DNATCO v4.1: results

Complex structure of Sulfolobus solfataricus DPO4 and DNA duplex containing a hydrophobic thymine isostere 2,4-difluorotoluene nucleotide in the template strand

Results of the assignment of 52 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2v9w_C_DG1_DG2	NAN	NANT	0	0.82	OP24
02	2v9w_C_DG2_DG3	BBB	BB00	90	0.16	BB00
03	2v9w_C_DG3_DG4	BBB	BB00	70	0.39	BB00
04	2v9w_C_DG4_DG5	BBB	BB00	86	0.17	BB00
05	2v9w_C_DG5_DA6	BBB	BB00	88	0.20	BB00
06	2v9w_C_DA6_DA7	BBB	BB00	64	0.35	BB00
07	2v9w_C_DA7_DG8	BBB	BB00	63	0.32	BB00
08	2v9w_C_DG8_DG9	BBB	BB00	80	0.22	BB00
09	2v9w_C_DG9_DA10	BBB	BB00	79	0.24	BB00
10	2v9w_C_DA10_DC11	BBB	BB00	83	0.26	BB00
11	2v9w_C_DC11_DT12	NAN	NANT	0	0.42	BB02
12	2v9w_C_DT12_DG13	NAN	NANT	0	1.01	BB16
13	2v9w_D_DT1_DT.A2	NAN	NANT	0	0.90	BB03
14	2v9w_D_DT.A2_DC.A3	NAN	NANT	0	1.03	BB2S
15	2v9w_D_DC.A3_DA4	NAN	NANT	0	1.11	BB1S
16	2v9w_D_DA4_DG5	NAN	NANT	0	0.83	OP15
17	2v9w_D_DA7_DG8	BBB	BB00	22	0.37	BB00
18	2v9w_D_DG8_DT9	B12	BB04	73	0.20	BB04
19	2v9w_D_DT9_DC10	B12	BB04	55	0.33	BB04
20	2v9w_D_DC10_DC11	miB	BB10	69	0.40	BB10
21	2v9w_D_DC11_DT12	BBB	BB00	94	0.15	BB00
22	2v9w_D_DT12_DT13	B12	BB04	77	0.25	BB04
23	2v9w_D_DT13_DC14	BBB	BB00	78	0.35	BB00
24	2v9w_D_DC14_DC15	B12	BB04	77	0.17	BB04
25	2v9w_D_DC15_DC16	BBB	BB00	93	0.19	BB00
26	2v9w_D_DC16_DC17	B12	BB04	73	0.30	BB04
27	2v9w_D_DC17_DC18	BB2	BB08	56	0.38	BB08
28	2v9w_E_DG1_DG2	BBB	BB00	84	0.17	BB00
29	2v9w_E_DG2_DG3	B12	BB04	33	0.31	BB04
30	2v9w_E_DG3_DG4	B12	BB05	50	0.47	BB05
31	2v9w_E_DG4_DG5	BBB	BB00	36	0.43	BB00
32	2v9w_E_DG5_DA6	BBB	BB00	68	0.31	BB00
33	2v9w_E_DA6_DA7	B12	BB04	77	0.24	BB04
34	2v9w_E_DA7_DG8	BBB	BB00	66	0.28	BB00
35	2v9w_E_DG8_DG9	BBB	BB00	84	0.14	BB00
36	2v9w_E_DG9_DA10	B12	BB04	56	0.25	BB04
37	2v9w_E_DA10_DC11	BBB	BB00	74	0.33	BB00
38	2v9w_E_DC11_DT12	BBB	BB00	14	0.48	BB00
39	2v9w_E_DT12_DG13	NAN	NANT	0	0.85	BB13
40	2v9w_F_DC.A3_DA4	NAN	NANT	0	1.15	BB2S
41	2v9w_F_DA4_DG5	NAN	NANT	0	0.76	AA13
42	2v9w_F_DA7_DG8	BBw	BB02	62	0.27	BB02
43	2v9w_F_DG8_DT9	BBB	BB00	58	0.28	BB00
44	2v9w_F_DT9_DC10	B12	BB04	64	0.27	BB04
45	2v9w_F_DC10_DC11	BBw	BB02	55	0.29	BB02
46	2v9w_F_DC11_DT12	BBB	BB00	87	0.23	BB00
47	2v9w_F_DT12_DT13	BBB	BB00	59	0.34	BB00
48	2v9w_F_DT13_DC14	B12	BB04	74	0.26	BB04
49	2v9w_F_DC14_DC15	BBB	BB00	74	0.28	BB00
50	2v9w_F_DC15_DC16	BBB	BB00	39	0.56	BB00
51	2v9w_F_DC16_DC17	NAN	NANT	0	0.55	AB02
52	2v9w_F_DC17_DC18	BB2	BB07	68	0.40	BB07

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 52 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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