DNATCO v4.1: results

Structure of B-DNA d(CGTTAATTAACG)2 in the presence of Manganese

Results of the assignment of 60 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	3eil_A_DG2_DT3	B-A	BA08	61	0.40	BA08
02	3eil_A_DT3_DT4	BBB	BB01	55	0.39	BB01
03	3eil_A_DT4_DA5	BBB	BB00	50	0.29	BB00
04	3eil_A_DA5_DA6	BBB	BB00	56	0.24	BB00
05	3eil_A_DA6_DT7	BBB	BB00	61	0.30	BB00
06	3eil_A_DT7_DT8	BBB	BB00	67	0.23	BB00
07	3eil_A_DT8_DA9	miB	BB15	24	0.38	BB15
08	3eil_A_DA9_DA10	BBB	BB01	41	0.24	BB01
09	3eil_A_DA10_DC11	A-B	AB03	90	0.18	AB03
10	3eil_A_DC11_DG12	NAN	NANT	0	1.27	BB04
11	3eil_B_DG2_DT3	B-A	BA05	71	0.29	BA05
12	3eil_B_DT3_DT4	BBB	BB01	48	0.38	BB01
13	3eil_B_DT4_DA5	BBB	BB00	60	0.29	BB00
14	3eil_B_DA5_DA6	BBB	BB00	77	0.19	BB00
15	3eil_B_DA6_DT7	BBB	BB00	61	0.34	BB00
16	3eil_B_DT7_DT8	BBB	BB00	87	0.19	BB00
17	3eil_B_DT8_DA9	BBB	BB00	11	0.26	BB00
18	3eil_B_DA9_DA10	BBB	BB00	14	0.24	BB00
19	3eil_B_DA10_DC11	BBB	BB00	36	0.21	BB00
20	3eil_B_DC11_DG12	NAN	NANT	0	1.39	BB04
21	3eil_C_DG2_DT3	B-A	BA05	16	0.47	BA05
22	3eil_C_DT3_DT4	BBB	BB01	36	0.39	BB01
23	3eil_C_DT4_DA5	BBB	BB00	48	0.29	BB00
24	3eil_C_DA5_DA6	BBB	BB00	62	0.23	BB00
25	3eil_C_DA6_DT7	BBB	BB00	48	0.33	BB00
26	3eil_C_DT7_DT8	BBB	BB00	89	0.16	BB00
27	3eil_C_DT8_DA9	BBB	BB00	11	0.27	BB00
28	3eil_C_DA9_DA10	B-A	BA05	82	0.21	BA05
29	3eil_C_DA10_DC11	A-B	AB01	18	0.32	AB01
30	3eil_C_DC11_DG12	NAN	NANT	0	1.30	BB04
31	3eil_D_DG2_DT3	B-A	BA01	16	0.20	BA01
32	3eil_D_DT3_DT4	BBB	BB01	35	0.40	BB01
33	3eil_D_DT4_DA5	BBB	BB00	60	0.33	BB00
34	3eil_D_DA5_DA6	BBB	BB00	84	0.18	BB00
35	3eil_D_DA6_DT7	BBB	BB00	72	0.27	BB00
36	3eil_D_DT7_DT8	BBB	BB00	59	0.25	BB00
37	3eil_D_DT8_DA9	BBB	BB00	70	0.28	BB00
38	3eil_D_DA9_DA10	BBB	BB00	28	0.25	BB00
39	3eil_D_DA10_DC11	BBB	BB00	52	0.26	BB00
40	3eil_D_DC11_DG12	NAN	NANT	0	1.35	BB04
41	3eil_E_DG2_DT3	B-A	BA05	20	0.46	BA05
42	3eil_E_DT3_DT4	BBB	BB01	30	0.40	BB01
43	3eil_E_DT4_DA5	miB	BB15	42	0.39	BB15
44	3eil_E_DA5_DA6	BBB	BB00	55	0.24	BB00
45	3eil_E_DA6_DT7	BBB	BB00	61	0.34	BB00
46	3eil_E_DT7_DT8	BBB	BB01	81	0.16	BB01
47	3eil_E_DT8_DA9	miB	BB15	59	0.35	BB15
48	3eil_E_DA9_DA10	B-A	BA05	80	0.22	BA05
49	3eil_E_DA10_DC11	BBB	BB00	13	0.25	BB00
50	3eil_E_DC11_DG12	NAN	NANT	0	1.30	BB04
51	3eil_F_DG2_DT3	B-A	BA05	40	0.30	BA05
52	3eil_F_DT3_DT4	BBB	BB01	40	0.46	BB01
53	3eil_F_DT4_DA5	BBB	BB00	64	0.31	BB00
54	3eil_F_DA5_DA6	BBB	BB00	74	0.21	BB00
55	3eil_F_DA6_DT7	BBB	BB00	68	0.30	BB00
56	3eil_F_DT7_DT8	BBB	BB00	67	0.24	BB00
57	3eil_F_DT8_DA9	BBB	BB00	69	0.26	BB00
58	3eil_F_DA9_DA10	BBB	BB00	55	0.25	BB00
59	3eil_F_DA10_DC11	BBB	BB00	63	0.21	BB00
60	3eil_F_DC11_DG12	NAN	NANT	0	0.99	IC06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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B

IC

OPN

Z

N

Results of the assignment of 60 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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