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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Crystal Structure of Human Nucleosome Core Particle Containing H3K64Q mutation

Results of the assignment of 288 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0013aze_I_DA1_DT2NANNANT00.36 BB13
0023aze_I_DT2_DC3NANNANT00.35 BB03
0033aze_I_DC3_DA4NANNANT00.64 BB13
0043aze_I_DA4_DA5BBBBB00260.42 BB00
0053aze_I_DA5_DT6miBBB13370.27 BB13
0063aze_I_DT6_DA7miBBB13310.40 BB13
0073aze_I_DA7_DT8BBBBB00150.49 BB00
0083aze_I_DT8_DC9BBwBB02700.26 BB02
0093aze_I_DC9_DC10BBwBB02760.38 BB02
0103aze_I_DC10_DA11BBwBB02670.39 BB02
0113aze_I_DA11_DC12BBwBB03880.28 BB03
0123aze_I_DC12_DC13NANNANT00.61 BB02
0133aze_I_DC13_DT14NANNANT00.63 BB02
0143aze_I_DT14_DG15BBwBB11380.71 BB11
0153aze_I_DG15_DC16BBwBB03470.50 BB03
0163aze_I_DC16_DA17NANNANT00.82 BB08
0173aze_I_DA17_DG18miBBB13190.59 BB13
0183aze_I_DG18_DA19NANNANT00.29 BB03
0193aze_I_DA19_DT20NANNANT00.41 BB13
0203aze_I_DT20_DT21BBwBB03620.36 BB03
0213aze_I_DT21_DC22NANNANT00.41 BB02
0223aze_I_DC22_DT23miBBB13550.32 BB13
0233aze_I_DT23_DA24NANNANT00.51 BB02
0243aze_I_DA24_DC25miBBB13480.40 BB13
0253aze_I_DC25_DC26BBwBB03580.27 BB03
0263aze_I_DC26_DA27NANNANT00.71 BB08
0273aze_I_DA27_DA28BBwBB03580.21 BB03
0283aze_I_DA28_DA29BB2BB08320.41 BB08
0293aze_I_DA29_DA30BBwBB03790.24 BB03
0303aze_I_DA30_DG31BBBBB00400.32 BB00
0313aze_I_DG31_DT32miBBB13520.26 BB13
0323aze_I_DT32_DG33NANNANT00.69 BB13
0333aze_I_DG33_DT34BBwBB03150.29 BB03
0343aze_I_DT34_DA35BBwBB02440.33 BB02
0353aze_I_DA35_DT36BBwBB02770.21 BB02
0363aze_I_DT36_DT37BBBBB00530.35 BB00
0373aze_I_DT37_DT38miBBB12490.53 BB12
0383aze_I_DT38_DG39NANNANT01.15 BB02
0393aze_I_DG39_DG40BBwBB11920.34 BB11
0403aze_I_DG40_DA41NANNANT00.55 BB1S
0413aze_I_DA41_DA42NANNANT00.63 BB03
0423aze_I_DA42_DA43BBBBB00590.27 BB00
0433aze_I_DA43_DC44NANNANT00.40 BB13
0443aze_I_DC44_DT45NANNANT00.35 BB17
0453aze_I_DT45_DG46BB2BB08570.59 BB08
0463aze_I_DG46_DC47BBBBB00120.47 BB00
0473aze_I_DC47_DT48NANNANT00.45 BB05
0483aze_I_DT48_DC49BBBBB00550.30 BB00
0493aze_I_DC49_DC50BBBBB00550.32 BB00
0503aze_I_DC50_DA51miBBB13690.27 BB13
0513aze_I_DA51_DT52NANNANT00.65 BB02
0523aze_I_DT52_DC53BBwBB02440.41 BB02
0533aze_I_DC53_DA54BBwBB02330.27 BB02
0543aze_I_DA54_DA55miBBB13610.30 BB13
0553aze_I_DA55_DA56NANNANT00.71 BB02
0563aze_I_DA56_DA57miBBB13280.51 BB13
0573aze_I_DA57_DG58BBBBB00590.28 BB00
0583aze_I_DG58_DG59miBBB13680.33 BB13
0593aze_I_DG59_DC60BBBBB00300.43 BB00
0603aze_I_DC60_DA61BBBBB00610.31 BB00
0613aze_I_DA61_DT62miBBB13740.19 BB13
0623aze_I_DT62_DG63NANNANT00.58 BB13
0633aze_I_DG63_DT64NANNANT00.62 BB13
0643aze_I_DT64_DT65NANNANT00.61 BB13
0653aze_I_DT65_DC66NANNANT00.56 BB03
0663aze_I_DC66_DA67BB2BB07460.35 BB07
0673aze_I_DA67_DG68BBwBB03480.19 BB03
0683aze_I_DG68_DC69NANNANT00.62 BB07
0693aze_I_DC69_DT70BBBBB00570.30 BB00
0703aze_I_DT70_DG71BBwBB02500.31 BB02
0713aze_I_DG71_DA72miBBB13390.35 BB13
0723aze_I_DA72_DA73BBwBB03340.51 BB03
0733aze_I_DA73_DT74NANNANT00.62 BB02
0743aze_I_DT74_DT75BBwBB03410.42 BB03
0753aze_I_DT75_DC76BBBBB00230.32 BB00
0763aze_I_DC76_DA77B12BB04600.36 BB04
0773aze_I_DA77_DG78BBBBB00460.31 BB00
0783aze_I_DG78_DC79B12BB04390.39 BB04
0793aze_I_DC79_DT80miBBB13710.17 BB13
0803aze_I_DT80_DG81BBBBB00490.49 BB00
0813aze_I_DG81_DA82BBBBB00250.37 BB00
0823aze_I_DA82_DA83NANNANT00.38 BB03
0833aze_I_DA83_DC84miBBB13360.42 BB13
0843aze_I_DC84_DA85NANNANT00.50 BB03
0853aze_I_DA85_DT86BBBBB00360.35 BB00
0863aze_I_DT86_DG87BBBBB00480.19 BB00
0873aze_I_DG87_DC88NANNANT00.65 BB08
0883aze_I_DC88_DC89miBBB15410.44 BB15
0893aze_I_DC89_DT90BBBBB00430.55 BB00
0903aze_I_DT90_DT91miBBB13920.17 BB13
0913aze_I_DT91_DT92BBBBB00110.56 BB00
0923aze_I_DT92_DT93BBwBB02670.25 BB02
0933aze_I_DT93_DG94NANNANT00.75 BB02
0943aze_I_DG94_DA95NANNANT00.52 BB08
0953aze_I_DA95_DT96BBwBB02410.35 BB02
0963aze_I_DT96_DG97miBBB13800.35 BB13
0973aze_I_DG97_DG98NANNANT00.69 BB02
0983aze_I_DG98_DA99miBBB13200.69 BB13
0993aze_I_DA99_DG100NANNANT00.97 BB12
1003aze_I_DG100_DC101BBwBB02500.41 BB02
1013aze_I_DC101_DA102BBwBB02140.49 BB02
1023aze_I_DA102_DG103miBBB13910.31 BB13
1033aze_I_DG103_DT104BBBBB00110.64 BB00
1043aze_I_DT104_DT105NANNANT00.59 BB13
1053aze_I_DT105_DT106NANNANT00.60 BB03
1063aze_I_DT106_DC107NANNANT00.92 BB07
1073aze_I_DC107_DC108NANNANT00.54 BB13
1083aze_I_DC108_DA109BBBBB00350.40 BB00
1093aze_I_DA109_DA110BBwBB02600.21 BB02
1103aze_I_DA110_DA111BBBBB00660.23 BB00
1113aze_I_DA111_DT112BBBBB00600.33 BB00
1123aze_I_DT112_DA113BBwBB02750.17 BB02
1133aze_I_DA113_DC114BBwBB02580.35 BB02
1143aze_I_DC114_DA115BBBBB00370.31 BB00
1153aze_I_DA115_DC116BBwBB03500.40 BB03
1163aze_I_DC116_DT117BBBBB00450.35 BB00
1173aze_I_DT117_DT118BBBBB00560.39 BB00
1183aze_I_DT118_DT119BBwBB02670.32 BB02
1193aze_I_DT119_DT120NANNANT00.53 BB02
1203aze_I_DT120_DG121BBBBB00230.53 BB00
1213aze_I_DG121_DG122BBBBB00210.30 BB00
1223aze_I_DG122_DT123BBBBB00270.42 BB00
1233aze_I_DT123_DA124miBBB12420.53 BB12
1243aze_I_DA124_DG125BBwBB03690.27 BB03
1253aze_I_DG125_DA126BBwBB03820.22 BB03
1263aze_I_DA126_DA127miBBB13340.36 BB13
1273aze_I_DA127_DT128NANNANT00.29 BB03
1283aze_I_DT128_DC129NANNANT00.49 BB02
1293aze_I_DC129_DT130BB2BB07290.46 BB07
1303aze_I_DT130_DG131BBwBB02640.22 BB02
1313aze_I_DG131_DC132NANNANT00.57 BB11
1323aze_I_DC132_DA133BBwBB02380.73 BB02
1333aze_I_DA133_DG134BBwBB03430.28 BB03
1343aze_I_DG134_DG135NANNANT00.44 BB00
1353aze_I_DG135_DT136BBwBB02690.29 BB02
1363aze_I_DT136_DG137BBBBB00570.35 BB00
1373aze_I_DG137_DG138BBwBB11680.43 BB11
1383aze_I_DG138_DA139BBwBB02140.44 BB02
1393aze_I_DA139_DT140NANNANT00.43 BB00
1403aze_I_DT140_DA141miBBB12560.32 BB12
1413aze_I_DA141_DT142BBwBB03760.26 BB03
1423aze_I_DT142_DT143BBwBB02420.50 BB02
1433aze_I_DT143_DG144B12BB04570.23 BB04
1443aze_I_DG144_DA145BBwBB03550.33 BB03
1453aze_I_DA145_DT146NANNANT01.14 IC03
1463aze_J_DC149_DA150NANNANT00.85 BB13
1473aze_J_DA150_DA151BBwBB11570.50 BB11
1483aze_J_DA151_DT152NANNANT00.53 BB02
1493aze_J_DT152_DA153BBwBB03770.31 BB03
1503aze_J_DA153_DT154BBBBB00330.33 BB00
1513aze_J_DT154_DC155BBwBB02530.19 BB02
1523aze_J_DC155_DC156BBBBB00650.25 BB00
1533aze_J_DC156_DA157BBwBB11680.38 BB11
1543aze_J_DA157_DC158BBBBB00470.32 BB00
1553aze_J_DC158_DC159NANNANT01.01 AB02
1563aze_J_DC159_DT160miBBB13360.46 BB13
1573aze_J_DT160_DG161NANNANT00.62 BB13
1583aze_J_DG161_DC162BBwBB03140.64 BB03
1593aze_J_DC162_DA163BBBBB00550.24 BB00
1603aze_J_DA163_DG164BB2BB07590.41 BB07
1613aze_J_DG164_DA165BBwBB03230.36 BB03
1623aze_J_DA165_DT166miBBB12270.53 BB12
1633aze_J_DT166_DT167NANNANT00.54 BB03
1643aze_J_DT167_DC168NANNANT00.56 BB02
1653aze_J_DC168_DT169BBBBB00330.36 BB00
1663aze_J_DT169_DA170NANNANT00.27 BB02
1673aze_J_DA170_DC171miBBB13590.33 BB13
1683aze_J_DC171_DC172BBwBB03760.34 BB03
1693aze_J_DC172_DA173NANNANT00.58 BB11
1703aze_J_DA173_DA174BBwBB03830.21 BB03
1713aze_J_DA174_DA175NANNANT00.59 BB12
1723aze_J_DA175_DA176BBwBB03280.44 BB03
1733aze_J_DA176_DG177BBBBB00640.26 BB00
1743aze_J_DG177_DT178BBBBB00460.39 BB00
1753aze_J_DT178_DG179miBBB13840.22 BB13
1763aze_J_DG179_DT180NANNANT00.52 BB17
1773aze_J_DT180_DA181NANNANT00.57 BB00
1783aze_J_DA181_DT182BBBBB00470.33 BB00
1793aze_J_DT182_DT183BBBBB00700.27 BB00
1803aze_J_DT183_DT184BBBBB00350.51 BB00
1813aze_J_DT184_DG185NANNANT00.58 BB13
1823aze_J_DG185_DG186BBwBB16490.33 BB16
1833aze_J_DG186_DA187BB2BB07610.25 BB07
1843aze_J_DA187_DA188miBBB13530.31 BB13
1853aze_J_DA188_DA189NANNANT00.75 BB02
1863aze_J_DA189_DC190NANNANT00.38 BB13
1873aze_J_DC190_DT191BBwBB03480.35 BB03
1883aze_J_DT191_DG192NANNANT00.66 BB12
1893aze_J_DG192_DC193BBBBB00290.50 BB00
1903aze_J_DC193_DT194NANNANT00.57 BB02
1913aze_J_DT194_DC195NANNANT00.41 BB03
1923aze_J_DC195_DC196BBBBB00760.21 BB00
1933aze_J_DC196_DA197BBBBB00700.22 BB00
1943aze_J_DA197_DT198miBBB12120.54 BB12
1953aze_J_DT198_DC199BBwBB02480.51 BB02
1963aze_J_DC199_DA200BBBBB00610.33 BB00
1973aze_J_DA200_DA201miBBB12190.43 BB12
1983aze_J_DA201_DA202NANNANT00.52 BB03
1993aze_J_DA202_DA203BBwBB02550.47 BB02
2003aze_J_DA203_DG204NANNANT00.67 AB02
2013aze_J_DG204_DG205NANNANT00.79 BB08
2023aze_J_DG205_DC206BBwBB02230.54 BB02
2033aze_J_DC206_DA207BBwBB11780.29 BB11
2043aze_J_DA207_DT208miBBB15630.30 BB15
2053aze_J_DT208_DG209BBwBB02370.26 BB02
2063aze_J_DG209_DT210BBBBB00520.25 BB00
2073aze_J_DT210_DT211miBBB12290.45 BB12
2083aze_J_DT211_DC212miBBB15280.63 BB15
2093aze_J_DC212_DA213B12BB04450.28 BB04
2103aze_J_DA213_DG214BBBBB00350.52 BB00
2113aze_J_DG214_DC215BBwBB02300.29 BB02
2123aze_J_DC215_DT216NANNANT00.48 BB08
2133aze_J_DT216_DG217BBBBB00680.36 BB00
2143aze_J_DG217_DA218BBBBB00550.30 BB00
2153aze_J_DA218_DA219BBwBB02610.25 BB02
2163aze_J_DA219_DT220BBwBB02640.23 BB02
2173aze_J_DT220_DT221miBBB13820.24 BB13
2183aze_J_DT221_DC222NANNANT00.55 BB03
2193aze_J_DC222_DA223BBBBB00460.44 BB00
2203aze_J_DA223_DG224NANNANT00.34 BB07
2213aze_J_DG224_DC225miBBB12620.31 BB12
2223aze_J_DC225_DT226NANNANT00.44 BB13
2233aze_J_DT226_DG227NANNANT00.86 BB13
2243aze_J_DG227_DA228BBwBB11480.51 BB11
2253aze_J_DA228_DA229BBBBB00490.35 BB00
2263aze_J_DA229_DC230BBBBB00150.35 BB00
2273aze_J_DC230_DA231BBwBB02280.43 BB02
2283aze_J_DA231_DT232BBwBB03890.18 BB03
2293aze_J_DT232_DG233BBwBB02490.46 BB02
2303aze_J_DG233_DC234miBBB13780.24 BB13
2313aze_J_DC234_DC235BBBBB00130.41 BB00
2323aze_J_DC235_DT236NANNANT00.53 BB02
2333aze_J_DT236_DT237BBwBB11350.37 BB11
2343aze_J_DT237_DT238BBBBB00450.35 BB00
2353aze_J_DT238_DT239NANNANT00.39 BB11
2363aze_J_DT239_DG240NANNANT00.43 BB17
2373aze_J_DG240_DA241NANNANT00.64 BB02
2383aze_J_DA241_DT242BBwBB02360.40 BB02
2393aze_J_DT242_DG243miBBB13460.40 BB13
2403aze_J_DG243_DG244NANNANT00.44 BB17
2413aze_J_DG244_DA245BBBBB00240.46 BB00
2423aze_J_DA245_DG246BB2BB07840.33 BB07
2433aze_J_DG246_DC247BBwBB02690.20 BB02
2443aze_J_DC247_DA248BBwBB11500.60 BB11
2453aze_J_DA248_DG249NANNANT00.67 BB02
2463aze_J_DG249_DT250NANNANT00.41 BB03
2473aze_J_DT250_DT251NANNANT00.46 BB13
2483aze_J_DT251_DT252NANNANT00.75 BB03
2493aze_J_DT252_DC253NANNANT00.74 BB02
2503aze_J_DC253_DC254BBwBB03410.41 BB03
2513aze_J_DC254_DA255BB2BB07730.39 BB07
2523aze_J_DA255_DA256BBBBB00650.25 BB00
2533aze_J_DA256_DA257miBBB12350.42 BB12
2543aze_J_DA257_DT258NANNANT00.71 BB13
2553aze_J_DT258_DA259NANNANT00.31 BB03
2563aze_J_DA259_DC260NANNANT00.58 BB02
2573aze_J_DC260_DA261BBBBB00420.49 BB00
2583aze_J_DA261_DC262BBwBB02370.41 BB02
2593aze_J_DC262_DT263BBBBB00440.34 BB00
2603aze_J_DT263_DT264BBwBB02700.33 BB02
2613aze_J_DT264_DT265BBwBB03890.23 BB03
2623aze_J_DT265_DT266NANNANT00.35 BB13
2633aze_J_DT266_DG267NANNANT00.72 BB04
2643aze_J_DG267_DG268NANNANT00.41 BB03
2653aze_J_DG268_DT269BBBBB00610.34 BB00
2663aze_J_DT269_DA270BBBBB00270.32 BB00
2673aze_J_DA270_DG271NANNANT00.27 BB02
2683aze_J_DG271_DA272BBBBB00460.26 BB00
2693aze_J_DA272_DA273miBBB13690.32 BB13
2703aze_J_DA273_DT274BBwBB03310.41 BB03
2713aze_J_DT274_DC275NANNANT00.59 BB02
2723aze_J_DC275_DT276NANNANT00.33 BB16
2733aze_J_DT276_DG277NANNANT00.66 BB08
2743aze_J_DG277_DC278miBBB13280.45 BB13
2753aze_J_DC278_DA279NANNANT00.55 BB08
2763aze_J_DA279_DG280NANNANT00.52 BB13
2773aze_J_DG280_DG281BBwBB02450.55 BB02
2783aze_J_DG281_DT282BBBBB00440.29 BB00
2793aze_J_DT282_DG283BBBBB00460.31 BB00
2803aze_J_DG283_DG284BBwBB11680.35 BB11
2813aze_J_DG284_DA285miBBB13320.41 BB13
2823aze_J_DA285_DT286NANNANT00.46 BB13
2833aze_J_DT286_DA287NANNANT00.68 BB02
2843aze_J_DA287_DT288miBBB13440.40 BB13
2853aze_J_DT288_DT289BBwBB02190.44 BB02
2863aze_J_DT289_DG290BBBBB00590.25 BB00
2873aze_J_DG290_DA291B12BB05680.28 BB05
2883aze_J_DA291_DT292BBwBB03560.36 BB03

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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