DNATCO v4.1: results

Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA

Results of the assignment of 61 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2nqp_F_G5_G6	AAw	AA01	67	0.27	AA01
02	2nqp_F_G6_A7	NAN	NANT	0	0.64	AA10
03	2nqp_F_A7_U8	NAN	NANT	0	1.11	OP01
04	2nqp_F_U8_G9	NAN	NANT	0	0.65	IC07
05	2nqp_F_G9_G10	NAN	NANT	0	1.41	OP25
06	2nqp_F_G10_U11	AAA	AA00	82	0.20	AA00
07	2nqp_F_U11_G12	AAw	AA06	87	0.15	AA06
08	2nqp_F_G12_G13	AAA	AA08	49	0.61	AA08
09	2nqp_F_G13_A14	NAN	NANT	0	0.74	AA01
10	2nqp_F_A14_A15	AAw	AA01	49	0.36	AA01
11	2nqp_F_A15_U16	NAN	NANT	0	0.75	OP06
12	2nqp_F_U16_C17	NAN	NANT	0	1.61	IC07
13	2nqp_F_C17_G18	NAN	NANT	0	1.46	OP06
14	2nqp_F_G18_G19	NAN	NANT	0	0.96	IC04
15	2nqp_F_G19_U20	NAN	NANT	0	0.81	OP08
16	2nqp_F_A20.A_G21	AAA	AA00	43	0.40	AA00
17	2nqp_F_U20_A20.A	NAN	NANT	0	1.85	OP27
18	2nqp_F_G21_A22	OPN	OP01	59	0.39	OP01
19	2nqp_F_A22_C23	AAA	AA04	19	0.72	AA04
20	2nqp_F_C23_A24	AAA	AA00	72	0.16	AA00
21	2nqp_F_A24_C25	AAA	AA08	86	0.15	AA08
22	2nqp_F_C25_A26	AAw	AA10	33	0.25	AA10
23	2nqp_F_A26_A27	AAA	AA08	65	0.33	AA08
24	2nqp_F_A27_G28	AAA	AA00	94	0.11	AA00
25	2nqp_F_G28_G29	AAA	AA00	87	0.15	AA00
26	2nqp_F_G29_G30	AAA	AA00	80	0.17	AA00
27	2nqp_F_G30_A31	AAA	AA00	76	0.18	AA00
28	2nqp_F_A37_A38	AAA	AA08	66	0.36	AA08
29	2nqp_F_A38_U39	AAA	AA00	62	0.26	AA00
30	2nqp_F_U39_C40	AAA	AA00	73	0.38	AA00
31	2nqp_F_C40_C41	AAw	AA06	46	0.30	AA06
32	2nqp_F_C41_C42	AAA	AA08	76	0.27	AA08
33	2nqp_F_C42_U43	AAA	AA00	85	0.16	AA00
34	2nqp_F_U43_C44	AAA	AA00	70	0.19	AA00
35	2nqp_F_C44_G45.A	NAN	NANT	0	0.38	OP30
36	2nqp_F_C45.C_G45.D	NAN	NANT	0	0.77	AA10
37	2nqp_F_G45.A_G45.B	AAA	AA00	85	0.22	AA00
38	2nqp_F_G45.B_C45.C	AAw	AA01	89	0.21	AA01
39	2nqp_F_G45.D_U45.E	NAN	NANT	0	0.73	AA03
40	2nqp_F_C46.K_U46.L	AAA	AA08	62	0.22	AA08
41	2nqp_F_G46.J_C46.K	AAA	AA00	85	0.19	AA00
42	2nqp_F_U46.L_G47	AAw	AA01	32	0.19	AA01
43	2nqp_F_G47_U48	NAN	NANT	0	1.61	OP30
44	2nqp_F_U48_G49	NAN	NANT	0	1.56	OP05
45	2nqp_F_G49_C50	AAA	AA08	56	0.33	AA08
46	2nqp_F_C50_G51	AAw	AA11	63	0.42	AA11
47	2nqp_F_G51_G52	AAA	AA00	24	0.43	AA00
48	2nqp_F_G52_G53	AAA	AA00	79	0.35	AA00
49	2nqp_F_G53_U54	AAA	AA00	80	0.15	AA00
50	2nqp_F_U54_U55	AAA	AA00	51	0.37	AA00
51	2nqp_F_U55_C56	OPN	OP04	67	0.15	OP04
52	2nqp_F_C56_A57	AAA	AA00	63	0.46	AA00
53	2nqp_F_A57_A58	NAN	NANT	0	0.39	IC01
54	2nqp_F_A58_G59	NAN	NANT	0	1.14	OP18
55	2nqp_F_G59_U60	NAN	NANT	0	0.74	AA04
56	2nqp_F_U60_C61	NAN	NANT	0	1.48	OP07
57	2nqp_F_C61_C62	AAA	AA04	27	0.52	AA04
58	2nqp_F_C62_C63	AAA	AA00	72	0.18	AA00
59	2nqp_F_C63_G64	AAA	AA00	17	0.42	AA00
60	2nqp_F_U66_C67	AAA	AA00	93	0.20	AA00
61	2nqp_F_C67_C68	AAw	AA01	32	0.36	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 61 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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