DNATCO v4.1: results

Crystal structure of guanine riboswitch C74U mutant bound to 6-chloroguanine

Results of the assignment of 62 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	3fo4_A_A17_C18	AAw	AA01	87	0.14	AA01
02	3fo4_A_C18_A19	AAA	AA00	36	0.24	AA00
03	3fo4_A_A19_U20	AAA	AA00	92	0.13	AA00
04	3fo4_A_U20_A21	AAA	AA00	54	0.30	AA00
05	3fo4_A_A21_U22	NAN	NANT	0	0.71	OP04
06	3fo4_A_U22_A23	NAN	NANT	0	0.69	ZZ1S
07	3fo4_A_A23_A24	NAN	NANT	0	0.99	OP29
08	3fo4_A_A24_U25	OPN	OP01	82	0.27	OP01
09	3fo4_A_U25_C26	AAA	AA00	57	0.29	AA00
10	3fo4_A_C26_G27	AAA	AA00	75	0.27	AA00
11	3fo4_A_G27_C28	AAw	AA01	82	0.24	AA01
12	3fo4_A_C28_G29	AAA	AA00	87	0.17	AA00
13	3fo4_A_G29_U30	AAA	AA00	80	0.17	AA00
14	3fo4_A_U30_G31	AAA	AA00	80	0.16	AA00
15	3fo4_A_G31_G32	AAA	AA00	71	0.28	AA00
16	3fo4_A_G32_A33	AAA	AA00	72	0.24	AA00
17	3fo4_A_A33_U34	A-B	AB05	75	0.22	AB05
18	3fo4_A_U34_A35	NAN	NANT	0	1.00	OP22
19	3fo4_A_A35_U36	NAN	NANT	0	0.47	OP21
20	3fo4_A_U36_G37	OPN	OP11	87	0.39	OP11
21	3fo4_A_G37_G38	AAA	AA00	68	0.20	AA00
22	3fo4_A_G38_C39	NAN	NANT	0	0.36	OP01
23	3fo4_A_C39_A40	AAA	AA00	37	0.30	AA00
24	3fo4_A_A40_C41	AAA	AA00	89	0.10	AA00
25	3fo4_A_C41_G42	AAA	AA00	85	0.18	AA00
26	3fo4_A_G42_C43	AAA	AA00	73	0.27	AA00
27	3fo4_A_C43_A44	AAA	AA00	92	0.17	AA00
28	3fo4_A_A44_A45	AAA	AA00	75	0.22	AA00
29	3fo4_A_A45_G46	AAA	AA00	54	0.27	AA00
30	3fo4_A_G46_U47	A-B	AB05	15	0.62	AB05
31	3fo4_A_U47_U48	NAN	NANT	0	0.81	OP17
32	3fo4_A_U48_U49	NAN	NANT	0	0.64	OP20
33	3fo4_A_U49_C50	OPN	OP15	35	0.70	OP15
34	3fo4_A_C50_U51	AAA	AA08	56	0.38	AA08
35	3fo4_A_U51_A52	AAA	AA00	75	0.29	AA00
36	3fo4_A_A52_C53	AAA	AA08	37	0.33	AA08
37	3fo4_A_C53_C54	OPN	OP01	16	0.59	OP01
38	3fo4_A_C54_G55	AAA	AA00	52	0.32	AA00
39	3fo4_A_G55_G56	AAA	AA00	93	0.14	AA00
40	3fo4_A_G56_G57	AAA	AA00	92	0.14	AA00
41	3fo4_A_G57_C58	AAA	AA00	78	0.23	AA00
42	3fo4_A_C58_A59	AAA	AA00	82	0.23	AA00
43	3fo4_A_A59_C60	AAA	AA00	58	0.33	AA00
44	3fo4_A_C60_C61	AAA	AA00	85	0.16	AA00
45	3fo4_A_C61_G62	NAN	NANT	0	0.62	IC04
46	3fo4_A_G62_U63	NAN	NANT	0	0.62	OP22
47	3fo4_A_U63_A64	NAN	NANT	0	1.66	BB14
48	3fo4_A_A64_A65	A-B	AB01	9	0.37	AB01
49	3fo4_A_A65_A66	B-A	BA16	48	0.28	BA16
50	3fo4_A_A66_U67	NAN	NANT	0	0.69	AA10
51	3fo4_A_U67_G68	AAA	AA00	81	0.15	AA00
52	3fo4_A_G68_U69	AAA	AA00	88	0.16	AA00
53	3fo4_A_U69_C70	AAA	AA00	84	0.15	AA00
54	3fo4_A_C70_C71	AAA	AA08	82	0.19	AA08
55	3fo4_A_C71_G72	AAA	AA00	94	0.19	AA00
56	3fo4_A_G72_A73	NAN	NANT	0	0.49	IC04
57	3fo4_A_A73_U74	AAA	AA00	72	0.27	AA00
58	3fo4_A_U74_U75	AAA	AA00	95	0.17	AA00
59	3fo4_A_U75_A76	AAA	AA00	69	0.16	AA00
60	3fo4_A_A76_U77	AAA	AA00	88	0.14	AA00
61	3fo4_A_U77_G78	AAA	AA00	84	0.15	AA00
62	3fo4_A_G78_U79	AAA	AA00	68	0.24	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 62 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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