DNATCO v4.1: results

Hepatitis Delta Virus ribozyme precursor structure, with C75U mutation, bound to Tl+ and cobalt hexammine (Co(NH3)63+)

Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2oj3_B_U100_G101	NAN	NANT	0	2.51	OP01
02	2oj3_B_G101_G102	NAN	NANT	0	0.60	AA08
03	2oj3_B_G102_C103	AAA	AA00	56	0.34	AA00
04	2oj3_B_C103_C104	AAA	AA00	62	0.34	AA00
05	2oj3_B_C104_G105	AAA	AA00	85	0.22	AA00
06	2oj3_B_G105_G106	AAA	AA00	60	0.25	AA00
07	2oj3_B_G106_C107	AAA	AA00	74	0.16	AA00
08	2oj3_B_C107_A108	AAA	AA00	87	0.14	AA00
09	2oj3_B_A108_U109	AAA	AA00	67	0.31	AA00
10	2oj3_B_U109_G110	NAN	NANT	0	1.35	OP17
11	2oj3_B_G110_G111	AAA	AA00	61	0.31	AA00
12	2oj3_B_G111_U112	AAA	AA00	83	0.11	AA00
13	2oj3_B_U112_C113	AAA	AA00	71	0.21	AA00
14	2oj3_B_C113_C114	AAA	AA00	76	0.22	AA00
15	2oj3_B_C114_C115	AAA	AA00	84	0.26	AA00
16	2oj3_B_C115_A116	AAA	AA00	61	0.28	AA00
17	2oj3_B_A116_G117	AAA	AA00	95	0.10	AA00
18	2oj3_B_G117_C118	AAA	AA00	56	0.30	AA00
19	2oj3_B_C118_C119	AAA	AA00	50	0.18	AA00
20	2oj3_B_C119_U120	A-B	AB05	83	0.20	AB05
21	2oj3_B_U120_C121	OPN	OP14	54	0.44	OP14
22	2oj3_B_C121_C122	AAw	AA01	62	0.27	AA01
23	2oj3_B_C122_U123	NAN	NANT	0	2.14	OP27
24	2oj3_B_U123_C124	NAN	NANT	0	1.31	OP31
25	2oj3_B_C124_G125	NAN	NANT	0	1.20	BA16
26	2oj3_B_G125_C126	NAN	NANT	0	1.42	OP24
27	2oj3_B_C126_U127	NAN	NANT	0	0.66	OP30
28	2oj3_B_U127_G128	NAN	NANT	0	1.19	OP31
29	2oj3_B_G128_G129	AAA	AA08	95	0.20	AA08
30	2oj3_B_G129_C130	AAA	AA00	88	0.16	AA00
31	2oj3_B_C130_G131	NAN	NANT	0	1.09	OP31
32	2oj3_B_G131_C132	AAA	AA00	41	0.29	AA00
33	2oj3_B_C132_C133	AAA	AA00	78	0.23	AA00
34	2oj3_B_C133_G134	AAA	AA00	69	0.29	AA00
35	2oj3_B_G134_G135	AAA	AA00	84	0.15	AA00
36	2oj3_B_G135_C136	AAA	AA00	34	0.37	AA00
37	2oj3_B_C136_U137	AAA	AA08	60	0.39	AA08
38	2oj3_B_U137_G138	AAu	AA12	77	0.27	AA12
39	2oj3_B_G138_G139	AAA	AA00	52	0.32	AA00
40	2oj3_B_G139_G140	AAA	AA00	81	0.22	AA00
41	2oj3_B_G140_C141	NAN	NANT	0	0.68	BB12
42	2oj3_B_C141_A142	NAN	NANT	0	0.48	OP26
43	2oj3_B_A142_A143	AAA	AA00	79	0.11	AA00
44	2oj3_B_A143_C144	AAA	AA00	94	0.15	AA00
45	2oj3_B_C144_A145	AAA	AA00	96	0.18	AA00
46	2oj3_B_A145_C146	AAA	AA00	92	0.14	AA00
47	2oj3_B_C146_C147	AAA	AA00	95	0.17	AA00
48	2oj3_B_C147_A148	AAA	AA00	62	0.26	AA00
49	2oj3_B_A148_U149	AAA	AA00	80	0.22	AA00
50	2oj3_B_U149_U150	ICL	IC02	94	0.14	IC02
51	2oj3_B_U150_G151	ZZZ	ZZ02	68	0.62	ZZ02
52	2oj3_B_G151_C152	NAN	NANT	0	0.77	IC02
53	2oj3_B_C152_A153	NAN	NANT	0	1.17	AA04
54	2oj3_B_A153_C154	AAA	AA00	56	0.22	AA00
55	2oj3_B_C154_U155	NAN	NANT	0	1.09	OP30
56	2oj3_B_U155_C156	NAN	NANT	0	0.66	AA12
57	2oj3_B_C156_C157	AAA	AA00	47	0.36	AA00
58	2oj3_B_C157_G158	NAN	NANT	0	1.55	OP11
59	2oj3_B_G158_G159	AAA	AA00	82	0.23	AA00
60	2oj3_B_G159_U160	AAA	AA00	94	0.13	AA00
61	2oj3_B_U160_G161	AAA	AA00	87	0.17	AA00
62	2oj3_B_G161_G162	AAA	AA08	63	0.33	AA08
63	2oj3_B_G162_U163	NAN	NANT	0	1.76	AA13
64	2oj3_B_U163_G164	NAN	NANT	0	2.01	OP14
65	2oj3_B_G164_A165	NAN	NANT	0	1.81	OP16
66	2oj3_B_A165_A166	AAA	AA09	68	0.23	AA09
67	2oj3_B_A166_U167	NAN	NANT	0	0.60	IC07
68	2oj3_B_U167_G168	AAw	AA01	14	0.41	AA01
69	2oj3_B_G168_G169	AAA	AA00	93	0.14	AA00
70	2oj3_B_G169_G170	AAA	AA00	90	0.26	AA00
71	2oj3_B_G170_A171	AAA	AA00	63	0.24	AA00
72	2oj3_B_A171_C172	AAw	AA01	47	0.29	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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