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Conformers: ABBIImiBZICOPNSYNN
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Crystal Structure of Human Nucleosome Core Particle Containing H4K44Q mutation

Results of the assignment of 288 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0013azj_I_DA1_DT2miBBB13430.52 BB13
0023azj_I_DT2_DC3BBBBB0090.68 BB00
0033azj_I_DC3_DA4BB2BB07440.33 BB07
0043azj_I_DA4_DA5BBwBB02770.17 BB02
0053azj_I_DA5_DT6BBBBB00180.35 BB00
0063azj_I_DT6_DA7BB2BB07330.31 BB07
0073azj_I_DA7_DT8BBBBB00530.32 BB00
0083azj_I_DT8_DC9BBwBB02270.30 BB02
0093azj_I_DC9_DC10BBBBB00660.26 BB00
0103azj_I_DC10_DA11BBBBB00500.40 BB00
0113azj_I_DA11_DC12BBBBB00680.19 BB00
0123azj_I_DC12_DC13BBwBB02660.25 BB02
0133azj_I_DC13_DT14BBBBB00340.42 BB00
0143azj_I_DT14_DG15BB2BB07650.34 BB07
0153azj_I_DG15_DC16NANNANT00.34 BB00
0163azj_I_DC16_DA17BB2BB07230.47 BB07
0173azj_I_DA17_DG18BBwBB11590.26 BB11
0183azj_I_DG18_DA19BBBBB00550.32 BB00
0193azj_I_DA19_DT20BBBBB00640.21 BB00
0203azj_I_DT20_DT21BBwBB02370.34 BB02
0213azj_I_DT21_DC22BBwBB02440.33 BB02
0223azj_I_DC22_DT23miBBB13280.35 BB13
0233azj_I_DT23_DA24BBwBB02470.41 BB02
0243azj_I_DA24_DC25miBBB12380.47 BB12
0253azj_I_DC25_DC26BBBBB00300.51 BB00
0263azj_I_DC26_DA27BB2BB07560.29 BB07
0273azj_I_DA27_DA28BBBBB00340.22 BB00
0283azj_I_DA28_DA29NANNANT00.32 BB08
0293azj_I_DA29_DA30BBwBB02580.33 BB02
0303azj_I_DA30_DG31BBBBB00580.23 BB00
0313azj_I_DG31_DT32BBwBB02860.17 BB02
0323azj_I_DT32_DG33BBBBB00690.26 BB00
0333azj_I_DG33_DT34BBBBB00500.31 BB00
0343azj_I_DT34_DA35BBBBB00640.30 BB00
0353azj_I_DA35_DT36BBBBB00490.46 BB00
0363azj_I_DT36_DT37BBwBB02770.27 BB02
0373azj_I_DT37_DT38BBBBB00330.31 BB00
0383azj_I_DT38_DG39BBBBB00400.42 BB00
0393azj_I_DG39_DG40NANNANT00.51 BB08
0403azj_I_DG40_DA41NANNANT00.63 BB13
0413azj_I_DA41_DA42BBwBB02290.63 BB02
0423azj_I_DA42_DA43BBwBB11630.32 BB11
0433azj_I_DA43_DC44NANNANT00.49 BB15
0443azj_I_DC44_DT45BBBBB00600.19 BB00
0453azj_I_DT45_DG46BB2BB08560.47 BB08
0463azj_I_DG46_DC47BBwBB02150.42 BB02
0473azj_I_DC47_DT48BB2BB08290.64 BB08
0483azj_I_DT48_DC49BBBBB00230.33 BB00
0493azj_I_DC49_DC50BBBBB00580.23 BB00
0503azj_I_DC50_DA51BBBBB00630.20 BB00
0513azj_I_DA51_DT52NANNANT00.38 BB02
0523azj_I_DT52_DC53NANNANT00.52 BB02
0533azj_I_DC53_DA54NANNANT00.38 BB02
0543azj_I_DA54_DA55miBBB12570.47 BB12
0553azj_I_DA55_DA56NANNANT00.67 BB13
0563azj_I_DA56_DA57BBBBB00510.32 BB00
0573azj_I_DA57_DG58miBBB12210.40 BB12
0583azj_I_DG58_DG59BBwBB16720.32 BB16
0593azj_I_DG59_DC60B12BB04600.17 BB04
0603azj_I_DC60_DA61BBBBB00620.30 BB00
0613azj_I_DA61_DT62BBwBB02810.17 BB02
0623azj_I_DT62_DG63BBwBB02660.40 BB02
0633azj_I_DG63_DT64NANNANT00.37 BB02
0643azj_I_DT64_DT65BBBBB00380.26 BB00
0653azj_I_DT65_DC66BBBBB00270.22 BB00
0663azj_I_DC66_DA67BB2BB07480.28 BB07
0673azj_I_DA67_DG68miBBB15380.38 BB15
0683azj_I_DG68_DC69BB2BB07230.35 BB07
0693azj_I_DC69_DT70BBBBB00680.25 BB00
0703azj_I_DT70_DG71BBBBB00520.27 BB00
0713azj_I_DG71_DA72B12BB04350.19 BB04
0723azj_I_DA72_DA73BBwBB02570.29 BB02
0733azj_I_DA73_DT74BBBBB00600.21 BB00
0743azj_I_DT74_DT75BBBBB00450.32 BB00
0753azj_I_DT75_DC76BBBBB00510.19 BB00
0763azj_I_DC76_DA77BB2BB07750.29 BB07
0773azj_I_DA77_DG78BBBBB00390.24 BB00
0783azj_I_DG78_DC79BB2BB07330.36 BB07
0793azj_I_DC79_DT80BBBBB00520.23 BB00
0803azj_I_DT80_DG81B12BB04690.20 BB04
0813azj_I_DG81_DA82BBBBB00680.26 BB00
0823azj_I_DA82_DA83BBwBB02620.22 BB02
0833azj_I_DA83_DC84BBBBB00460.21 BB00
0843azj_I_DC84_DA85B12BB04570.22 BB04
0853azj_I_DA85_DT86BBBBB00340.25 BB00
0863azj_I_DT86_DG87BBBBB00410.20 BB00
0873azj_I_DG87_DC88NANNANT00.50 BB07
0883azj_I_DC88_DC89BBBBB00260.31 BB00
0893azj_I_DC89_DT90BB2BB07530.32 BB07
0903azj_I_DT90_DT91BBwBB02720.17 BB02
0913azj_I_DT91_DT92miBBB15620.24 BB15
0923azj_I_DT92_DT93BBwBB02260.32 BB02
0933azj_I_DT93_DG94BBBBB00310.28 BB00
0943azj_I_DG94_DA95BBBBB00560.30 BB00
0953azj_I_DA95_DT96NANNANT00.42 BB17
0963azj_I_DT96_DG97B12BB04480.27 BB04
0973azj_I_DG97_DG98BBBBB00450.23 BB00
0983azj_I_DG98_DA99BB2BB07760.35 BB07
0993azj_I_DA99_DG100NANNANT00.47 BB02
1003azj_I_DG100_DC101NANNANT00.45 BB08
1013azj_I_DC101_DA102BBBBB00520.42 BB00
1023azj_I_DA102_DG103B12BB04570.20 BB04
1033azj_I_DG103_DT104BBwBB02360.29 BB02
1043azj_I_DT104_DT105BBwBB02790.25 BB02
1053azj_I_DT105_DT106BBBBB00530.23 BB00
1063azj_I_DT106_DC107NANNANT00.37 BB00
1073azj_I_DC107_DC108NANNANT00.51 BB08
1083azj_I_DC108_DA109B12BB04380.45 BB04
1093azj_I_DA109_DA110BBBBB00530.26 BB00
1103azj_I_DA110_DA111BBBBB00570.32 BB00
1113azj_I_DA111_DT112BBBBB00650.31 BB00
1123azj_I_DT112_DA113BBBBB00680.20 BB00
1133azj_I_DA113_DC114miBBB13530.24 BB13
1143azj_I_DC114_DA115BBwBB02490.65 BB02
1153azj_I_DA115_DC116NANNANT00.56 BB02
1163azj_I_DC116_DT117BBwBB03950.17 BB03
1173azj_I_DT117_DT118NANNANT00.47 BB02
1183azj_I_DT118_DT119BBBBB00490.29 BB00
1193azj_I_DT119_DT120BBBBB00240.43 BB00
1203azj_I_DT120_DG121BBBBB00460.35 BB00
1213azj_I_DG121_DG122B12BB04490.20 BB04
1223azj_I_DG122_DT123BBBBB00460.26 BB00
1233azj_I_DT123_DA124BBBBB00250.26 BB00
1243azj_I_DA124_DG125BBwBB11550.25 BB11
1253azj_I_DG125_DA126NANNANT00.39 BB03
1263azj_I_DA126_DA127BBwBB03400.50 BB03
1273azj_I_DA127_DT128miBBB13740.27 BB13
1283azj_I_DT128_DC129NANNANT00.56 BB02
1293azj_I_DC129_DT130BB2BB07440.24 BB07
1303azj_I_DT130_DG131NANNANT00.43 BB05
1313azj_I_DG131_DC132B12BB04380.42 BB04
1323azj_I_DC132_DA133BBBBB00400.36 BB00
1333azj_I_DA133_DG134NANNANT00.54 BB02
1343azj_I_DG134_DG135BBwBB03480.35 BB03
1353azj_I_DG135_DT136BBwBB16220.56 BB16
1363azj_I_DT136_DG137BBBBB00460.25 BB00
1373azj_I_DG137_DG138BBBBB00340.38 BB00
1383azj_I_DG138_DA139BBwBB11940.25 BB11
1393azj_I_DA139_DT140BBwBB02320.35 BB02
1403azj_I_DT140_DA141BBBBB00580.23 BB00
1413azj_I_DA141_DT142BBBBB00310.25 BB00
1423azj_I_DT142_DT143BBBBB00490.22 BB00
1433azj_I_DT143_DG144BBBBB00530.29 BB00
1443azj_I_DG144_DA145BBwBB02790.14 BB02
1453azj_J_DT148_DC149BBwBB03600.42 BB03
1463azj_J_DC149_DA150BBBBB00290.51 BB00
1473azj_J_DA150_DA151BBBBB00550.39 BB00
1483azj_J_DA151_DT152BBBBB00400.37 BB00
1493azj_J_DT152_DA153BBwBB02460.35 BB02
1503azj_J_DA153_DT154BBwBB02690.27 BB02
1513azj_J_DT154_DC155BBBBB00520.31 BB00
1523azj_J_DC155_DC156BBBBB00470.32 BB00
1533azj_J_DC156_DA157BBwBB02540.28 BB02
1543azj_J_DA157_DC158BBBBB00680.23 BB00
1553azj_J_DC158_DC159BBwBB02690.25 BB02
1563azj_J_DC159_DT160BBBBB00370.34 BB00
1573azj_J_DT160_DG161BBBBB00520.33 BB00
1583azj_J_DG161_DC162NANNANT00.49 BB00
1593azj_J_DC162_DA163B12BB04220.27 BB04
1603azj_J_DA163_DG164B12BB04390.39 BB04
1613azj_J_DG164_DA165BBwBB02240.42 BB02
1623azj_J_DA165_DT166BBwBB02720.20 BB02
1633azj_J_DT166_DT167BBwBB02470.31 BB02
1643azj_J_DT167_DC168BBBBB00350.31 BB00
1653azj_J_DC168_DT169BBBBB00590.23 BB00
1663azj_J_DT169_DA170BBBBB00480.30 BB00
1673azj_J_DA170_DC171BBwBB02350.39 BB02
1683azj_J_DC171_DC172BBwBB03600.32 BB03
1693azj_J_DC172_DA173NANNANT00.62 BB11
1703azj_J_DA173_DA174BBBBB00430.32 BB00
1713azj_J_DA174_DA175B12BB05650.28 BB05
1723azj_J_DA175_DA176BBBBB00410.37 BB00
1733azj_J_DA176_DG177BBBBB00660.31 BB00
1743azj_J_DG177_DT178BBwBB02590.21 BB02
1753azj_J_DT178_DG179BBBBB00600.30 BB00
1763azj_J_DG179_DT180BBwBB02400.28 BB02
1773azj_J_DT180_DA181BBBBB00620.21 BB00
1783azj_J_DA181_DT182BBwBB02570.26 BB02
1793azj_J_DT182_DT183BBBBB00600.30 BB00
1803azj_J_DT183_DT184BBBBB00530.17 BB00
1813azj_J_DT184_DG185BB2BB07610.30 BB07
1823azj_J_DG185_DG186BBBBB00310.31 BB00
1833azj_J_DG186_DA187BB2BB07420.39 BB07
1843azj_J_DA187_DA188miBBB13930.22 BB13
1853azj_J_DA188_DA189BBBBB0090.56 BB00
1863azj_J_DA189_DC190miBBB13500.24 BB13
1873azj_J_DC190_DT191BBBBB00270.55 BB00
1883azj_J_DT191_DG192BB2BB07520.27 BB07
1893azj_J_DG192_DC193NANNANT00.42 BB02
1903azj_J_DC193_DT194BB2BB07170.37 BB07
1913azj_J_DT194_DC195BBBBB00250.28 BB00
1923azj_J_DC195_DC196BB2BB07410.28 BB07
1933azj_J_DC196_DA197BBBBB00760.22 BB00
1943azj_J_DA197_DT198BBwBB02820.15 BB02
1953azj_J_DT198_DC199BBBBB00390.21 BB00
1963azj_J_DC199_DA200BBwBB02520.26 BB02
1973azj_J_DA200_DA201NANNANT00.39 BB02
1983azj_J_DA201_DA202BBBBB00470.31 BB00
1993azj_J_DA202_DA203BBBBB00500.20 BB00
2003azj_J_DA203_DG204B12BB04340.31 BB04
2013azj_J_DG204_DG205BB2BB07750.29 BB07
2023azj_J_DG205_DC206BBwBB02510.28 BB02
2033azj_J_DC206_DA207B12BB04130.26 BB04
2043azj_J_DA207_DT208BBwBB02840.17 BB02
2053azj_J_DT208_DG209BBwBB02690.38 BB02
2063azj_J_DG209_DT210BBBBB00420.26 BB00
2073azj_J_DT210_DT211BBBBB00550.21 BB00
2083azj_J_DT211_DC212BBwBB02660.20 BB02
2093azj_J_DC212_DA213BBBBB00420.34 BB00
2103azj_J_DA213_DG214BB2BB07250.33 BB07
2113azj_J_DG214_DC215BBBBB00390.24 BB00
2123azj_J_DC215_DT216BB2BB07530.24 BB07
2133azj_J_DT216_DG217B12BB04590.30 BB04
2143azj_J_DG217_DA218BBBBB00650.21 BB00
2153azj_J_DA218_DA219BBwBB02360.43 BB02
2163azj_J_DA219_DT220BBwBB02750.37 BB02
2173azj_J_DT220_DT221BBwBB02780.23 BB02
2183azj_J_DT221_DC222BBBBB00440.26 BB00
2193azj_J_DC222_DA223B12BB04490.29 BB04
2203azj_J_DA223_DG224B12BB04750.27 BB04
2213azj_J_DG224_DC225BBBBB00450.21 BB00
2223azj_J_DC225_DT226BB2BB07470.25 BB07
2233azj_J_DT226_DG227B12BB04410.30 BB04
2243azj_J_DG227_DA228B12BB04550.27 BB04
2253azj_J_DA228_DA229BBBBB00710.18 BB00
2263azj_J_DA229_DC230BBwBB02430.22 BB02
2273azj_J_DC230_DA231B12BB04440.38 BB04
2283azj_J_DA231_DT232BBwBB02390.23 BB02
2293azj_J_DT232_DG233BBBBB00580.30 BB00
2303azj_J_DG233_DC234BBBBB00230.47 BB00
2313azj_J_DC234_DC235B12BB04420.29 BB04
2323azj_J_DC235_DT236BB2BB07730.21 BB07
2333azj_J_DT236_DT237BBBBB00550.29 BB00
2343azj_J_DT237_DT238BBBBB00540.21 BB00
2353azj_J_DT238_DT239NANNANT00.28 BB00
2363azj_J_DT239_DG240NANNANT00.50 BB02
2373azj_J_DG240_DA241NANNANT00.55 BB08
2383azj_J_DA241_DT242NANNANT00.48 BB02
2393azj_J_DT242_DG243BBBBB00180.34 BB00
2403azj_J_DG243_DG244BBBBB00110.53 BB00
2413azj_J_DG244_DA245BBBBB00500.28 BB00
2423azj_J_DA245_DG246B12BB04480.38 BB04
2433azj_J_DG246_DC247BBwBB02590.21 BB02
2443azj_J_DC247_DA248BB2BB08210.53 BB08
2453azj_J_DA248_DG249NANNANT00.60 BB02
2463azj_J_DG249_DT250BBwBB02640.27 BB02
2473azj_J_DT250_DT251NANNANT00.66 BB02
2483azj_J_DT251_DT252NANNANT00.59 BB02
2493azj_J_DT252_DC253miBBB13670.34 BB13
2503azj_J_DC253_DC254NANNANT00.62 BB03
2513azj_J_DC254_DA255BB2BB07320.37 BB07
2523azj_J_DA255_DA256BBBBB00370.42 BB00
2533azj_J_DA256_DA257BBBBB00310.37 BB00
2543azj_J_DA257_DT258BBwBB11760.25 BB11
2553azj_J_DT258_DA259BBBBB00610.30 BB00
2563azj_J_DA259_DC260BBwBB02860.17 BB02
2573azj_J_DC260_DA261BBBBB00580.30 BB00
2583azj_J_DA261_DC262NANNANT00.47 BB02
2593azj_J_DC262_DT263BBBBB00440.37 BB00
2603azj_J_DT263_DT264miBBB13540.34 BB13
2613azj_J_DT264_DT265BBBBB00220.39 BB00
2623azj_J_DT265_DT266miBBB13850.24 BB13
2633azj_J_DT266_DG267NANNANT00.67 BB16
2643azj_J_DG267_DG268BBwBB02480.29 BB02
2653azj_J_DG268_DT269BBBBB00580.33 BB00
2663azj_J_DT269_DA270B12BB04580.29 BB04
2673azj_J_DA270_DG271miBBB13420.26 BB13
2683azj_J_DG271_DA272BBwBB03420.31 BB03
2693azj_J_DA272_DA273BBBBB00320.35 BB00
2703azj_J_DA273_DT274BBBBB00660.27 BB00
2713azj_J_DT274_DC275BBwBB02530.34 BB02
2723azj_J_DC275_DT276BBwBB02450.38 BB02
2733azj_J_DT276_DG277NANNANT00.50 BB08
2743azj_J_DG277_DC278BBBBB00210.42 BB00
2753azj_J_DC278_DA279BB2BB07660.27 BB07
2763azj_J_DA279_DG280BBBBB00160.36 BB00
2773azj_J_DG280_DG281NANNANT00.54 BB10
2783azj_J_DG281_DT282BBwBB02450.23 BB02
2793azj_J_DT282_DG283NANNANT00.37 BB02
2803azj_J_DG283_DG284BBwBB11720.42 BB11
2813azj_J_DG284_DA285NANNANT00.53 BB16
2823azj_J_DA285_DT286NANNANT00.82 BB07
2833azj_J_DT286_DA287miBBB12510.39 BB12
2843azj_J_DA287_DT288BBwBB16410.46 BB16
2853azj_J_DT288_DT289BBwBB02730.18 BB02
2863azj_J_DT289_DG290BBBBB00520.31 BB00
2873azj_J_DG290_DA291B12BB04540.23 BB04
2883azj_J_DA291_DT292BBBBB00180.18 BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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