DNATCO v4.1: results

Solution Structure of RNA aptamer against AML1 Runt domain

Results of the assignment of 231 detected steps in 11 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2rrc-m10_A_G1_G2	AAA	AA00	50	0.48	AA00
002	2rrc-m11_A_G1_G2	AAA	AA00	64	0.40	AA00
003	2rrc-m1_A_G1_G2	AAA	AA00	47	0.42	AA00
004	2rrc-m2_A_G1_G2	AAA	AA00	40	0.44	AA00
005	2rrc-m3_A_G1_G2	AAA	AA00	81	0.26	AA00
006	2rrc-m4_A_G1_G2	AAA	AA00	60	0.32	AA00
007	2rrc-m5_A_G1_G2	AAA	AA00	42	0.41	AA00
008	2rrc-m6_A_G1_G2	AAA	AA00	76	0.29	AA00
009	2rrc-m7_A_G1_G2	AAA	AA00	75	0.32	AA00
010	2rrc-m8_A_G1_G2	AAA	AA00	28	0.43	AA00
011	2rrc-m9_A_G1_G2	AAA	AA00	68	0.32	AA00
012	2rrc-m10_A_G2_A3	AAA	AA00	31	0.46	AA00
013	2rrc-m11_A_G2_A3	AAA	AA00	56	0.35	AA00
014	2rrc-m1_A_G2_A3	AAu	AA12	34	0.30	AA12
015	2rrc-m2_A_G2_A3	AAu	AA12	26	0.32	AA12
016	2rrc-m3_A_G2_A3	AAA	AA00	34	0.38	AA00
017	2rrc-m4_A_G2_A3	AAA	AA00	68	0.25	AA00
018	2rrc-m5_A_G2_A3	AAA	AA00	71	0.22	AA00
019	2rrc-m6_A_G2_A3	AAA	AA00	64	0.26	AA00
020	2rrc-m7_A_G2_A3	AAA	AA00	57	0.31	AA00
021	2rrc-m8_A_G2_A3	AAA	AA00	13	0.47	AA00
022	2rrc-m9_A_G2_A3	AAA	AA00	65	0.26	AA00
023	2rrc-m10_A_A3_C4	AAA	AA00	77	0.21	AA00
024	2rrc-m11_A_A3_C4	AAA	AA00	87	0.22	AA00
025	2rrc-m1_A_A3_C4	AAA	AA00	74	0.22	AA00
026	2rrc-m2_A_A3_C4	AAA	AA00	58	0.23	AA00
027	2rrc-m3_A_A3_C4	AAA	AA00	87	0.21	AA00
028	2rrc-m4_A_A3_C4	AAA	AA00	88	0.19	AA00
029	2rrc-m5_A_A3_C4	AAA	AA00	83	0.22	AA00
030	2rrc-m6_A_A3_C4	AAA	AA00	90	0.19	AA00
031	2rrc-m7_A_A3_C4	AAA	AA00	88	0.20	AA00
032	2rrc-m8_A_A3_C4	AAA	AA00	65	0.24	AA00
033	2rrc-m9_A_A3_C4	AAA	AA00	86	0.20	AA00
034	2rrc-m10_A_C4_C5	AAA	AA00	33	0.41	AA00
035	2rrc-m11_A_C4_C5	AAA	AA08	43	0.46	AA08
036	2rrc-m1_A_C4_C5	AAA	AA00	40	0.40	AA00
037	2rrc-m2_A_C4_C5	AAA	AA00	26	0.42	AA00
038	2rrc-m3_A_C4_C5	AAA	AA08	48	0.44	AA08
039	2rrc-m4_A_C4_C5	AAA	AA08	55	0.38	AA08
040	2rrc-m5_A_C4_C5	AAA	AA00	23	0.50	AA00
041	2rrc-m6_A_C4_C5	AAA	AA00	25	0.45	AA00
042	2rrc-m7_A_C4_C5	AAA	AA00	24	0.45	AA00
043	2rrc-m8_A_C4_C5	AAA	AA00	23	0.50	AA00
044	2rrc-m9_A_C4_C5	AAA	AA00	23	0.46	AA00
045	2rrc-m10_A_C5_C6	AAA	AA00	44	0.53	AA00
046	2rrc-m11_A_C5_C6	AAw	AA01	19	0.62	AA01
047	2rrc-m1_A_C5_C6	AAA	AA00	48	0.52	AA00
048	2rrc-m2_A_C5_C6	AAA	AA00	41	0.49	AA00
049	2rrc-m3_A_C5_C6	AAw	AA01	23	0.66	AA01
050	2rrc-m4_A_C5_C6	AAA	AA00	29	0.62	AA00
051	2rrc-m5_A_C5_C6	AAw	AA01	23	0.61	AA01
052	2rrc-m6_A_C5_C6	AAA	AA00	22	0.61	AA00
053	2rrc-m7_A_C5_C6	AAA	AA00	31	0.58	AA00
054	2rrc-m8_A_C5_C6	AAw	AA01	24	0.62	AA01
055	2rrc-m9_A_C5_C6	AAA	AA00	20	0.60	AA00
056	2rrc-m10_A_C6_AP77	AAA	AA00	69	0.33	AA00
057	2rrc-m11_A_C6_AP77	AAw	AA01	47	0.40	AA01
058	2rrc-m1_A_C6_AP77	AAA	AA00	67	0.34	AA00
059	2rrc-m2_A_C6_AP77	AAA	AA00	72	0.29	AA00
060	2rrc-m3_A_C6_AP77	AAA	AA00	87	0.23	AA00
061	2rrc-m4_A_C6_AP77	AAw	AA01	66	0.47	AA01
062	2rrc-m5_A_C6_AP77	AAA	AA00	90	0.21	AA00
063	2rrc-m6_A_C6_AP77	AAw	AA01	70	0.43	AA01
064	2rrc-m7_A_C6_AP77	AAw	AA01	73	0.40	AA01
065	2rrc-m8_A_C6_AP77	AAA	AA00	88	0.22	AA00
066	2rrc-m9_A_C6_AP77	AAw	AA01	71	0.42	AA01
067	2rrc-m10_A_AP77_C8	AAA	AA00	71	0.24	AA00
068	2rrc-m11_A_AP77_C8	AAA	AA00	65	0.28	AA00
069	2rrc-m1_A_AP77_C8	AAA	AA00	64	0.26	AA00
070	2rrc-m2_A_AP77_C8	AAA	AA00	70	0.24	AA00
071	2rrc-m3_A_AP77_C8	AAA	AA00	66	0.26	AA00
072	2rrc-m4_A_AP77_C8	AAA	AA00	63	0.29	AA00
073	2rrc-m5_A_AP77_C8	AAA	AA00	64	0.27	AA00
074	2rrc-m6_A_AP77_C8	AAA	AA00	62	0.29	AA00
075	2rrc-m7_A_AP77_C8	AAA	AA00	61	0.31	AA00
076	2rrc-m8_A_AP77_C8	AAA	AA00	64	0.27	AA00
077	2rrc-m9_A_AP77_C8	AAA	AA00	63	0.29	AA00
078	2rrc-m10_A_C8_C9	AAA	AA00	27	0.43	AA00
079	2rrc-m11_A_C8_C9	AAA	AA00	21	0.45	AA00
080	2rrc-m1_A_C8_C9	AAA	AA00	18	0.45	AA00
081	2rrc-m2_A_C8_C9	AAA	AA00	30	0.39	AA00
082	2rrc-m3_A_C8_C9	AAA	AA04	60	0.45	AA04
083	2rrc-m4_A_C8_C9	AAA	AA00	30	0.42	AA00
084	2rrc-m5_A_C8_C9	AAA	AA00	15	0.47	AA00
085	2rrc-m6_A_C8_C9	AAA	AA00	13	0.46	AA00
086	2rrc-m7_A_C8_C9	AAA	AA00	16	0.48	AA00
087	2rrc-m8_A_C8_C9	AAA	AA00	21	0.45	AA00
088	2rrc-m9_A_C8_C9	AAA	AA00	15	0.47	AA00
089	2rrc-m10_A_C9_A10	NAN	NANT	0	0.87	OP04
090	2rrc-m11_A_C9_A10	NAN	NANT	0	1.77	OP29
091	2rrc-m1_A_C9_A10	OPN	OP09	23	0.37	OP09
092	2rrc-m2_A_C9_A10	OPN	OP09	22	0.34	OP09
093	2rrc-m3_A_C9_A10	NAN	NANT	0	0.41	OP09
094	2rrc-m4_A_C9_A10	NAN	NANT	0	1.93	IC03
095	2rrc-m5_A_C9_A10	NAN	NANT	0	0.42	OP09
096	2rrc-m6_A_C9_A10	OPN	OP09	17	0.35	OP09
097	2rrc-m7_A_C9_A10	NAN	NANT	0	0.50	OP09
098	2rrc-m8_A_C9_A10	NAN	NANT	0	0.41	OP09
099	2rrc-m9_A_C9_A10	NAN	NANT	0	0.39	OP09
100	2rrc-m10_A_A10_C11	NAN	NANT	0	0.47	OP20
101	2rrc-m11_A_A10_C11	NAN	NANT	0	0.47	OP20
102	2rrc-m1_A_A10_C11	NAN	NANT	0	0.54	OP20
103	2rrc-m2_A_A10_C11	NAN	NANT	0	0.51	OP20
104	2rrc-m3_A_A10_C11	NAN	NANT	0	0.59	OP20
105	2rrc-m4_A_A10_C11	NAN	NANT	0	1.31	IC04
106	2rrc-m5_A_A10_C11	NAN	NANT	0	0.61	OP20
107	2rrc-m6_A_A10_C11	NAN	NANT	0	0.50	OP20
108	2rrc-m7_A_A10_C11	NAN	NANT	0	2.02	OP22
109	2rrc-m8_A_A10_C11	NAN	NANT	0	0.55	OP20
110	2rrc-m9_A_A10_C11	NAN	NANT	0	0.58	OP20
111	2rrc-m10_A_C11_G12	NAN	NANT	0	0.49	ZZ1S
112	2rrc-m11_A_C11_G12	NAN	NANT	0	0.48	ZZ1S
113	2rrc-m1_A_C11_G12	NAN	NANT	0	0.47	ZZ1S
114	2rrc-m2_A_C11_G12	NAN	NANT	0	0.52	ZZ1S
115	2rrc-m3_A_C11_G12	NAN	NANT	0	0.47	ZZ1S
116	2rrc-m4_A_C11_G12	NAN	NANT	0	0.68	ZZ1S
117	2rrc-m5_A_C11_G12	NAN	NANT	0	0.47	ZZ1S
118	2rrc-m6_A_C11_G12	NAN	NANT	0	0.34	ZZ1S
119	2rrc-m7_A_C11_G12	NAN	NANT	0	0.29	ZZ1S
120	2rrc-m8_A_C11_G12	NAN	NANT	0	0.39	ZZ1S
121	2rrc-m9_A_C11_G12	NAN	NANT	0	0.46	ZZ1S
122	2rrc-m10_A_G12_G13	NAN	NANT	0	0.70	AAS1
123	2rrc-m11_A_G12_G13	NAN	NANT	0	0.79	AAS1
124	2rrc-m1_A_G12_G13	NAN	NANT	0	0.50	AA05
125	2rrc-m2_A_G12_G13	NAN	NANT	0	0.49	AA05
126	2rrc-m3_A_G12_G13	NAN	NANT	0	0.79	AAS1
127	2rrc-m4_A_G12_G13	NAN	NANT	0	0.46	AA05
128	2rrc-m5_A_G12_G13	NAN	NANT	0	0.74	AAS1
129	2rrc-m6_A_G12_G13	NAN	NANT	0	0.45	AA05
130	2rrc-m7_A_G12_G13	NAN	NANT	0	0.44	AA05
131	2rrc-m8_A_G12_G13	NAN	NANT	0	0.47	AA05
132	2rrc-m9_A_G12_G13	NAN	NANT	0	0.78	AAS1
133	2rrc-m10_A_G13_C14	NAN	NANT	0	0.59	AA01
134	2rrc-m11_A_G13_C14	NAN	NANT	0	0.56	AA01
135	2rrc-m1_A_G13_C14	NAN	NANT	0	0.55	AA01
136	2rrc-m2_A_G13_C14	NAN	NANT	0	0.66	AA04
137	2rrc-m3_A_G13_C14	NAN	NANT	0	0.55	AA01
138	2rrc-m4_A_G13_C14	AAA	AA04	44	0.51	AA04
139	2rrc-m5_A_G13_C14	NAN	NANT	0	0.53	AA01
140	2rrc-m6_A_G13_C14	NAN	NANT	0	0.54	AA01
141	2rrc-m7_A_G13_C14	NAN	NANT	0	0.60	AA01
142	2rrc-m8_A_G13_C14	NAN	NANT	0	0.54	AA01
143	2rrc-m9_A_G13_C14	NAN	NANT	0	0.56	AA01
144	2rrc-m10_A_C14_G15	NAN	NANT	0	0.74	IC06
145	2rrc-m11_A_C14_G15	NAN	NANT	0	0.75	IC06
146	2rrc-m1_A_C14_G15	NAN	NANT	0	0.72	IC06
147	2rrc-m2_A_C14_G15	NAN	NANT	0	0.93	IC06
148	2rrc-m3_A_C14_G15	NAN	NANT	0	0.72	IC06
149	2rrc-m4_A_C14_G15	NAN	NANT	0	0.91	IC06
150	2rrc-m5_A_C14_G15	NAN	NANT	0	0.69	IC06
151	2rrc-m6_A_C14_G15	NAN	NANT	0	0.85	IC06
152	2rrc-m7_A_C14_G15	NAN	NANT	0	0.71	IC06
153	2rrc-m8_A_C14_G15	NAN	NANT	0	0.70	IC06
154	2rrc-m9_A_C14_G15	NAN	NANT	0	0.85	IC06
155	2rrc-m10_A_G15_A16	NAN	NANT	0	1.36	AB02
156	2rrc-m11_A_G15_A16	NAN	NANT	0	1.35	AB02
157	2rrc-m1_A_G15_A16	NAN	NANT	0	1.34	AB02
158	2rrc-m2_A_G15_A16	NAN	NANT	0	1.53	AB02
159	2rrc-m3_A_G15_A16	NAN	NANT	0	1.32	AB02
160	2rrc-m4_A_G15_A16	NAN	NANT	0	1.26	AB02
161	2rrc-m5_A_G15_A16	NAN	NANT	0	1.31	AB02
162	2rrc-m6_A_G15_A16	NAN	NANT	0	1.55	AB02
163	2rrc-m7_A_G15_A16	NAN	NANT	0	1.51	AA12
164	2rrc-m8_A_G15_A16	NAN	NANT	0	1.33	AB02
165	2rrc-m9_A_G15_A16	NAN	NANT	0	1.55	AB02
166	2rrc-m10_A_A16_G17	AAA	AA04	28	0.50	AA04
167	2rrc-m11_A_A16_G17	AAA	AA04	31	0.46	AA04
168	2rrc-m1_A_A16_G17	AAA	AA04	30	0.49	AA04
169	2rrc-m2_A_A16_G17	NAN	NANT	0	0.67	AA08
170	2rrc-m3_A_A16_G17	AAA	AA04	29	0.48	AA04
171	2rrc-m4_A_A16_G17	AAA	AA04	33	0.49	AA04
172	2rrc-m5_A_A16_G17	AAA	AA04	28	0.51	AA04
173	2rrc-m6_A_A16_G17	NAN	NANT	0	0.75	AB02
174	2rrc-m7_A_A16_G17	NAN	NANT	0	0.64	AA08
175	2rrc-m8_A_A16_G17	AAA	AA04	29	0.49	AA04
176	2rrc-m9_A_A16_G17	NAN	NANT	0	0.74	AB02
177	2rrc-m10_A_G17_G18	AAA	AA00	72	0.31	AA00
178	2rrc-m11_A_G17_G18	AAA	AA00	84	0.25	AA00
179	2rrc-m1_A_G17_G18	AAA	AA00	74	0.30	AA00
180	2rrc-m2_A_G17_G18	AAA	AA00	79	0.26	AA00
181	2rrc-m3_A_G17_G18	AAA	AA00	82	0.27	AA00
182	2rrc-m4_A_G17_G18	AAA	AA00	78	0.28	AA00
183	2rrc-m5_A_G17_G18	AAA	AA00	71	0.30	AA00
184	2rrc-m6_A_G17_G18	AAA	AA00	84	0.26	AA00
185	2rrc-m7_A_G17_G18	AAA	AA00	85	0.21	AA00
186	2rrc-m8_A_G17_G18	AAA	AA00	73	0.30	AA00
187	2rrc-m9_A_G17_G18	AAA	AA00	80	0.29	AA00
188	2rrc-m10_A_G18_U19	AAA	AA08	54	0.27	AA08
189	2rrc-m11_A_G18_U19	AAA	AA08	55	0.29	AA08
190	2rrc-m1_A_G18_U19	AAA	AA08	59	0.28	AA08
191	2rrc-m2_A_G18_U19	AAA	AA08	60	0.27	AA08
192	2rrc-m3_A_G18_U19	AAA	AA08	59	0.26	AA08
193	2rrc-m4_A_G18_U19	AAA	AA08	62	0.23	AA08
194	2rrc-m5_A_G18_U19	AAA	AA08	58	0.28	AA08
195	2rrc-m6_A_G18_U19	AAA	AA08	52	0.28	AA08
196	2rrc-m7_A_G18_U19	AAA	AA08	61	0.25	AA08
197	2rrc-m8_A_G18_U19	AAA	AA08	61	0.27	AA08
198	2rrc-m9_A_G18_U19	AAA	AA08	57	0.27	AA08
199	2rrc-m10_A_U19_C20	AAA	AA00	48	0.35	AA00
200	2rrc-m11_A_U19_C20	AAA	AA04	60	0.37	AA04
201	2rrc-m1_A_U19_C20	AAA	AA00	49	0.42	AA00
202	2rrc-m2_A_U19_C20	AAA	AA00	38	0.44	AA00
203	2rrc-m3_A_U19_C20	AAA	AA00	61	0.35	AA00
204	2rrc-m4_A_U19_C20	AAA	AA00	30	0.43	AA00
205	2rrc-m5_A_U19_C20	AAA	AA00	34	0.42	AA00
206	2rrc-m6_A_U19_C20	AAA	AA00	44	0.35	AA00
207	2rrc-m7_A_U19_C20	AAA	AA00	53	0.35	AA00
208	2rrc-m8_A_U19_C20	AAA	AA00	41	0.43	AA00
209	2rrc-m9_A_U19_C20	AAA	AA00	45	0.37	AA00
210	2rrc-m10_A_C20_C21	AAA	AA00	26	0.48	AA00
211	2rrc-m11_A_C20_C21	AAA	AA00	14	0.52	AA00
212	2rrc-m1_A_C20_C21	AAA	AA00	17	0.53	AA00
213	2rrc-m2_A_C20_C21	AAA	AA00	10	0.55	AA00
214	2rrc-m3_A_C20_C21	AAA	AA00	49	0.40	AA00
215	2rrc-m4_A_C20_C21	AAA	AA00	55	0.36	AA00
216	2rrc-m5_A_C20_C21	AAA	AA00	45	0.41	AA00
217	2rrc-m6_A_C20_C21	AAA	AA00	30	0.46	AA00
218	2rrc-m7_A_C20_C21	AAA	AA00	53	0.39	AA00
219	2rrc-m8_A_C20_C21	AAA	AA00	21	0.49	AA00
220	2rrc-m9_A_C20_C21	AAA	AA00	59	0.37	AA00
221	2rrc-m10_A_C21_A22	AAw	AA01	63	0.29	AA01
222	2rrc-m11_A_C21_A22	AAw	AA01	67	0.29	AA01
223	2rrc-m1_A_C21_A22	AAw	AA01	69	0.29	AA01
224	2rrc-m2_A_C21_A22	AAw	AA01	71	0.28	AA01
225	2rrc-m3_A_C21_A22	NAN	NANT	0	1.19	AA01
226	2rrc-m4_A_C21_A22	NAN	NANT	0	1.38	AA12
227	2rrc-m5_A_C21_A22	AAw	AA01	70	0.28	AA01
228	2rrc-m6_A_C21_A22	AAw	AA01	69	0.28	AA01
229	2rrc-m7_A_C21_A22	AAA	AA04	77	0.32	AA04
230	2rrc-m8_A_C21_A22	NAN	NANT	0	1.38	AA12
231	2rrc-m9_A_C21_A22	AAA	AA04	71	0.31	AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 231 detected steps in 11 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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