc_E_DC4_DT5BBwBB17490.35 BB17
0053gqc_E_DT5_DC6miBBB10950.28 BB10
0063gqc_E_DC6_DC7B-ABA09440.30 BA09
0073gqc_E_DC7_DC8A-BAB01290.24 AB01
0083gqc_E_DC8_DC9BBBBB01750.15 BB01
0093gqc_E_DC9_DT10BBBBB01580.20 BB01
0103gqc_E_DT10_DA11BBBBB01260.35 BB01
0113gqc_F_DT1_DA2NANNANT01.18 AA02
0123gqc_F_DA2_DA3AAAAA02550.40 AA02
0133gqc_F_DA3_DG4NANNANT01.27 OP31
0143gqc_F_DG4_DG5NANNANT00.41 OP28
0153gqc_F_DG5_DT6B-ABA05520.23 BA05
0163gqc_F_DT6_DA7NANNANT00.34 BB10
0173gqc_F_DA7_DG8BBBBB00710.23 BB00
0183gqc_F_DG8_DG9BBBBB00730.31 BB00
0193gqc_F_DG9_DG10BBBBB00820.28 BB00
0203gqc_F_DG10_DG11BB2BB07700.27 BB07
0213gqc_F_DG11_DA12BBBBB00380.27 BB00
0223gqc_F_DA12_DG13miBBB1590.41 BB15
0233gqc_F_DG13_DG14NANNANT00.33 BA08
0243gqc_F_DG14_DA15BBBBB00300.39 BB00
0253gqc_F_DA15_DT16B-ABA05740.21 BA05
0263gqc_G_DA1_DT2BBwBB02670.23 BB02
0273gqc_G_DT2_DC3BBBBB00770.24 BB00
0283gqc_G_DC3_DC4B-ABA08590.47 BA08
0293gqc_G_DC4_DT5miBBB10240.28 BB10
0303gqc_G_DT5_DC6NANNANT00.57 AA02
0313gqc_G_DC6_DC7BBBBB01480.35 BB01
0323gqc_G_DC7_DC8B12BB04260.30 BB04
0333gqc_G_DC8_DC9BBBBB01570.20 BB01
0343gqc_G_DC9_DT10BBBBB00600.25 BB00
0353gqc_G_DT10_DA11miBBB15530.31 BB15
0363gqc_H_DT1_DA2NANNANT00.77 OP12
0373gqc_H_DA2_DA3AAAAA02620.35 AA02
0383gqc_H_DA3_DG4NANNANT01.31 OP31
0393gqc_H_DG4_DG5NANNANT00.36 OP28
0403gqc_H_DG5_DT6BBBBB00320.39 BB00
0413gqc_H_DT6_DA7BBBBB00320.44 BB00
0423gqc_H_DA7_DG8BBBBB01870.22 BB01
0433gqc_H_DG8_DG9BBBBB00780.34 BB00
0443gqc_H_DG9_DG10BBBBB00740.29 BB00
0453gqc_H_DG10_DG11BB2BB07290.25 BB07
0463gqc_H_DG11_DA12B12BB04590.26 BB04
0473gqc_H_DA12_DG13B-ABA05230.24 BA05
0483gqc_H_DG13_DG14BBBBB01330.37 BB01
0493gqc_H_DG14_DA15BBBBB00730.27 BB00
0503gqc_H_DA15_DT16BBwBB03550.43 BB03
0513gqc_I_DA1_DT2B-ABA05610.31 BA05
0523gqc_I_DT2_DC3BBBBB00450.29 BB00
0533gqc_I_DC3_DC4BBBBB00750.27 BB00
0543gqc_I_DC4_DT5miBBB10590.23 BB10
0553gqc_I_DT5_DC6B-ABA05330.35 BA05
0563gqc_I_DC6_DC7B-ABA05360.27 BA05
0573gqc_I_DC7_DC8A-BAB01340.31 AB01
0583gqc_I_DC8_DC9B-ABA05580.24 BA05
0593gqc_I_DC9_DT10BBBBB01440.23 BB01
0603gqc_I_DT10_DA11NANNANT00.49 BA05
0613gqc_J_DT1_DA2NANNANT00.73 BB16
0623gqc_J_DA2_DA3AAAAA02430.41 AA02
0633gqc_J_DA3_DG4NANNANT01.27 OP31
0643gqc_J_DG4_DG5NANNANT00.38 OP28
0653gqc_J_DG5_DT6B-ABA05690.24 BA05
0663gqc_J_DT6_DA7BBBBB0090.43 BB00
0673gqc_J_DA7_DG8B12BB04260.17 BB04
0683gqc_J_DG8_DG9BBBBB00780.30 BB00
0693gqc_J_DG9_DG10BBBBB00830.28 BB00
0703gqc_J_DG10_DG11BB2BB07570.24 BB07
0713gqc_J_DG11_DA12BBBBB00710.28 BB00
0723gqc_J_DA12_DG13miBBB14390.52 BB14
0733gqc_J_DG13_DG14NANNANT00.37 BB07
0743gqc_J_DG14_DA15B12BB04610.24 BB04
0753gqc_J_DA15_DT16B-ABA05160.24 BA05
0763gqc_K_DA1_DT2BBBBB00500.23 BB00
0773gqc_K_DT2_DC3BBBBB00630.18 BB00
0783gqc_K_DC3_DC4B-ABA08810.36 BA08
0793gqc_K_DC4_DT5A-BAB03740.28 AB03
0803gqc_K_DT5_DC6BBBBB01510.26 BB01
0813gqc_K_DC6_DC7NANNANT00.64 BB12
0823gqc_K_DC7_DC8NANNANT00.61 BB16
0833gqc_K_DC8_DC9BBBBB01760.14 BB01
0843gqc_K_DC9_DT10BBBBB01670.17 BB01
0853gqc_K_DT10_DA11NANNANT00.33 BB01
0863gqc_L_DT1_DA2NANNANT00.79 OP12
0873gqc_L_DA2_DA3AAAAA02400.40 AA02
0883gqc_L_DA3_DG4NANNANT01.32 OP31
0893gqc_L_DG4_DG5NANNANT00.38 OP28
0903gqc_L_DG5_DT6B-ABA05570.29 BA05
0913gqc_L_DT6_DA7miBBB10230.35 BB10
0923gqc_L_DA7_DG8miBBB15180.37 BB15
0933gqc_L_DG8_DG9B12BB04510.19 BB04
0943gqc_L_DG9_DG10BBBBB00710.28 BB00
0953gqc_L_DG10_DG11BB2BB07250.25 BB07
0963gqc_L_DG11_DA12NANNANT00.32 BB15
0973gqc_L_DA12_DG13BBBBB00470.37 BB00
0983gqc_L_DG13_DG14B-ABA13630.25 BA13
0993gqc_L_DG14_DA15NANNANT00.53 BB16
1003gqc_L_DA15_DT16BBBBB01890.14 BB01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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