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Conformers: ABBIImiBZICOPNSYNN
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Structure of a binary complex of the R517A Pol lambda mutant

Results of the assignment of 70 detected steps in 2 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
013c5f-m1_T_DC.A1_DG.A2NANNANT00.41 AB03
023c5f-m2_T_DC.B1_DG.B2NANNANT00.41 AB03
033c5f-m1_T_DG.A2_DG.A3BBBBB00380.32 BB00
043c5f-m2_T_DG.B2_DG.B3BBBBB00380.32 BB00
053c5f-m1_T_DG.A3_DC.A4BBBBB00800.18 BB00
063c5f-m1_T_DC.A4_DC.A5NANNANT01.12 OP21
073c5f-m2_T_DC.B4_DC.B5NANNANT01.14 OP21
083c5f-m1_T_DC.A5_DG.A6BBBBB01780.24 BB01
093c5f-m2_T_DC.B5_DG.B6BBwBB16220.74 BB16
103c5f-m1_T_DG.A6_DT.A7B-ABA05770.35 BA05
113c5f-m2_T_DG.B6_DT.B7BBBBB00670.22 BB00
123c5f-m1_T_DT.A7_DA.A8NANNANT00.46 BB17
133c5f-m2_T_DT.B7_DA.B8B12BB04670.41 BB04
143c5f-m1_T_DA.A8_DC.A9NANNANT00.35 BB11
153c5f-m2_T_DA.B8_DC.B9B12BB04720.22 BB04
163c5f-m1_T_DC.A9_DT.A10B-ABA0580.32 BA05
173c5f-m2_T_DC.B9_DT.B10BBBBB00770.22 BB00
183c5f-m1_T_DT.A10_DG.A11NANNANT00.47 BB10
193c5f-m1_P_DC.A1_DA.A2BBBBB00760.34 BB00
203c5f-m2_P_DC.B1_DA.B2BBBBB00760.34 BB00
213c5f-m1_P_DA.A2_DG.A3BBBBB0180.23 BB01
223c5f-m2_P_DA.B2_DG.B3BBBBB0180.23 BB01
233c5f-m1_P_DG.A3_DT.A4B-ABA05600.20 BA05
243c5f-m2_P_DG.B3_DT.B4B-ABA05600.20 BA05
253c5f-m1_P_DT.A4_DA.A5B-ABA05550.32 BA05
263c5f-m2_P_DT.B4_DA.B5B-ABA05550.32 BA05
273c5f-m1_P_DA.A5_DC.A6BBBBB01260.39 BB01
283c5f-m2_P_DA.B5_DC.B6BBBBB01260.39 BB01
293c5f-m1_D_DG.A1_DC.A2A-BAB01210.38 AB01
303c5f-m2_D_DG.B1_DC.B2A-BAB01210.38 AB01
313c5f-m1_D_DC.A2_DC.A3BBBBB00770.14 BB00
323c5f-m2_D_DC.B2_DC.B3BBBBB00770.14 BB00
333c5f-m1_D_DC.A3_DG.A4BBBBB00150.28 BB00
343c5f-m2_D_DC.B3_DG.B4BBBBB00150.28 BB00
353c5f-m1_U_DC.A1_DG.A2NANNANT00.66 BB17
363c5f-m2_U_DC.B1_DG.B2A-BAB03360.34 AB03
373c5f-m1_U_DG.A2_DG.A3NANNANT00.48 BB17
383c5f-m2_U_DG.B2_DG.B3NANNANT00.41 BA08
393c5f-m1_U_DG.A3_DC.A4BBBBB00200.30 BB00
403c5f-m2_U_DG.B3_DC.B4NANNANT00.50 BA10
413c5f-m1_U_DC.A4_DC.A5NANNANT01.57 OP06
423c5f-m2_U_DC.B4_DC.B5NANNANT01.52 OP05
433c5f-m1_U_DC.A5_DG.A6BBBBB01160.30 BB01
443c5f-m2_U_DC.B5_DG.B6NANNANT00.60 AB05
453c5f-m1_U_DG.A6_DT.A7B-ABA05680.35 BA05
463c5f-m2_U_DG.B6_DT.B7BBBBB00690.25 BB00
473c5f-m1_U_DT.A7_DA.A8A-BAB01230.38 AB01
483c5f-m2_U_DT.B7_DA.B8NANNANT00.33 BA08
493c5f-m1_U_DA.A8_DC.A9BBwBB03550.37 BB03
503c5f-m2_U_DA.B8_DC.B9NANNANT00.74 AB02
513c5f-m1_U_DC.A9_DT.A10BBBBB00450.27 BB00
523c5f-m2_U_DC.B9_DT.B10BBwBB16290.39 BB16
533c5f-m1_U_DT.A10_DG.A11NANNANT00.37 BB11
543c5f-m2_U_DT.B10_DG.B11BBwBB02100.29 BB02
553c5f-m1_Q_DC.A1_DA.A2BBBBB00600.35 BB00
563c5f-m2_Q_DC.B1_DA.B2BBBBB00600.35 BB00
573c5f-m1_Q_DA.A2_DG.A3BBBBB01420.17 BB01
583c5f-m2_Q_DA.B2_DG.B3BBBBB01420.17 BB01
593c5f-m1_Q_DG.A3_DT.A4B-ABA05340.21 BA05
603c5f-m2_Q_DG.B3_DT.B4B-ABA05340.21 BA05
613c5f-m1_Q_DT.A4_DA.A5BBBBB01560.24 BB01
623c5f-m2_Q_DT.B4_DA.B5BBBBB01560.24 BB01
633c5f-m1_Q_DA.A5_DC.A6BBBBB00450.35 BB00
643c5f-m2_Q_DA.B5_DC.B6BBBBB00450.35 BB00
653c5f-m1_E_DG.A1_DC.A2A-BAB04490.33 AB04
663c5f-m2_E_DG.B1_DC.B2A-BAB04490.33 AB04
673c5f-m1_E_DC.A2_DC.A3BBBBB00710.15 BB00
683c5f-m2_E_DC.B2_DC.B3BBBBB00710.15 BB00
693c5f-m1_E_DC.A3_DG.A4B12BB04680.22 BB04
703c5f-m2_E_DC.B3_DG.B4B12BB04680.22 BB04
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers
δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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