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Conformers: ABBIImiBZICOPNSYNN
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Drosophila Nucleosome Structure

Results of the assignment of 290 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0012nqb_I_DA1_DT2B12BB04710.26 BB04
0022nqb_I_DT2_DC3NANNANT00.62 BB2S
0032nqb_I_DC3_DA4SYNBBS1580.44 BBS1
0042nqb_I_DA4_DA5B12BB04950.14 BB04
0052nqb_I_DA5_DT6BBwBB02960.08 BB02
0062nqb_I_DT6_DA7BBBBB00570.34 BB00
0072nqb_I_DA7_DT8BBBBB00750.25 BB00
0082nqb_I_DT8_DC9BBBBB00300.36 BB00
0092nqb_I_DC9_DC10BBBBB00770.22 BB00
0102nqb_I_DC10_DA11B12BB04540.26 BB04
0112nqb_I_DA11_DC12BBBBB00820.20 BB00
0122nqb_I_DC12_DC13BBBBB00750.32 BB00
0132nqb_I_DC13_DT14BBBBB00810.23 BB00
0142nqb_I_DT14_DG15BB2BB07540.29 BB07
0152nqb_I_DG15_DC16BBBBB00600.30 BB00
0162nqb_I_DC16_DA17BB2BB07330.36 BB07
0172nqb_I_DA17_DG18BBBBB00850.17 BB00
0182nqb_I_DG18_DA19B12BB04930.16 BB04
0192nqb_I_DA19_DT20B12BB04820.23 BB04
0202nqb_I_DT20_DT21BBBBB00680.31 BB00
0212nqb_I_DT21_DC22miBBB13690.22 BB13
0222nqb_I_DC22_DT23BBwBB16410.42 BB16
0232nqb_I_DT23_DA24BBBBB00200.32 BB00
0242nqb_I_DA24_DC25B12BB04930.20 BB04
0252nqb_I_DC25_DC26NANNANT00.40 BB02
0262nqb_I_DC26_DA27BB2BB07310.51 BB07
0272nqb_I_DA27_DA28BBBBB00300.33 BB00
0282nqb_I_DA28_DA29BBwBB02360.43 BB02
0292nqb_I_DA29_DA30BBBBB00680.37 BB00
0302nqb_I_DA30_DG31B12BB04800.17 BB04
0312nqb_I_DG31_DT32BBBBB00290.49 BB00
0322nqb_I_DT32_DG33BBBBB00800.23 BB00
0332nqb_I_DG33_DT34NANNANT00.38 BB13
0342nqb_I_DT34_DA35BBBBB00540.50 BB00
0352nqb_I_DA35_DT36BBBBB00810.26 BB00
0362nqb_I_DT36_DT37BBBBB00640.35 BB00
0372nqb_I_DT37_DT38BBBBB00890.27 BB00
0382nqb_I_DT38_DG39BB2BB07840.29 BB07
0392nqb_I_DG39_DG40BBBBB00800.27 BB00
0402nqb_I_DG40_DA41BB2BB07960.23 BB07
0412nqb_I_DA41_DA42BBBBB00930.14 BB00
0422nqb_I_DA42_DA43BBBBB00810.24 BB00
0432nqb_I_DA43_DC44BBBBB00890.24 BB00
0442nqb_I_DC44_DT45BBBBB00420.43 BB00
0452nqb_I_DT45_DG46B12BB04860.21 BB04
0462nqb_I_DG46_DC47B12BB04790.22 BB04
0472nqb_I_DC47_DT48BBwBB02520.38 BB02
0482nqb_I_DT48_DC49BBBBB00420.56 BB00
0492nqb_I_DC49_DC50BB2BB07780.20 BB07
0502nqb_I_DC50_DA51BBBBB00720.34 BB00
0512nqb_I_DA51_DT52BBBBB00900.13 BB00
0522nqb_I_DT52_DC53BBBBB00700.30 BB00
0532nqb_I_DC53_DA54BBBBB00630.32 BB00
0542nqb_I_DA54_DA55BBBBB00880.16 BB00
0552nqb_I_DA55_DA56B12BB04880.17 BB04
0562nqb_I_DA56_DA57BBBBB00680.30 BB00
0572nqb_I_DA57_DG58BBBBB00680.34 BB00
0582nqb_I_DG58_DG59BB2BB07650.38 BB07
0592nqb_I_DG59_DC60BBBBB00760.24 BB00
0602nqb_I_DC60_DA61B12BB04800.26 BB04
0612nqb_I_DA61_DT62BBBBB00830.18 BB00
0622nqb_I_DT62_DG63B12BB04870.25 BB04
0632nqb_I_DG63_DT64BBBBB00750.33 BB00
0642nqb_I_DT64_DT65BBBBB00880.15 BB00
0652nqb_I_DT65_DC66BBBBB00790.16 BB00
0662nqb_I_DC66_DA67BB2BB07860.26 BB07
0672nqb_I_DA67_DG68BBBBB00770.22 BB00
0682nqb_I_DG68_DC69BB2BB07850.22 BB07
0692nqb_I_DC69_DG70BBBBB00850.25 BB00
0702nqb_I_DG70_DG71BBBBB00810.19 BB00
0712nqb_I_DG71_DA72BB2BB07550.24 BB07
0722nqb_I_DA72_DA73BBwBB02850.22 BB02
0732nqb_I_DA73_DT74BBBBB00820.20 BB00
0742nqb_I_DT74_DT75BBBBB00920.18 BB00
0752nqb_I_DT75_DC76BBBBB00820.21 BB00
0762nqb_I_DC76_DC77BB2BB07820.16 BB07
0772nqb_I_DC77_DG78BBBBB00670.27 BB00
0782nqb_I_DG78_DC79BB2BB07860.23 BB07
0792nqb_I_DC79_DT80B12BB04670.36 BB04
0802nqb_I_DT80_DG81B12BB04730.20 BB04
0812nqb_I_DG81_DA82BBBBB00940.14 BB00
0822nqb_I_DA82_DA83BBBBB00960.10 BB00
0832nqb_I_DA83_DC84BBBBB00690.22 BB00
0842nqb_I_DC84_DA85B12BB04900.14 BB04
0852nqb_I_DA85_DT86BBBBB00930.16 BB00
0862nqb_I_DT86_DG87BBBBB00710.23 BB00
0872nqb_I_DG87_DC88BB2BB07370.30 BB07
0882nqb_I_DC88_DC89B12BB04700.40 BB04
0892nqb_I_DC89_DT90BB2BB07730.24 BB07
0902nqb_I_DT90_DT91BBBBB00930.12 BB00
0912nqb_I_DT91_DT92BBBBB00920.13 BB00
0922nqb_I_DT92_DT93BBBBB00800.17 BB00
0932nqb_I_DT93_DG94BBwBB02510.27 BB02
0942nqb_I_DG94_DA95B12BB04680.19 BB04
0952nqb_I_DA95_DT96BBBBB00660.35 BB00
0962nqb_I_DT96_DG97B12BB04870.21 BB04
0972nqb_I_DG97_DG98BBBBB00920.17 BB00
0982nqb_I_DG98_DA99BB2BB07840.30 BB07
0992nqb_I_DA99_DG100BBBBB00890.22 BB00
1002nqb_I_DG100_DC101BB2BB07720.17 BB07
1012nqb_I_DC101_DA102BBBBB00740.26 BB00
1022nqb_I_DA102_DG103BBBBB00900.22 BB00
1032nqb_I_DG103_DT104BBBBB00830.24 BB00
1042nqb_I_DT104_DT105B12BB04880.26 BB04
1052nqb_I_DT105_DT106BBBBB00870.26 BB00
1062nqb_I_DT106_DC107BBBBB00840.24 BB00
1072nqb_I_DC107_DC108BB2BB07750.30 BB07
1082nqb_I_DC108_DA109B12BB04470.37 BB04
1092nqb_I_DA109_DA110BBBBB00910.12 BB00
1102nqb_I_DA110_DA111B12BB04850.09 BB04
1112nqb_I_DA111_DT112BBBBB00600.33 BB00
1122nqb_I_DT112_DA113BBBBB00690.30 BB00
1132nqb_I_DA113_DC114miBBB13500.34 BB13
1142nqb_I_DC114_DA115BBBBB00530.47 BB00
1152nqb_I_DA115_DC116BBBBB00940.17 BB00
1162nqb_I_DC116_DT117BBBBB00670.33 BB00
1172nqb_I_DT117_DT118BBBBB00900.19 BB00
1182nqb_I_DT118_DT119BBBBB00860.23 BB00
1192nqb_I_DT119_DT120BB2BB07750.16 BB07
1202nqb_I_DT120_DG121B12BB04750.28 BB04
1212nqb_I_DG121_DG122BBBBB00810.24 BB00
1222nqb_I_DG122_DT123BBBBB00740.14 BB00
1232nqb_I_DT123_DA124BB2BB07630.26 BB07
1242nqb_I_DA124_DG125B12BB04820.32 BB04
1252nqb_I_DG125_DA126BBBBB00340.47 BB00
1262nqb_I_DA126_DA127BBBBB00180.52 BB00
1272nqb_I_DA127_DT128BBBBB00670.39 BB00
1282nqb_I_DT128_DC129BBBBB00610.26 BB00
1292nqb_I_DC129_DT130BBBBB00820.24 BB00
1302nqb_I_DT130_DG131BB2BB07870.23 BB07
1312nqb_I_DG131_DC132BBBBB00780.20 BB00
1322nqb_I_DC132_DA133BB2BB07920.21 BB07
1332nqb_I_DA133_DG134NANNANT00.43 BB05
1342nqb_I_DG134_DG135BBBBB00630.44 BB00
1352nqb_I_DG135_DT136BBBBB00620.42 BB00
1362nqb_I_DT136_DG137BBBBB00510.28 BB00
1372nqb_I_DG137_DG138BBBBB00730.20 BB00
1382nqb_I_DG138_DA139B12BB04830.16 BB04
1392nqb_I_DA139_DT140BBBBB00950.15 BB00
1402nqb_I_DT140_DA141B12BB04790.19 BB04
1412nqb_I_DA141_DT142BBBBB00840.20 BB00
1422nqb_I_DT142_DT143BBBBB00890.16 BB00
1432nqb_I_DT143_DG144BBBBB00880.20 BB00
1442nqb_I_DG144_DA145B12BB04870.11 BB04
1452nqb_I_DA145_DT146BBBBB00910.12 BB00
1462nqb_J_DA147_DT148BBBBB00590.27 BB00
1472nqb_J_DT148_DC149miBBB13250.50 BB13
1482nqb_J_DC149_DA150NANNANT00.67 AB02
1492nqb_J_DA150_DA151B12BB04880.16 BB04
1502nqb_J_DA151_DT152BBwBB02920.10 BB02
1512nqb_J_DT152_DA153BBBBB00720.30 BB00
1522nqb_J_DA153_DT154BBBBB00920.17 BB00
1532nqb_J_DT154_DC155BBBBB00930.11 BB00
1542nqb_J_DC155_DC156B12BB04860.20 BB04
1552nqb_J_DC156_DA157B12BB04870.20 BB04
1562nqb_J_DA157_DC158BBBBB00810.18 BB00
1572nqb_J_DC158_DC159BBBBB00960.16 BB00
1582nqb_J_DC159_DT160BBBBB00710.31 BB00
1592nqb_J_DT160_DG161BB2BB07870.24 BB07
1602nqb_J_DG161_DC162BBBBB00700.21 BB00
1612nqb_J_DC162_DA163BB2BB07730.38 BB07
1622nqb_J_DA163_DG164BBBBB00720.23 BB00
1632nqb_J_DG164_DA165B12BB04920.14 BB04
1642nqb_J_DA165_DT166B12BB04750.26 BB04
1652nqb_J_DT166_DT167BBBBB00520.39 BB00
1662nqb_J_DT167_DC168BBBBB00710.30 BB00
1672nqb_J_DC168_DT169BBBBB00680.28 BB00
1682nqb_J_DT169_DA170B12BB04960.15 BB04
1692nqb_J_DA170_DC171NANNANT00.45 BB00
1702nqb_J_DC171_DC172BBBBB00610.23 BB00
1712nqb_J_DC172_DA173BB2BB07750.44 BB07
1722nqb_J_DA173_DA174BBBBB00700.25 BB00
1732nqb_J_DA174_DA175NANNANT00.42 BB02
1742nqb_J_DA175_DA176BBBBB00730.31 BB00
1752nqb_J_DA176_DG177BBBBB00880.21 BB00
1762nqb_J_DG177_DT178BBBBB00870.22 BB00
1772nqb_J_DT178_DG179BBBBB00750.35 BB00
1782nqb_J_DG179_DT180BBBBB00440.42 BB00
1792nqb_J_DT180_DA181BBBBB00850.21 BB00
1802nqb_J_DA181_DT182BBBBB00660.31 BB00
1812nqb_J_DT182_DT183BBBBB00740.29 BB00
1822nqb_J_DT183_DT184BBBBB00960.12 BB00
1832nqb_J_DT184_DG185BB2BB07800.29 BB07
1842nqb_J_DG185_DG186BBBBB00790.32 BB00
1852nqb_J_DG186_DA187BB2BB07930.29 BB07
1862nqb_J_DA187_DA188BBBBB00890.21 BB00
1872nqb_J_DA188_DA189BBBBB00820.26 BB00
1882nqb_J_DA189_DC190BBBBB00800.29 BB00
1892nqb_J_DC190_DT191BBBBB00660.32 BB00
1902nqb_J_DT191_DG192B12BB04700.32 BB04
1912nqb_J_DG192_DC193BBBBB00870.20 BB00
1922nqb_J_DC193_DT194BB2BB07700.29 BB07
1932nqb_J_DT194_DC195BBBBB00670.33 BB00
1942nqb_J_DC195_DC196BB2BB07580.20 BB07
1952nqb_J_DC196_DA197BBBBB00850.26 BB00
1962nqb_J_DA197_DT198BBBBB00630.29 BB00
1972nqb_J_DT198_DC199B12BB04810.19 BB04
1982nqb_J_DC199_DA200BBBBB00100.47 BB00
1992nqb_J_DA200_DA201BBBBB00900.17 BB00
2002nqb_J_DA201_DA202B12BB04880.10 BB04
2012nqb_J_DA202_DA203BBBBB00760.23 BB00
2022nqb_J_DA203_DG204BB2BB07720.14 BB07
2032nqb_J_DG204_DG205BB2BB07870.21 BB07
2042nqb_J_DG205_DC206BBBBB00910.15 BB00
2052nqb_J_DC206_DA207B12BB04900.15 BB04
2062nqb_J_DA207_DT208BBBBB00890.15 BB00
2072nqb_J_DT208_DG209BBBBB00870.19 BB00
2082nqb_J_DG209_DT210BBBBB00760.30 BB00
2092nqb_J_DT210_DT211BBBBB00940.13 BB00
2102nqb_J_DT211_DC212BBBBB00870.14 BB00
2112nqb_J_DC212_DA213BBBBB00760.22 BB00
2122nqb_J_DA213_DG214BB2BB07900.24 BB07
2132nqb_J_DG214_DC215BBBBB00820.24 BB00
2142nqb_J_DC215_DG216BB2BB07900.19 BB07
2152nqb_J_DG216_DG217BBBBB00860.26 BB00
2162nqb_J_DG217_DA218BBBBB00880.19 BB00
2172nqb_J_DA218_DA219B12BB04880.13 BB04
2182nqb_J_DA219_DT220BBBBB00850.23 BB00
2192nqb_J_DT220_DT221BBBBB00800.16 BB00
2202nqb_J_DT221_DC222BBBBB00890.19 BB00
2212nqb_J_DC222_DC223B12BB04870.17 BB04
2222nqb_J_DC223_DG224BB2BB07860.17 BB07
2232nqb_J_DG224_DC225BBBBB00930.08 BB00
2242nqb_J_DC225_DT226BB2BB07620.20 BB07
2252nqb_J_DT226_DG227B12BB05260.48 BB05
2262nqb_J_DG227_DA228BBBBB00720.35 BB00
2272nqb_J_DA228_DA229BBBBB00930.13 BB00
2282nqb_J_DA229_DC230BBBBB00850.20 BB00
2292nqb_J_DC230_DA231B12BB04760.30 BB04
2302nqb_J_DA231_DT232BBBBB00350.26 BB00
2312nqb_J_DT232_DG233B12BB04220.35 BB04
2322nqb_J_DG233_DC234BBBBB00520.38 BB00
2332nqb_J_DC234_DC235BB2BB07190.32 BB07
2342nqb_J_DC235_DT236B12BB04810.24 BB04
2352nqb_J_DT236_DT237BBBBB00600.28 BB00
2362nqb_J_DT237_DT238BBBBB00950.14 BB00
2372nqb_J_DT238_DT239BBBBB00970.12 BB00
2382nqb_J_DT239_DG240BBBBB00730.27 BB00
2392nqb_J_DG240_DA241BBBBB00430.42 BB00
2402nqb_J_DA241_DT242BBBBB00550.31 BB00
2412nqb_J_DT242_DG243BBwBB11610.39 BB11
2422nqb_J_DG243_DG244BBBBB00760.29 BB00
2432nqb_J_DG244_DA245BB2BB07980.18 BB07
2442nqb_J_DA245_DG246BBBBB00820.23 BB00
2452nqb_J_DG246_DC247BB2BB07820.26 BB07
2462nqb_J_DC247_DA248BBwBB03700.15 BB03
2472nqb_J_DA248_DG249BBBBB00820.34 BB00
2482nqb_J_DG249_DT250BBBBB00130.39 BB00
2492nqb_J_DT250_DT251BBBBB00790.30 BB00
2502nqb_J_DT251_DT252BBBBB00820.26 BB00
2512nqb_J_DT252_DC253BBBBB00710.36 BB00
2522nqb_J_DC253_DC254BB2BB07830.19 BB07
2532nqb_J_DC254_DA255BB2BB07770.26 BB07
2542nqb_J_DA255_DA256BBBBB00850.15 BB00
2552nqb_J_DA256_DA257B12BB04820.09 BB04
2562nqb_J_DA257_DT258BBwBB03240.51 BB03
2572nqb_J_DT258_DA259BBBBB00410.53 BB00
2582nqb_J_DA259_DC260BBBBB00690.24 BB00
2592nqb_J_DC260_DA261B12BB04720.30 BB04
2602nqb_J_DA261_DC262BBwBB02670.28 BB02
2612nqb_J_DC262_DT263BBBBB00940.17 BB00
2622nqb_J_DT263_DT264BBBBB00920.19 BB00
2632nqb_J_DT264_DT265BBBBB00690.29 BB00
2642nqb_J_DT265_DT266BBBBB00760.32 BB00
2652nqb_J_DT266_DG267B12BB04670.31 BB04
2662nqb_J_DG267_DG268BBwBB02780.26 BB02
2672nqb_J_DG268_DT269BBBBB00640.23 BB00
2682nqb_J_DT269_DA270BB2BB07660.27 BB07
2692nqb_J_DA270_DG271BBBBB00530.43 BB00
2702nqb_J_DG271_DA272BB2BB07480.58 BB07
2712nqb_J_DA272_DA273BBBBB00720.28 BB00
2722nqb_J_DA273_DT274BBBBB00850.28 BB00
2732nqb_J_DT274_DC275BBBBB00790.25 BB00
2742nqb_J_DC275_DT276BBBBB00750.28 BB00
2752nqb_J_DT276_DG277BB2BB07730.32 BB07
2762nqb_J_DG277_DC278BBBBB00830.19 BB00
2772nqb_J_DC278_DA279BB2BB07970.23 BB07
2782nqb_J_DA279_DG280BBBBB00780.30 BB00
2792nqb_J_DG280_DG281B12BB04640.32 BB04
2802nqb_J_DG281_DT282BBBBB00240.43 BB00
2812nqb_J_DT282_DG283BBBBB00790.20 BB00
2822nqb_J_DG283_DG284B12BB04890.20 BB04
2832nqb_J_DG284_DA285B12BB04590.35 BB04
2842nqb_J_DA285_DT286BBBBB00790.20 BB00
2852nqb_J_DT286_DA287miBBB12620.32 BB12
2862nqb_J_DA287_DT288BBwBB16850.33 BB16
2872nqb_J_DT288_DT289BBwBB02870.20 BB02
2882nqb_J_DT289_DG290BBBBB00730.31 BB00
2892nqb_J_DG290_DA291B12BB04890.15 BB04
2902nqb_J_DA291_DT292BBBBB00940.19 BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

Return up to random steps in PDB structures ( include large structures )

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