DNATCO v4.1: results

The Three Dimensional Structure of the Moorella thermoacetica Selenocysteine Insertion Sequence RNA Hairpin and its Interaction with the Elongation factor SelB

Results of the assignment of 180 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2rlu-m10_A_G1_G2	AAA	AA00	99	0.15	AA00
002	2rlu-m1_A_G1_G2	AAA	AA00	99	0.15	AA00
003	2rlu-m2_A_G1_G2	AAA	AA00	98	0.15	AA00
004	2rlu-m3_A_G1_G2	AAA	AA00	98	0.14	AA00
005	2rlu-m4_A_G1_G2	AAA	AA00	98	0.14	AA00
006	2rlu-m5_A_G1_G2	AAA	AA00	99	0.14	AA00
007	2rlu-m6_A_G1_G2	AAA	AA00	99	0.14	AA00
008	2rlu-m7_A_G1_G2	AAA	AA00	98	0.14	AA00
009	2rlu-m8_A_G1_G2	AAA	AA00	97	0.14	AA00
010	2rlu-m9_A_G1_G2	AAA	AA00	98	0.14	AA00
011	2rlu-m10_A_G2_U3	AAA	AA00	99	0.14	AA00
012	2rlu-m1_A_G2_U3	AAA	AA00	99	0.13	AA00
013	2rlu-m2_A_G2_U3	AAA	AA00	99	0.13	AA00
014	2rlu-m3_A_G2_U3	AAA	AA00	99	0.13	AA00
015	2rlu-m4_A_G2_U3	AAA	AA00	99	0.13	AA00
016	2rlu-m5_A_G2_U3	AAA	AA00	99	0.13	AA00
017	2rlu-m6_A_G2_U3	AAA	AA00	99	0.12	AA00
018	2rlu-m7_A_G2_U3	AAA	AA00	99	0.13	AA00
019	2rlu-m8_A_G2_U3	AAA	AA00	99	0.12	AA00
020	2rlu-m9_A_G2_U3	AAA	AA00	99	0.12	AA00
021	2rlu-m10_A_U3_U4	AAA	AA00	98	0.17	AA00
022	2rlu-m1_A_U3_U4	AAA	AA00	98	0.15	AA00
023	2rlu-m2_A_U3_U4	AAA	AA00	99	0.15	AA00
024	2rlu-m3_A_U3_U4	AAA	AA00	98	0.15	AA00
025	2rlu-m4_A_U3_U4	AAA	AA00	98	0.14	AA00
026	2rlu-m5_A_U3_U4	AAA	AA00	98	0.15	AA00
027	2rlu-m6_A_U3_U4	AAA	AA00	98	0.15	AA00
028	2rlu-m7_A_U3_U4	AAA	AA00	99	0.15	AA00
029	2rlu-m8_A_U3_U4	AAA	AA00	98	0.15	AA00
030	2rlu-m9_A_U3_U4	AAA	AA00	98	0.15	AA00
031	2rlu-m10_A_U4_G5	AAA	AA00	99	0.18	AA00
032	2rlu-m1_A_U4_G5	AAA	AA00	99	0.16	AA00
033	2rlu-m2_A_U4_G5	AAA	AA00	98	0.17	AA00
034	2rlu-m3_A_U4_G5	AAA	AA00	99	0.17	AA00
035	2rlu-m4_A_U4_G5	AAA	AA00	99	0.16	AA00
036	2rlu-m5_A_U4_G5	AAA	AA00	98	0.17	AA00
037	2rlu-m6_A_U4_G5	AAA	AA00	98	0.17	AA00
038	2rlu-m7_A_U4_G5	AAA	AA00	98	0.17	AA00
039	2rlu-m8_A_U4_G5	AAA	AA00	99	0.16	AA00
040	2rlu-m9_A_U4_G5	AAA	AA00	98	0.16	AA00
041	2rlu-m10_A_G5_C6	AAA	AA00	97	0.21	AA00
042	2rlu-m1_A_G5_C6	AAA	AA00	97	0.19	AA00
043	2rlu-m2_A_G5_C6	AAA	AA00	97	0.20	AA00
044	2rlu-m3_A_G5_C6	AAA	AA00	97	0.20	AA00
045	2rlu-m4_A_G5_C6	AAA	AA00	98	0.18	AA00
046	2rlu-m5_A_G5_C6	AAA	AA00	96	0.21	AA00
047	2rlu-m6_A_G5_C6	AAA	AA00	97	0.19	AA00
048	2rlu-m7_A_G5_C6	AAA	AA00	97	0.20	AA00
049	2rlu-m8_A_G5_C6	AAA	AA00	96	0.19	AA00
050	2rlu-m9_A_G5_C6	AAA	AA00	96	0.19	AA00
051	2rlu-m10_A_C6_G7	AAA	AA00	94	0.27	AA00
052	2rlu-m1_A_C6_G7	AAA	AA00	96	0.24	AA00
053	2rlu-m2_A_C6_G7	AAA	AA00	92	0.27	AA00
054	2rlu-m3_A_C6_G7	AAA	AA00	92	0.27	AA00
055	2rlu-m4_A_C6_G7	AAA	AA00	93	0.26	AA00
056	2rlu-m5_A_C6_G7	AAA	AA00	93	0.27	AA00
057	2rlu-m6_A_C6_G7	AAA	AA00	95	0.25	AA00
058	2rlu-m7_A_C6_G7	AAA	AA00	94	0.26	AA00
059	2rlu-m8_A_C6_G7	AAA	AA00	94	0.26	AA00
060	2rlu-m9_A_C6_G7	AAA	AA00	93	0.26	AA00
061	2rlu-m10_A_G7_G8	AAA	AA08	40	0.37	AA08
062	2rlu-m1_A_G7_G8	AAA	AA08	35	0.40	AA08
063	2rlu-m2_A_G7_G8	AAA	AA08	35	0.41	AA08
064	2rlu-m3_A_G7_G8	AAA	AA08	27	0.47	AA08
065	2rlu-m4_A_G7_G8	AAA	AA08	36	0.42	AA08
066	2rlu-m5_A_G7_G8	AAA	AA08	37	0.39	AA08
067	2rlu-m6_A_G7_G8	AAA	AA08	35	0.39	AA08
068	2rlu-m7_A_G7_G8	AAA	AA08	38	0.39	AA08
069	2rlu-m8_A_G7_G8	AAA	AA08	36	0.42	AA08
070	2rlu-m9_A_G7_G8	AAA	AA08	31	0.44	AA08
071	2rlu-m10_A_G8_G9	SYN	AB2S	80	0.26	AB2S
072	2rlu-m1_A_G8_G9	SYN	AB2S	26	0.51	AB2S
073	2rlu-m2_A_G8_G9	NAN	NANT	0	0.57	AA01
074	2rlu-m3_A_G8_G9	NAN	NANT	0	0.55	AA01
075	2rlu-m4_A_G8_G9	SYN	AB2S	80	0.26	AB2S
076	2rlu-m5_A_G8_G9	SYN	AB2S	79	0.27	AB2S
077	2rlu-m6_A_G8_G9	SYN	AB2S	44	0.45	AB2S
078	2rlu-m7_A_G8_G9	SYN	AB2S	78	0.29	AB2S
079	2rlu-m8_A_G8_G9	SYN	AB2S	60	0.39	AB2S
080	2rlu-m9_A_G8_G9	SYN	AB2S	57	0.42	AB2S
081	2rlu-m10_A_G9_U10	NAN	NANT	0	1.07	OP09
082	2rlu-m1_A_G9_U10	NAN	NANT	0	0.91	OP09
083	2rlu-m2_A_G9_U10	NAN	NANT	0	2.13	OP17
084	2rlu-m3_A_G9_U10	NAN	NANT	0	1.03	OP09
085	2rlu-m4_A_G9_U10	NAN	NANT	0	1.09	OP09
086	2rlu-m5_A_G9_U10	NAN	NANT	0	1.09	OP09
087	2rlu-m6_A_G9_U10	NAN	NANT	0	1.05	OP09
088	2rlu-m7_A_G9_U10	NAN	NANT	0	1.08	OP09
089	2rlu-m8_A_G9_U10	NAN	NANT	0	1.04	OP09
090	2rlu-m9_A_G9_U10	NAN	NANT	0	1.06	OP09
091	2rlu-m10_A_U10_C11	NAN	NANT	0	1.05	OP12
092	2rlu-m1_A_U10_C11	NAN	NANT	0	1.16	OP12
093	2rlu-m2_A_U10_C11	NAN	NANT	0	1.12	OP12
094	2rlu-m3_A_U10_C11	NAN	NANT	0	1.13	OP12
095	2rlu-m4_A_U10_C11	NAN	NANT	0	1.06	OP12
096	2rlu-m5_A_U10_C11	NAN	NANT	0	1.04	OP12
097	2rlu-m6_A_U10_C11	NAN	NANT	0	1.18	OP12
098	2rlu-m7_A_U10_C11	NAN	NANT	0	1.07	OP12
099	2rlu-m8_A_U10_C11	NAN	NANT	0	1.08	OP12
100	2rlu-m9_A_U10_C11	NAN	NANT	0	1.15	OP12
101	2rlu-m10_A_C11_U12	NAN	NANT	0	0.59	OP09
102	2rlu-m1_A_C11_U12	NAN	NANT	0	0.62	OP17
103	2rlu-m2_A_C11_U12	NAN	NANT	0	0.62	OP09
104	2rlu-m3_A_C11_U12	NAN	NANT	0	0.46	OP09
105	2rlu-m4_A_C11_U12	NAN	NANT	0	0.56	OP09
106	2rlu-m5_A_C11_U12	NAN	NANT	0	0.50	OP09
107	2rlu-m6_A_C11_U12	NAN	NANT	0	0.55	OP17
108	2rlu-m7_A_C11_U12	NAN	NANT	0	0.57	OP09
109	2rlu-m8_A_C11_U12	NAN	NANT	0	0.52	OP09
110	2rlu-m9_A_C11_U12	NAN	NANT	0	1.12	AA12
111	2rlu-m10_A_U12_C13	OPN	OP11	59	0.58	OP11
112	2rlu-m1_A_U12_C13	OPN	OP06	43	0.49	OP06
113	2rlu-m2_A_U12_C13	OPN	OP11	55	0.73	OP11
114	2rlu-m3_A_U12_C13	OPN	OP11	57	0.60	OP11
115	2rlu-m4_A_U12_C13	OPN	OP11	56	0.56	OP11
116	2rlu-m5_A_U12_C13	OPN	OP11	58	0.52	OP11
117	2rlu-m6_A_U12_C13	OPN	OP06	54	0.41	OP06
118	2rlu-m7_A_U12_C13	OPN	OP11	58	0.57	OP11
119	2rlu-m8_A_U12_C13	OPN	OP11	57	0.60	OP11
120	2rlu-m9_A_U12_C13	NAN	NANT	0	1.07	IC04
121	2rlu-m10_A_C13_G14	AAA	AA00	95	0.19	AA00
122	2rlu-m1_A_C13_G14	AAA	AA00	96	0.18	AA00
123	2rlu-m2_A_C13_G14	AAA	AA00	94	0.19	AA00
124	2rlu-m3_A_C13_G14	AAA	AA00	94	0.20	AA00
125	2rlu-m4_A_C13_G14	AAA	AA00	95	0.18	AA00
126	2rlu-m5_A_C13_G14	AAA	AA00	92	0.20	AA00
127	2rlu-m6_A_C13_G14	AAA	AA00	96	0.19	AA00
128	2rlu-m7_A_C13_G14	AAA	AA00	94	0.19	AA00
129	2rlu-m8_A_C13_G14	AAA	AA00	94	0.20	AA00
130	2rlu-m9_A_C13_G14	AAA	AA00	95	0.18	AA00
131	2rlu-m10_A_G14_C15	AAA	AA00	98	0.20	AA00
132	2rlu-m1_A_G14_C15	AAA	AA00	98	0.20	AA00
133	2rlu-m2_A_G14_C15	AAA	AA00	98	0.18	AA00
134	2rlu-m3_A_G14_C15	AAA	AA00	99	0.20	AA00
135	2rlu-m4_A_G14_C15	AAA	AA00	99	0.19	AA00
136	2rlu-m5_A_G14_C15	AAA	AA00	99	0.19	AA00
137	2rlu-m6_A_G14_C15	AAA	AA00	98	0.21	AA00
138	2rlu-m7_A_G14_C15	AAA	AA00	98	0.20	AA00
139	2rlu-m8_A_G14_C15	AAA	AA00	98	0.19	AA00
140	2rlu-m9_A_G14_C15	AAA	AA00	99	0.19	AA00
141	2rlu-m10_A_C15_A16	AAA	AA00	98	0.20	AA00
142	2rlu-m1_A_C15_A16	AAA	AA00	98	0.20	AA00
143	2rlu-m2_A_C15_A16	AAA	AA00	98	0.18	AA00
144	2rlu-m3_A_C15_A16	AAA	AA00	98	0.20	AA00
145	2rlu-m4_A_C15_A16	AAA	AA00	98	0.20	AA00
146	2rlu-m5_A_C15_A16	AAA	AA00	98	0.20	AA00
147	2rlu-m6_A_C15_A16	AAA	AA00	98	0.20	AA00
148	2rlu-m7_A_C15_A16	AAA	AA00	98	0.20	AA00
149	2rlu-m8_A_C15_A16	AAA	AA00	98	0.20	AA00
150	2rlu-m9_A_C15_A16	AAA	AA00	98	0.20	AA00
151	2rlu-m10_A_A16_A17	AAA	AA00	99	0.16	AA00
152	2rlu-m1_A_A16_A17	AAA	AA00	99	0.17	AA00
153	2rlu-m2_A_A16_A17	AAA	AA00	99	0.15	AA00
154	2rlu-m3_A_A16_A17	AAA	AA00	99	0.17	AA00
155	2rlu-m4_A_A16_A17	AAA	AA00	99	0.18	AA00
156	2rlu-m5_A_A16_A17	AAA	AA00	99	0.17	AA00
157	2rlu-m6_A_A16_A17	AAA	AA00	99	0.17	AA00
158	2rlu-m7_A_A16_A17	AAA	AA00	99	0.17	AA00
159	2rlu-m8_A_A16_A17	AAA	AA00	99	0.16	AA00
160	2rlu-m9_A_A16_A17	AAA	AA00	99	0.17	AA00
161	2rlu-m10_A_A17_C18	AAA	AA00	99	0.19	AA00
162	2rlu-m1_A_A17_C18	AAA	AA00	99	0.18	AA00
163	2rlu-m2_A_A17_C18	AAA	AA00	99	0.17	AA00
164	2rlu-m3_A_A17_C18	AAA	AA00	99	0.20	AA00
165	2rlu-m4_A_A17_C18	AAA	AA00	98	0.21	AA00
166	2rlu-m5_A_A17_C18	AAA	AA00	99	0.20	AA00
167	2rlu-m6_A_A17_C18	AAA	AA00	99	0.18	AA00
168	2rlu-m7_A_A17_C18	AAA	AA00	99	0.18	AA00
169	2rlu-m8_A_A17_C18	AAA	AA00	99	0.17	AA00
170	2rlu-m9_A_A17_C18	AAA	AA00	98	0.19	AA00
171	2rlu-m10_A_C18_C19	AAA	AA00	93	0.25	AA00
172	2rlu-m1_A_C18_C19	AAA	AA00	92	0.26	AA00
173	2rlu-m2_A_C18_C19	AAA	AA00	92	0.24	AA00
174	2rlu-m3_A_C18_C19	AAA	AA00	94	0.26	AA00
175	2rlu-m4_A_C18_C19	AAA	AA00	93	0.27	AA00
176	2rlu-m5_A_C18_C19	AAA	AA00	95	0.26	AA00
177	2rlu-m6_A_C18_C19	AAA	AA00	93	0.25	AA00
178	2rlu-m7_A_C18_C19	AAA	AA00	93	0.25	AA00
179	2rlu-m8_A_C18_C19	AAA	AA00	92	0.24	AA00
180	2rlu-m9_A_C18_C19	AAA	AA00	94	0.25	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 180 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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