DNATCO v4.1: results

Variant 1 of Ribonucleoprotein Core of the E. Coli Signal Recognition Particle

Results of the assignment of 48 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2pxd_B_G130_G131	AAA	AA00	72	0.16	AA00
02	2pxd_B_G131_G132	AAA	AA00	69	0.22	AA00
03	2pxd_B_G132_G133	AAA	AA00	91	0.23	AA00
04	2pxd_B_G133_C134	AAA	AA00	81	0.21	AA00
05	2pxd_B_C134_U135	AAA	AA00	93	0.11	AA00
06	2pxd_B_U135_G136	AAA	AA08	84	0.20	AA08
07	2pxd_B_G136_U137	AAA	AA00	80	0.23	AA00
08	2pxd_B_U137_U138	AAA	AA00	94	0.14	AA00
09	2pxd_B_U138_U139	AAA	AA00	56	0.24	AA00
10	2pxd_B_U139_A140	NAN	NANT	0	1.39	OP17
11	2pxd_B_A140_C141	AAA	AA08	58	0.28	AA08
12	2pxd_B_C141_C142	AAA	AA04	38	0.53	AA04
13	2pxd_B_C142_A143	OPN	OP06	15	0.78	OP06
14	2pxd_B_A143_G144	NAN	NANT	0	0.70	OP29
15	2pxd_B_G144_G145	AAA	AA00	78	0.18	AA00
16	2pxd_B_G145_U146	AAA	AA00	86	0.15	AA00
17	2pxd_B_U146_C147	AAA	AA08	73	0.46	AA08
18	2pxd_B_C147_A148	AAu	AA13	81	0.23	AA13
19	2pxd_B_A148_G149	AAA	AA08	24	0.50	AA08
20	2pxd_B_G149_G150	AAA	AA00	56	0.37	AA00
21	2pxd_B_G150_U151	AAA	AA00	67	0.28	AA00
22	2pxd_B_U151_C152	AAA	AA00	66	0.30	AA00
23	2pxd_B_C152_C153	AAA	AA08	89	0.14	AA08
24	2pxd_B_C153_G154	AAA	AA00	69	0.26	AA00
25	2pxd_B_G154_A155	OPN	OP04	56	0.34	OP04
26	2pxd_B_A155_A156	AAA	AA00	59	0.37	AA00
27	2pxd_B_A156_A157	AAA	AA00	18	0.41	AA00
28	2pxd_B_A157_G158	AAw	AA05	73	0.29	AA05
29	2pxd_B_G158_G159	AAw	AA06	81	0.20	AA06
30	2pxd_B_G159_A160	AAA	AA08	16	0.35	AA08
31	2pxd_B_A160_A161	AAA	AA00	64	0.26	AA00
32	2pxd_B_A161_G162	AAA	AA08	36	0.47	AA08
33	2pxd_B_G162_C163	AAu	AA13	82	0.17	AA13
34	2pxd_B_C163_A164	AAA	AA00	80	0.25	AA00
35	2pxd_B_A164_G165	AAA	AA00	61	0.45	AA00
36	2pxd_B_G165_C166	AAA	AA00	61	0.28	AA00
37	2pxd_B_C166_C167	AAA	AA00	83	0.21	AA00
38	2pxd_B_C167_A168	AAA	AA00	33	0.39	AA00
39	2pxd_B_A168_A169	AAA	AA00	51	0.30	AA00
40	2pxd_B_A169_G170	AAA	AA00	86	0.14	AA00
41	2pxd_B_G170_G171	AAA	AA00	86	0.21	AA00
42	2pxd_B_G171_C172	AAA	AA00	63	0.28	AA00
43	2pxd_B_C172_A173	AAw	AA01	96	0.12	AA01
44	2pxd_B_A173_G174	AAA	AA00	85	0.15	AA00
45	2pxd_B_G174_U175	AAA	AA00	81	0.20	AA00
46	2pxd_B_U175_U176	AAA	AA00	86	0.19	AA00
47	2pxd_B_U176_C177	AAA	AA00	92	0.17	AA00
48	2pxd_B_C177_C178	AAA	AA00	78	0.25	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 48 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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