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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
NMR structure of i6A37_tyrASL

Results of the assignment of 128 detected steps in 8 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0012lbq-m1_A_G1_G2AAAAA02410.46 AA02
0022lbq-m2_A_G1_G2AAAAA02500.41 AA02
0032lbq-m3_A_G1_G2AAAAA02420.46 AA02
0042lbq-m4_A_G1_G2AAAAA02510.42 AA02
0052lbq-m5_A_G1_G2AAAAA02330.48 AA02
0062lbq-m6_A_G1_G2AAAAA02480.42 AA02
0072lbq-m7_A_G1_G2AAAAA02380.48 AA02
0082lbq-m8_A_G1_G2AAAAA02410.47 AA02
0092lbq-m1_A_G2_G3AAAAA04370.27 AA04
0102lbq-m2_A_G2_G3AAAAA0070.38 AA00
0112lbq-m3_A_G2_G3NANNANT00.29 AA04
0122lbq-m4_A_G2_G3AAAAA02180.38 AA02
0132lbq-m5_A_G2_G3AAAAA04610.30 AA04
0142lbq-m6_A_G2_G3AAAAA0090.38 AA00
0152lbq-m7_A_G2_G3AAAAA00100.34 AA00
0162lbq-m8_A_G2_G3AAAAA00100.35 AA00
0172lbq-m1_A_G3_G4AAAAA04470.45 AA04
0182lbq-m2_A_G3_G4AAAAA04450.47 AA04
0192lbq-m3_A_G3_G4AAAAA04420.48 AA04
0202lbq-m4_A_G3_G4AAAAA04540.44 AA04
0212lbq-m5_A_G3_G4AAAAA04530.47 AA04
0222lbq-m6_A_G3_G4AAAAA04400.47 AA04
0232lbq-m7_A_G3_G4AAAAA04500.42 AA04
0242lbq-m8_A_G3_G4AAAAA04510.43 AA04
0252lbq-m1_A_G4_A5AAAAA04390.44 AA04
0262lbq-m2_A_G4_A5AAAAA04360.47 AA04
0272lbq-m3_A_G4_A5AAAAA04380.50 AA04
0282lbq-m4_A_G4_A5AAAAA08210.37 AA08
0292lbq-m5_A_G4_A5AAAAA08200.36 AA08
0302lbq-m6_A_G4_A5AAAAA04310.47 AA04
0312lbq-m7_A_G4_A5AAAAA08120.37 AA08
0322lbq-m8_A_G4_A5AAAAA08170.38 AA08
0332lbq-m1_A_A5_C6AAAAA08350.38 AA08
0342lbq-m2_A_A5_C6AAAAA08460.38 AA08
0352lbq-m3_A_A5_C6AAAAA08100.43 AA08
0362lbq-m4_A_A5_C6AAAAA08500.37 AA08
0372lbq-m5_A_A5_C6AAAAA08180.38 AA08
0382lbq-m6_A_A5_C6AAAAA08430.38 AA08
0392lbq-m7_A_A5_C6AAAAA08550.35 AA08
0402lbq-m8_A_A5_C6AAAAA08530.34 AA08
0412lbq-m1_A_C6_U7AAAAA08130.62 AA08
0422lbq-m2_A_C6_U7AAAAA04280.61 AA04
0432lbq-m3_A_C6_U7NANNANT00.75 AA08
0442lbq-m4_A_C6_U7AAAAA08100.68 AA08
0452lbq-m5_A_C6_U7NANNANT00.75 AA08
0462lbq-m6_A_C6_U7NANNANT00.66 AA04
0472lbq-m7_A_C6_U7AAAAA08110.68 AA08
0482lbq-m8_A_C6_U7AAAAA08110.67 AA08
0492lbq-m1_A_U7_G8NANNANT01.27 AA04
0502lbq-m2_A_U7_G8NANNANT01.27 AA10
0512lbq-m3_A_U7_G8NANNANT01.16 AA04
0522lbq-m4_A_U7_G8NANNANT00.99 AA08
0532lbq-m5_A_U7_G8NANNANT01.14 AA04
0542lbq-m6_A_U7_G8NANNANT01.19 AA04
0552lbq-m7_A_U7_G8NANNANT01.00 AA08
0562lbq-m8_A_U7_G8NANNANT01.00 AA08
0572lbq-m1_A_G8_U9NANNANT01.11 ZZ02
0582lbq-m2_A_G8_U9NANNANT00.79 OP28
0592lbq-m3_A_G8_U9NANNANT01.00 OP24
0602lbq-m4_A_G8_U9NANNANT00.97 AB02
0612lbq-m5_A_G8_U9NANNANT00.97 OP24
0622lbq-m6_A_G8_U9NANNANT01.04 OP24
0632lbq-m7_A_G8_U9NANNANT00.98 AB02
0642lbq-m8_A_G8_U9NANNANT00.97 AB02
0652lbq-m1_A_U9_A10NANNANT01.54 OP08
0662lbq-m2_A_U9_A10NANNANT01.55 OP08
0672lbq-m3_A_U9_A10NANNANT01.04 OP08
0682lbq-m4_A_U9_A10NANNANT01.66 OP08
0692lbq-m5_A_U9_A10NANNANT01.04 OP08
0702lbq-m6_A_U9_A10NANNANT01.26 OP08
0712lbq-m7_A_U9_A10NANNANT01.64 OP08
0722lbq-m8_A_U9_A10NANNANT01.64 OP08
0732lbq-m1_A_A10_6IA11AAAAA08180.58 AA08
0742lbq-m2_A_A10_6IA11AAAAA08200.60 AA08
0752lbq-m3_A_A10_6IA11NANNANT00.54 AA08
0762lbq-m4_A_A10_6IA11NANNANT00.56 AA08
0772lbq-m5_A_A10_6IA11NANNANT00.58 AA04
0782lbq-m6_A_A10_6IA11AAAAA08170.61 AA08
0792lbq-m7_A_A10_6IA11NANNANT00.61 AA04
0802lbq-m8_A_A10_6IA11NANNANT00.59 AA04
0812lbq-m1_A_6IA11_A12AAwAA1070.52 AA10
0822lbq-m2_A_6IA11_A12AAwAA1070.53 AA10
0832lbq-m3_A_6IA11_A12AAwAA1090.46 AA10
0842lbq-m4_A_6IA11_A12AAAAA04380.44 AA04
0852lbq-m5_A_6IA11_A12AAAAA04410.41 AA04
0862lbq-m6_A_6IA11_A12AAwAA1060.54 AA10
0872lbq-m7_A_6IA11_A12AAAAA04420.42 AA04
0882lbq-m8_A_6IA11_A12AAAAA04400.42 AA04
0892lbq-m1_A_A12_U13AAAAA08120.34 AA08
0902lbq-m2_A_A12_U13AAAAA04270.46 AA04
0912lbq-m3_A_A12_U13AAAAA04350.41 AA04
0922lbq-m4_A_A12_U13AAAAA08250.33 AA08
0932lbq-m5_A_A12_U13AAAAA08120.34 AA08
0942lbq-m6_A_A12_U13AAAAA04330.46 AA04
0952lbq-m7_A_A12_U13AAAAA08260.33 AA08
0962lbq-m8_A_A12_U13AAAAA08430.31 AA08
0972lbq-m1_A_U13_C14NANNANT00.59 AA04
0982lbq-m2_A_U13_C14NANNANT00.59 AA04
0992lbq-m3_A_U13_C14NANNANT00.62 AA04
1002lbq-m4_A_U13_C14NANNANT00.50 AA08
1012lbq-m5_A_U13_C14AAAAA08140.42 AA08
1022lbq-m6_A_U13_C14NANNANT00.59 AA04
1032lbq-m7_A_U13_C14NANNANT00.49 AA08
1042lbq-m8_A_U13_C14NANNANT00.51 AA08
1052lbq-m1_A_C14_C15NANNANT00.58 AA04
1062lbq-m2_A_C14_C15NANNANT00.62 AA04
1072lbq-m3_A_C14_C15NANNANT00.63 AA04
1082lbq-m4_A_C14_C15NANNANT00.47 AA08
1092lbq-m5_A_C14_C15NANNANT00.58 AA04
1102lbq-m6_A_C14_C15NANNANT00.62 AA04
1112lbq-m7_A_C14_C15NANNANT00.57 AA04
1122lbq-m8_A_C14_C15NANNANT00.49 AA08
1132lbq-m1_A_C15_C16AAAAA08650.30 AA08
1142lbq-m2_A_C15_C16AAAAA08590.30 AA08
1152lbq-m3_A_C15_C16AAAAA08600.32 AA08
1162lbq-m4_A_C15_C16AAAAA08720.29 AA08
1172lbq-m5_A_C15_C16AAAAA08690.36 AA08
1182lbq-m6_A_C15_C16AAAAA08600.31 AA08
1192lbq-m7_A_C15_C16AAAAA08670.31 AA08
1202lbq-m8_A_C15_C16AAAAA08720.30 AA08
1212lbq-m1_A_C16_C17NANNANT00.63 AA04
1222lbq-m2_A_C16_C17NANNANT00.65 AA04
1232lbq-m3_A_C16_C17NANNANT00.65 AA04
1242lbq-m4_A_C16_C17NANNANT00.61 AA04
1252lbq-m5_A_C16_C17AAAAA08180.44 AA08
1262lbq-m6_A_C16_C17NANNANT00.67 AA04
1272lbq-m7_A_C16_C17NANNANT00.57 AA04
1282lbq-m8_A_C16_C17NANNANT00.59 AA04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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