DNATCO v4.1: results

Hammerhead Ribozyme G12A mutant after cleavage

Results of the assignment of 134 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2quw_A_GTP1_G2	AAA	AA08	63	0.25	AA08
002	2quw_A_G2_G3	AAw	AA01	95	0.17	AA01
003	2quw_A_G3_A4	AAA	AA00	72	0.20	AA00
004	2quw_A_A4_G5	AAA	AA00	80	0.11	AA00
005	2quw_A_G5_C6	AAA	AA08	91	0.17	AA08
006	2quw_A_C6_C7	AAA	AA08	94	0.16	AA08
007	2quw_A_C7_C8	AAA	AA00	68	0.24	AA00
008	2quw_A_C8_U9	AAA	AA00	78	0.20	AA00
009	2quw_A_U9_G10	AAA	AA08	82	0.19	AA08
010	2quw_A_G10_U11	AAA	AA00	91	0.21	AA00
011	2quw_A_U11_CCC12	A-B	AB05	46	0.33	AB05
012	2quw_B_A13_C14	AAA	AA00	76	0.21	AA00
013	2quw_B_C14_C15	AAA	AA00	68	0.14	AA00
014	2quw_B_C15_G16	AAA	AA08	76	0.18	AA08
015	2quw_B_G16_G17	AAA	AA00	81	0.14	AA00
016	2quw_B_G17_A18	AAA	AA00	88	0.23	AA00
017	2quw_B_A18_U19	AAA	AA00	34	0.29	AA00
018	2quw_B_U19_G20	NAN	NANT	0	1.26	AB02
019	2quw_B_G20_U21	NAN	NANT	0	0.93	ZZ02
020	2quw_B_U21_G22	NAN	NANT	0	0.65	ZZ1S
021	2quw_B_G22_C23	NAN	NANT	0	0.82	AB04
022	2quw_B_C23_U24	NAN	NANT	0	0.65	BB20
023	2quw_B_U24_U25	NAN	NANT	0	1.10	OP23
024	2quw_B_U25_U26	NAN	NANT	0	0.72	OP07
025	2quw_B_U26_C27	AAA	AA00	96	0.10	AA00
026	2quw_B_C27_C28	AAA	AA08	77	0.20	AA08
027	2quw_B_C28_G29	AAA	AA00	90	0.11	AA00
028	2quw_B_G29_G30	AAA	AA04	93	0.14	AA04
029	2quw_B_G30_U31	AAA	AA08	75	0.16	AA08
030	2quw_B_U31_C32	A-B	AB05	62	0.32	AB05
031	2quw_B_C32_U33	NAN	NANT	0	0.55	BA17
032	2quw_B_U33_G34	NAN	NANT	0	1.59	OP05
033	2quw_B_G34_A35	AAA	AA00	74	0.25	AA00
034	2quw_B_A35_U36	NAN	NANT	0	0.85	IC03
035	2quw_B_U36_G37	ZZZ	ZZ02	25	0.46	ZZ02
036	2quw_B_G37_A38	NAN	NANT	0	0.51	OP02
037	2quw_B_A38_G39	AAA	AA08	79	0.23	AA08
038	2quw_B_G39_U40	AAA	AA08	76	0.29	AA08
039	2quw_B_U40_C41	AAA	AA08	84	0.14	AA08
040	2quw_B_C41_C42	AAA	AA00	80	0.22	AA00
041	2quw_B_C42_G43	AAA	AA00	84	0.21	AA00
042	2quw_B_G43_U44	A-B	AB05	26	0.68	AB05
043	2quw_B_U44_G45	NAN	NANT	0	1.09	OP21
044	2quw_B_G45_A46	NAN	NANT	0	1.32	BB08
045	2quw_B_A46_G47	NAN	NANT	0	0.94	OP19
046	2quw_B_G47_G48	AAA	AA00	48	0.23	AA00
047	2quw_B_G48_A49	AAA	AA08	65	0.27	AA08
048	2quw_B_A49_C50	AAA	AA00	66	0.43	AA00
049	2quw_B_C50_A51	A-B	AB05	48	0.50	AB05
050	2quw_B_A51_A52	OPN	OP10	43	0.31	OP10
051	2quw_B_A52_A53	AAA	AA00	62	0.33	AA00
052	2quw_B_A53_A54	AAA	AA00	57	0.25	AA00
053	2quw_B_A54_C55	AAA	AA00	79	0.20	AA00
054	2quw_B_C55_A56	AAA	AA00	92	0.12	AA00
055	2quw_B_A56_G57	AAA	AA08	85	0.29	AA08
056	2quw_B_G57_G58	AAA	AA00	77	0.14	AA00
057	2quw_B_G58_G59	AAA	AA00	58	0.23	AA00
058	2quw_B_G59_C60	AAA	AA08	81	0.16	AA08
059	2quw_B_C60_U61	AAA	AA00	59	0.27	AA00
060	2quw_B_U61_C62	AAw	AA01	50	0.28	AA01
061	2quw_B_C62_C63	AAA	AA08	72	0.25	AA08
062	2quw_B_C63_C64	AAA	AA00	88	0.16	AA00
063	2quw_B_C64_G65	AAA	AA00	75	0.25	AA00
064	2quw_B_G65_A66	AAA	AA08	87	0.15	AA08
065	2quw_B_A66_A67	AAA	AA08	80	0.20	AA08
066	2quw_B_A67_U68	AAA	AA00	83	0.13	AA00
067	2quw_B_U68_U69	AAA	AA00	75	0.18	AA00
068	2quw_C_GTP1_G2	AAA	AA00	42	0.30	AA00
069	2quw_C_G2_G3	AAw	AA06	65	0.24	AA06
070	2quw_C_G3_A4	AAA	AA08	70	0.20	AA08
071	2quw_C_A4_G5	AAA	AA00	75	0.15	AA00
072	2quw_C_G5_C6	AAA	AA00	65	0.16	AA00
073	2quw_C_C6_C7	AAA	AA00	43	0.34	AA00
074	2quw_C_C7_C8	AAA	AA00	68	0.24	AA00
075	2quw_C_C8_U9	AAA	AA00	88	0.16	AA00
076	2quw_C_U9_G10	AAA	AA00	93	0.15	AA00
077	2quw_C_G10_U11	AAA	AA00	87	0.14	AA00
078	2quw_C_U11_CCC12	A-B	AB05	76	0.34	AB05
079	2quw_D_A13_C14	AAA	AA08	91	0.17	AA08
080	2quw_D_C14_C15	AAA	AA00	90	0.15	AA00
081	2quw_D_C15_G16	AAA	AA00	80	0.16	AA00
082	2quw_D_G16_G17	AAA	AA00	54	0.21	AA00
083	2quw_D_G17_A18	AAA	AA00	88	0.21	AA00
084	2quw_D_A18_U19	AAA	AA00	79	0.22	AA00
085	2quw_D_U19_G20	NAN	NANT	0	0.33	IC04
086	2quw_D_G20_U21	NAN	NANT	0	1.45	OP22
087	2quw_D_U21_G22	NAN	NANT	0	0.44	ZZ1S
088	2quw_D_G22_C23	NAN	NANT	0	0.97	OP05
089	2quw_D_C23_U24	NAN	NANT	0	0.50	OPS1
090	2quw_D_U24_U25	NAN	NANT	0	0.79	OP23
091	2quw_D_U25_U26	OPN	OP16	56	0.44	OP16
092	2quw_D_U26_C27	AAA	AA00	89	0.09	AA00
093	2quw_D_C27_C28	AAA	AA04	68	0.35	AA04
094	2quw_D_C28_G29	AAA	AA00	82	0.12	AA00
095	2quw_D_G29_G30	AAA	AA00	44	0.25	AA00
096	2quw_D_G30_U31	AAA	AA08	80	0.16	AA08
097	2quw_D_U31_C32	A-B	AB05	66	0.31	AB05
098	2quw_D_C32_U33	NAN	NANT	0	0.61	OP24
099	2quw_D_U33_G34	NAN	NANT	0	0.57	OP03
100	2quw_D_G34_A35	AAA	AA00	51	0.28	AA00
101	2quw_D_A35_U36	NAN	NANT	0	0.83	IC03
102	2quw_D_U36_G37	NAN	NANT	0	0.59	ZZ02
103	2quw_D_G37_A38	NAN	NANT	0	0.49	OP02
104	2quw_D_A38_G39	AAA	AA00	85	0.18	AA00
105	2quw_D_G39_U40	AAA	AA00	54	0.29	AA00
106	2quw_D_U40_C41	AAA	AA00	59	0.17	AA00
107	2quw_D_C41_C42	AAA	AA00	59	0.26	AA00
108	2quw_D_C42_G43	NAN	NANT	0	0.77	AA11
109	2quw_D_G43_U44	NAN	NANT	0	1.02	OP17
110	2quw_D_U44_G45	NAN	NANT	0	2.42	OP18
111	2quw_D_G45_A46	NAN	NANT	0	1.21	ZZ02
112	2quw_D_A46_G47	NAN	NANT	0	0.85	OP19
113	2quw_D_G47_G48	AAA	AA00	68	0.21	AA00
114	2quw_D_G48_A49	AAA	AA00	58	0.21	AA00
115	2quw_D_A49_C50	AAA	AA08	76	0.25	AA08
116	2quw_D_C50_A51	AAA	AA08	42	0.61	AA08
117	2quw_D_A51_A52	AAu	AA12	64	0.55	AA12
118	2quw_D_A52_A53	AAA	AA08	58	0.30	AA08
119	2quw_D_A53_A54	AAA	AA08	88	0.29	AA08
120	2quw_D_A54_C55	AAA	AA08	80	0.20	AA08
121	2quw_D_C55_A56	AAA	AA04	87	0.18	AA04
122	2quw_D_A56_G57	AAA	AA00	67	0.14	AA00
123	2quw_D_G57_G58	AAA	AA00	73	0.23	AA00
124	2quw_D_G58_G59	AAA	AA00	70	0.22	AA00
125	2quw_D_G59_C60	AAA	AA00	75	0.18	AA00
126	2quw_D_C60_U61	AAA	AA08	92	0.10	AA08
127	2quw_D_U61_C62	AAA	AA00	77	0.16	AA00
128	2quw_D_C62_C63	AAA	AA00	80	0.21	AA00
129	2quw_D_C63_C64	AAA	AA00	90	0.16	AA00
130	2quw_D_C64_G65	AAA	AA00	76	0.23	AA00
131	2quw_D_G65_A66	AAA	AA00	69	0.18	AA00
132	2quw_D_A66_A67	AAA	AA00	90	0.12	AA00
133	2quw_D_A67_U68	AAA	AA00	76	0.23	AA00
134	2quw_D_U68_U69	AAA	AA08	72	0.21	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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N

Results of the assignment of 134 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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