DNATCO v4.1: results

Structure A of CRISPR endoribonuclease Cse3 bound to 19 nt RNA

Results of the assignment of 136 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2y9h_B_U5_C6	NAN	NANT	0	1.16	AA11
002	2y9h_B_C6_C7	AAA	AA00	72	0.20	AA00
003	2y9h_B_C7_C8	AAA	AA00	81	0.14	AA00
004	2y9h_B_C8_C9	AAA	AA00	42	0.17	AA00
005	2y9h_B_C9_A10	AAA	AA00	14	0.17	AA00
006	2y9h_B_A10_C11	AAw	AA10	20	0.24	AA10
007	2y9h_B_C11_G12	AAA	AA04	53	0.42	AA04
008	2y9h_B_G12_C13	NAN	NANT	0	1.82	IC01
009	2y9h_B_C13_G14	NAN	NANT	0	0.74	OP20
010	2y9h_B_G14_U15	NAN	NANT	0	0.96	OP13
011	2y9h_B_U15_G16	NAN	NANT	0	1.62	OP17
012	2y9h_B_G16_U17	AAA	AA00	53	0.24	AA00
013	2y9h_B_U17_G18	AAA	AA00	80	0.15	AA00
014	2y9h_B_G18_G19	AAA	AA00	63	0.14	AA00
015	2y9h_B_G19_G20	AAA	AA00	66	0.23	AA00
016	2y9h_B_G20_DG21	AAA	AA00	74	0.29	AA00
017	2y9h_B_DG21_A22	NAN	NANT	0	0.59	BB03
018	2y9h_D_U5_C6	NAN	NANT	0	0.30	AA04
019	2y9h_D_C6_C7	AAA	AA00	55	0.20	AA00
020	2y9h_D_C7_C8	AAA	AA03	76	0.19	AA03
021	2y9h_D_C8_C9	AAA	AA00	83	0.20	AA00
022	2y9h_D_C9_A10	AAA	AA04	84	0.22	AA04
023	2y9h_D_A10_C11	AAA	AA00	80	0.26	AA00
024	2y9h_D_C11_G12	AAw	AA01	24	0.32	AA01
025	2y9h_D_G12_C13	NAN	NANT	0	0.68	AA06
026	2y9h_D_C13_G14	NAN	NANT	0	1.86	OP28
027	2y9h_D_G14_U15	NAN	NANT	0	0.62	OP20
028	2y9h_D_U15_G16	NAN	NANT	0	1.39	OP27
029	2y9h_D_G16_U17	AAA	AA00	46	0.27	AA00
030	2y9h_D_U17_G18	AAA	AA08	83	0.18	AA08
031	2y9h_D_G18_G19	AAA	AA00	90	0.11	AA00
032	2y9h_D_G19_G20	AAA	AA00	45	0.32	AA00
033	2y9h_D_G20_DG21	AAw	AA01	56	0.23	AA01
034	2y9h_D_DG21_A22	NAN	NANT	0	0.28	AB05
035	2y9h_F_U5_C6	NAN	NANT	0	1.21	AA10
036	2y9h_F_C6_C7	AAA	AA00	73	0.21	AA00
037	2y9h_F_C7_C8	AAA	AA00	40	0.19	AA00
038	2y9h_F_C8_C9	AAA	AA00	62	0.16	AA00
039	2y9h_F_C9_A10	AAA	AA00	84	0.15	AA00
040	2y9h_F_A10_C11	AAw	AA10	75	0.17	AA10
041	2y9h_F_C11_G12	AAA	AA03	68	0.28	AA03
042	2y9h_F_G12_C13	NAN	NANT	0	0.61	OP29
043	2y9h_F_C13_G14	NAN	NANT	0	0.95	OP20
044	2y9h_F_G14_U15	NAN	NANT	0	2.21	OP16
045	2y9h_F_U15_G16	NAN	NANT	0	1.42	OP27
046	2y9h_F_G16_U17	AAA	AA00	53	0.24	AA00
047	2y9h_F_U17_G18	AAA	AA00	75	0.17	AA00
048	2y9h_F_G18_G19	AAA	AA00	86	0.13	AA00
049	2y9h_F_G19_G20	AAA	AA00	91	0.16	AA00
050	2y9h_F_G20_DG21	AAA	AA00	93	0.25	AA00
051	2y9h_F_DG21_A22	A-B	AB05	44	0.28	AB05
052	2y9h_H_U5_C6	NAN	NANT	0	0.68	AA01
053	2y9h_H_C6_C7	AAA	AA00	92	0.15	AA00
054	2y9h_H_C7_C8	AAA	AA00	86	0.16	AA00
055	2y9h_H_C8_C9	AAA	AA00	76	0.12	AA00
056	2y9h_H_C9_A10	AAA	AA00	75	0.10	AA00
057	2y9h_H_A10_C11	AAw	AA06	73	0.28	AA06
058	2y9h_H_C11_G12	NAN	NANT	0	0.55	AA05
059	2y9h_H_G12_C13	A-B	AB05	31	0.34	AB05
060	2y9h_H_C13_G14	NAN	NANT	0	1.07	OP18
061	2y9h_H_G14_U15	NAN	NANT	0	0.68	OP20
062	2y9h_H_U15_G16	NAN	NANT	0	1.68	BB03
063	2y9h_H_G16_U17	AAA	AA00	79	0.21	AA00
064	2y9h_H_U17_G18	AAA	AA08	80	0.17	AA08
065	2y9h_H_G18_G19	AAA	AA00	77	0.15	AA00
066	2y9h_H_G19_G20	AAA	AA00	74	0.22	AA00
067	2y9h_H_G20_DG21	AAw	AA01	60	0.18	AA01
068	2y9h_H_DG21_A22	A-B	AB05	76	0.25	AB05
069	2y9h_J_U5_C6	AAA	AA03	84	0.16	AA03
070	2y9h_J_C6_C7	AAA	AA00	76	0.12	AA00
071	2y9h_J_C7_C8	AAA	AA00	75	0.16	AA00
072	2y9h_J_C8_C9	AAA	AA00	54	0.20	AA00
073	2y9h_J_C9_A10	AAA	AA00	69	0.21	AA00
074	2y9h_J_A10_C11	AAA	AA08	85	0.17	AA08
075	2y9h_J_C11_G12	AAA	AA04	88	0.20	AA04
076	2y9h_J_G12_C13	NAN	NANT	0	0.83	OP29
077	2y9h_J_C13_G14	NAN	NANT	0	0.90	OP22
078	2y9h_J_G14_U15	NAN	NANT	0	1.62	IC07
079	2y9h_J_U15_G16	NAN	NANT	0	1.92	OP1S
080	2y9h_J_G16_U17	SYN	AAS1	85	0.24	AAS1
081	2y9h_J_U17_G18	AAA	AA00	87	0.12	AA00
082	2y9h_J_G18_G19	AAA	AA08	80	0.22	AA08
083	2y9h_J_G19_G20	AAA	AA00	80	0.17	AA00
084	2y9h_J_G20_DG21	AAA	AA00	71	0.35	AA00
085	2y9h_J_DG21_A22	NAN	NANT	0	0.43	AB03
086	2y9h_L_U5_C6	NAN	NANT	0	1.16	BB02
087	2y9h_L_C6_C7	AAA	AA04	89	0.19	AA04
088	2y9h_L_C7_C8	AAA	AA03	85	0.15	AA03
089	2y9h_L_C8_C9	AAA	AA08	79	0.24	AA08
090	2y9h_L_C9_A10	AAA	AA08	58	0.31	AA08
091	2y9h_L_A10_C11	AAA	AA08	81	0.20	AA08
092	2y9h_L_C11_G12	AAA	AA00	85	0.22	AA00
093	2y9h_L_G12_C13	NAN	NANT	0	0.78	OP29
094	2y9h_L_C13_G14	NAN	NANT	0	0.75	OP22
095	2y9h_L_G14_U15	NAN	NANT	0	1.22	IC07
096	2y9h_L_U15_G16	NAN	NANT	0	1.18	OP17
097	2y9h_L_G16_U17	AAA	AA00	80	0.14	AA00
098	2y9h_L_U17_G18	AAA	AA00	74	0.15	AA00
099	2y9h_L_G18_G19	AAA	AA08	79	0.21	AA08
100	2y9h_L_G19_G20	AAA	AA00	62	0.18	AA00
101	2y9h_L_G20_DG21	AAA	AA00	54	0.32	AA00
102	2y9h_L_DG21_A22	NAN	NANT	0	0.40	AA01
103	2y9h_N_U5_C6	AAA	AA08	95	0.16	AA08
104	2y9h_N_C6_C7	AAA	AA00	83	0.17	AA00
105	2y9h_N_C7_C8	AAA	AA00	67	0.16	AA00
106	2y9h_N_C8_C9	AAA	AA00	91	0.15	AA00
107	2y9h_N_C9_A10	AAA	AA00	67	0.16	AA00
108	2y9h_N_A10_C11	AAw	AA10	90	0.12	AA10
109	2y9h_N_C11_G12	AAA	AA00	58	0.36	AA00
110	2y9h_N_G12_C13	A-B	AB05	95	0.11	AB05
111	2y9h_N_C13_G14	NAN	NANT	0	0.66	OP18
112	2y9h_N_G14_U15	BB2	BB07	11	0.62	BB07
113	2y9h_N_U15_G16	NAN	NANT	0	1.75	AA05
114	2y9h_N_G16_U17	AAA	AA00	27	0.34	AA00
115	2y9h_N_U17_G18	AAA	AA08	85	0.18	AA08
116	2y9h_N_G18_G19	AAA	AA00	76	0.11	AA00
117	2y9h_N_G19_G20	AAA	AA00	66	0.20	AA00
118	2y9h_N_G20_DG21	AAA	AA00	85	0.22	AA00
119	2y9h_N_DG21_A22	A-B	AB05	65	0.31	AB05
120	2y9h_P_U5_C6	NAN	NANT	0	0.69	OP12
121	2y9h_P_C6_C7	AAA	AA00	37	0.21	AA00
122	2y9h_P_C7_C8	AAA	AA00	94	0.13	AA00
123	2y9h_P_C8_C9	AAA	AA00	18	0.26	AA00
124	2y9h_P_C9_A10	AAA	AA00	12	0.34	AA00
125	2y9h_P_A10_C11	AAw	AA10	21	0.41	AA10
126	2y9h_P_C11_G12	NAN	NANT	0	0.79	AB04
127	2y9h_P_G12_C13	NAN	NANT	0	0.43	BB16
128	2y9h_P_C13_G14	NAN	NANT	0	1.01	OP18
129	2y9h_P_G14_U15	NAN	NANT	0	1.28	ZZ02
130	2y9h_P_U15_G16	NAN	NANT	0	1.11	OP17
131	2y9h_P_G16_U17	AAA	AA00	39	0.22	AA00
132	2y9h_P_U17_G18	AAA	AA00	69	0.12	AA00
133	2y9h_P_G18_G19	AAA	AA00	72	0.18	AA00
134	2y9h_P_G19_G20	AAA	AA00	41	0.30	AA00
135	2y9h_P_G20_DG21	AAA	AA00	79	0.33	AA00
136	2y9h_P_DG21_A22	NAN	NANT	0	0.48	AA10

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 136 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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