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Conformers: ABBIImiBZICOPNSYNN
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DNA Polymerase PolC from Geobacillus kaustophilus complex with DNA, dGTP, Mg and Zn

Results of the assignment of 28 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
013f2b_P_DG5_DA6NANNANT00.46 AB02
023f2b_P_DA6_DG7miBBB15320.36 BB15
033f2b_P_DG7_DA8NANNANT00.55 BB13
043f2b_P_DA8_DC9BBBBB01240.42 BB01
053f2b_P_DC9_DG10BBBBB00330.25 BB00
063f2b_P_DG10_DG11B12BB04710.12 BB04
073f2b_P_DG11_DG12BBBBB00470.15 BB00
083f2b_P_DG12_DC13BBBBB01160.25 BB01
093f2b_P_DC13_DA14BBBBB01490.26 BB01
103f2b_P_DA14_DA15BBBBB00740.20 BB00
113f2b_P_DA15_DC16B-ABA05850.17 BA05
123f2b_T_DA1_DT2A-BAB03300.46 AB03
133f2b_T_DT2_DA3NANNANT00.57 IC06
143f2b_T_DA3_DA4B-ABA05260.37 BA05
153f2b_T_DA4_DC5NANNANT00.64 OP29
163f2b_T_DC5_DG6BBBBB00770.29 BB00
173f2b_T_DG6_DG7BBBBB00890.16 BB00
183f2b_T_DG7_DT8B-ABA08610.43 BA08
193f2b_T_DT8_DT9A-BAB01410.24 AB01
203f2b_T_DT9_DG10BBBBB01840.18 BB01
213f2b_T_DG10_DC11BBBBB00320.39 BB00
223f2b_T_DC11_DC12BBBBB00660.18 BB00
233f2b_T_DC12_DC13BBBBB00870.23 BB00
243f2b_T_DC13_DG14B12BB04780.17 BB04
253f2b_T_DG14_DT15BBBBB00640.30 BB00
263f2b_T_DT15_DC16miBBB10370.37 BB10
273f2b_T_DC16_DT17BBwBB03130.36 BB03
283f2b_T_DT17_DC18miBBB10480.29 BB10

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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