DNATCO v4.1: results

Variant 4 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle

Results of the assignment of 48 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2pxe_B_G130_G131	AAA	AA00	89	0.10	AA00
02	2pxe_B_G131_G132	AAA	AA00	58	0.25	AA00
03	2pxe_B_G132_U133	AAA	AA00	73	0.31	AA00
04	2pxe_B_U133_C134	AAA	AA00	91	0.17	AA00
05	2pxe_B_C134_U135	AAA	AA00	96	0.12	AA00
06	2pxe_B_U135_G136	AAA	AA00	79	0.13	AA00
07	2pxe_B_G136_U137	AAA	AA08	83	0.24	AA08
08	2pxe_B_U137_U138	AAA	AA00	94	0.17	AA00
09	2pxe_B_U138_U139	AAA	AA00	65	0.25	AA00
10	2pxe_B_U139_A140	NAN	NANT	0	1.37	OP17
11	2pxe_B_A140_C141	AAA	AA00	11	0.37	AA00
12	2pxe_B_C141_C142	AAA	AA00	17	0.55	AA00
13	2pxe_B_C142_A143	NAN	NANT	0	0.38	OP06
14	2pxe_B_A143_G144	NAN	NANT	0	0.62	OP30
15	2pxe_B_G144_G145	AAA	AA00	30	0.30	AA00
16	2pxe_B_G145_U146	AAA	AA00	83	0.21	AA00
17	2pxe_B_U146_C147	NAN	NANT	0	0.69	AA10
18	2pxe_B_C147_A148	NAN	NANT	0	0.57	AA07
19	2pxe_B_A148_G149	AAA	AA08	32	0.51	AA08
20	2pxe_B_G149_G150	AAA	AA00	54	0.36	AA00
21	2pxe_B_G150_U151	AAA	AA00	78	0.36	AA00
22	2pxe_B_U151_C152	AAA	AA00	89	0.17	AA00
23	2pxe_B_C152_C153	AAA	AA00	75	0.25	AA00
24	2pxe_B_C153_G154	AAA	AA00	82	0.24	AA00
25	2pxe_B_G154_A155	OPN	OP03	92	0.11	OP03
26	2pxe_B_A155_A156	AAA	AA08	65	0.23	AA08
27	2pxe_B_A156_A157	AAA	AA00	13	0.38	AA00
28	2pxe_B_A157_G158	AAw	AA05	86	0.25	AA05
29	2pxe_B_G158_G159	NAN	NANT	0	0.79	AA11
30	2pxe_B_G159_A160	AAA	AA00	48	0.28	AA00
31	2pxe_B_A160_A161	AAA	AA00	86	0.19	AA00
32	2pxe_B_A161_G162	AAA	AA00	43	0.44	AA00
33	2pxe_B_G162_C163	AAu	AA12	90	0.38	AA12
34	2pxe_B_C163_A164	AAA	AA00	82	0.18	AA00
35	2pxe_B_A164_G165	AAA	AA00	64	0.39	AA00
36	2pxe_B_G165_C166	AAA	AA00	70	0.28	AA00
37	2pxe_B_C166_C167	AAA	AA00	77	0.23	AA00
38	2pxe_B_C167_A168	AAA	AA00	77	0.27	AA00
39	2pxe_B_A168_A169	AAA	AA00	46	0.39	AA00
40	2pxe_B_A169_G170	AAA	AA00	87	0.12	AA00
41	2pxe_B_G170_G171	AAA	AA00	69	0.28	AA00
42	2pxe_B_G171_C172	AAA	AA00	63	0.26	AA00
43	2pxe_B_C172_A173	AAw	AA01	89	0.14	AA01
44	2pxe_B_A173_G174	AAA	AA08	92	0.13	AA08
45	2pxe_B_G174_G175	AAA	AA00	71	0.25	AA00
46	2pxe_B_G175_U176	AAA	AA00	73	0.26	AA00
47	2pxe_B_U176_C177	AAA	AA00	85	0.15	AA00
48	2pxe_B_C177_C178	AAA	AA00	40	0.24	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 48 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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