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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
NMR structure of unmodified_ASL_Tyr

Results of the assignment of 144 detected steps in 9 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0012lac-m1_A_G1_G2AAAAA02280.41 AA02
0022lac-m2_A_G1_G2AAAAA02260.41 AA02
0032lac-m3_A_G1_G2AAAAA02410.41 AA02
0042lac-m4_A_G1_G2AAAAA02240.41 AA02
0052lac-m5_A_G1_G2AAAAA02270.41 AA02
0062lac-m6_A_G1_G2AAAAA02220.41 AA02
0072lac-m7_A_G1_G2AAAAA02260.41 AA02
0082lac-m8_A_G1_G2AAAAA02290.41 AA02
0092lac-m9_A_G1_G2AAAAA02240.41 AA02
0102lac-m1_A_G2_G3NANNANT00.39 AA04
0112lac-m2_A_G2_G3NANNANT00.39 AA04
0122lac-m3_A_G2_G3NANNANT00.36 AA04
0132lac-m4_A_G2_G3NANNANT00.40 AA04
0142lac-m5_A_G2_G3NANNANT00.39 AA04
0152lac-m6_A_G2_G3NANNANT00.40 AA04
0162lac-m7_A_G2_G3NANNANT00.39 AA04
0172lac-m8_A_G2_G3NANNANT00.39 AA04
0182lac-m9_A_G2_G3NANNANT00.39 AA04
0192lac-m1_A_G3_G4AAAAA04320.39 AA04
0202lac-m2_A_G3_G4AAAAA04330.39 AA04
0212lac-m3_A_G3_G4AAAAA04320.38 AA04
0222lac-m4_A_G3_G4AAAAA0070.44 AA00
0232lac-m5_A_G3_G4AAAAA04340.39 AA04
0242lac-m6_A_G3_G4AAAAA04330.39 AA04
0252lac-m7_A_G3_G4AAAAA04340.39 AA04
0262lac-m8_A_G3_G4AAAAA0070.44 AA00
0272lac-m9_A_G3_G4AAAAA04340.39 AA04
0282lac-m1_A_G4_A5AAAAA08280.34 AA08
0292lac-m2_A_G4_A5AAAAA08310.33 AA08
0302lac-m3_A_G4_A5AAAAA08380.34 AA08
0312lac-m4_A_G4_A5AAAAA08230.33 AA08
0322lac-m5_A_G4_A5AAAAA08330.33 AA08
0332lac-m6_A_G4_A5AAAAA04680.33 AA04
0342lac-m7_A_G4_A5AAAAA08270.33 AA08
0352lac-m8_A_G4_A5AAAAA08270.34 AA08
0362lac-m9_A_G4_A5AAAAA08360.34 AA08
0372lac-m1_A_A5_C6AAAAA08440.36 AA08
0382lac-m2_A_A5_C6AAAAA08290.36 AA08
0392lac-m3_A_A5_C6AAAAA08320.35 AA08
0402lac-m4_A_A5_C6AAAAA08470.39 AA08
0412lac-m5_A_A5_C6AAAAA04610.43 AA04
0422lac-m6_A_A5_C6AAAAA08450.36 AA08
0432lac-m7_A_A5_C6AAAAA08460.35 AA08
0442lac-m8_A_A5_C6AAAAA08450.36 AA08
0452lac-m9_A_A5_C6AAAAA08420.35 AA08
0462lac-m1_A_C6_U7AAAAA04340.60 AA04
0472lac-m2_A_C6_U7AAAAA04220.66 AA04
0482lac-m3_A_C6_U7AAAAA04290.65 AA04
0492lac-m4_A_C6_U7AAAAA04360.60 AA04
0502lac-m5_A_C6_U7AAAAA04280.65 AA04
0512lac-m6_A_C6_U7NANNANT00.64 AA04
0522lac-m7_A_C6_U7AAAAA04260.65 AA04
0532lac-m8_A_C6_U7AAAAA04320.61 AA04
0542lac-m9_A_C6_U7NANNANT00.70 AA04
0552lac-m1_A_U7_G8NANNANT01.33 AA04
0562lac-m2_A_U7_G8NANNANT01.21 AA04
0572lac-m3_A_U7_G8NANNANT01.27 AA04
0582lac-m4_A_U7_G8NANNANT01.33 AA04
0592lac-m5_A_U7_G8NANNANT01.29 AA04
0602lac-m6_A_U7_G8NANNANT00.69 AA05
0612lac-m7_A_U7_G8NANNANT01.28 AA04
0622lac-m8_A_U7_G8NANNANT01.33 AA04
0632lac-m9_A_U7_G8NANNANT00.71 AA05
0642lac-m1_A_G8_U9NANNANT01.19 OP24
0652lac-m2_A_G8_U9NANNANT01.10 OP24
0662lac-m3_A_G8_U9NANNANT01.19 OP24
0672lac-m4_A_G8_U9NANNANT01.18 OP24
0682lac-m5_A_G8_U9NANNANT01.19 OP24
0692lac-m6_A_G8_U9NANNANT01.02 OP24
0702lac-m7_A_G8_U9NANNANT01.17 OP24
0712lac-m8_A_G8_U9NANNANT01.21 OP24
0722lac-m9_A_G8_U9NANNANT00.99 OP24
0732lac-m1_A_U9_A10NANNANT01.08 OP09
0742lac-m2_A_U9_A10NANNANT01.06 OP09
0752lac-m3_A_U9_A10NANNANT01.04 OP09
0762lac-m4_A_U9_A10NANNANT01.11 OP09
0772lac-m5_A_U9_A10NANNANT01.05 OP09
0782lac-m6_A_U9_A10NANNANT00.82 OP09
0792lac-m7_A_U9_A10NANNANT01.07 OP09
0802lac-m8_A_U9_A10NANNANT01.09 OP09
0812lac-m9_A_U9_A10NANNANT00.96 OP09
0822lac-m1_A_A10_A11AAAAA08280.52 AA08
0832lac-m2_A_A10_A11AAAAA08290.53 AA08
0842lac-m3_A_A10_A11AAAAA08250.54 AA08
0852lac-m4_A_A10_A11AAAAA08270.53 AA08
0862lac-m5_A_A10_A11AAAAA08260.54 AA08
0872lac-m6_A_A10_A11AAAAA08270.52 AA08
0882lac-m7_A_A10_A11AAAAA08270.53 AA08
0892lac-m8_A_A10_A11AAAAA08270.53 AA08
0902lac-m9_A_A10_A11AAAAA08300.53 AA08
0912lac-m1_A_A11_A12AAAAA08420.43 AA08
0922lac-m2_A_A11_A12AAAAA08220.53 AA08
0932lac-m3_A_A11_A12AAAAA08210.54 AA08
0942lac-m4_A_A11_A12AAAAA08520.39 AA08
0952lac-m5_A_A11_A12AAAAA08170.55 AA08
0962lac-m6_A_A11_A12AAAAA08310.48 AA08
0972lac-m7_A_A11_A12AAAAA08260.50 AA08
0982lac-m8_A_A11_A12AAAAA08400.43 AA08
0992lac-m9_A_A11_A12AAAAA08170.55 AA08
1002lac-m1_A_A12_U13AAAAA08520.35 AA08
1012lac-m2_A_A12_U13AAAAA08570.34 AA08
1022lac-m3_A_A12_U13AAAAA08650.34 AA08
1032lac-m4_A_A12_U13AAAAA08550.37 AA08
1042lac-m5_A_A12_U13AAAAA08570.33 AA08
1052lac-m6_A_A12_U13AAAAA08510.35 AA08
1062lac-m7_A_A12_U13AAAAA08540.35 AA08
1072lac-m8_A_A12_U13AAAAA08570.35 AA08
1082lac-m9_A_A12_U13AAAAA08530.34 AA08
1092lac-m1_A_U13_C14NANNANT00.53 AA04
1102lac-m2_A_U13_C14NANNANT00.52 AA04
1112lac-m3_A_U13_C14NANNANT00.47 AA04
1122lac-m4_A_U13_C14NANNANT00.51 AA04
1132lac-m5_A_U13_C14NANNANT00.53 AA04
1142lac-m6_A_U13_C14NANNANT00.55 AA04
1152lac-m7_A_U13_C14NANNANT00.51 AA04
1162lac-m8_A_U13_C14NANNANT00.50 AA04
1172lac-m9_A_U13_C14NANNANT00.51 AA04
1182lac-m1_A_C14_C15AAAAA08540.33 AA08
1192lac-m2_A_C14_C15AAAAA08540.33 AA08
1202lac-m3_A_C14_C15AAAAA08540.34 AA08
1212lac-m4_A_C14_C15AAAAA08610.32 AA08
1222lac-m5_A_C14_C15AAAAA08550.33 AA08
1232lac-m6_A_C14_C15AAAAA08520.33 AA08
1242lac-m7_A_C14_C15AAAAA08570.33 AA08
1252lac-m8_A_C14_C15AAAAA08570.33 AA08
1262lac-m9_A_C14_C15AAAAA08570.32 AA08
1272lac-m1_A_C15_C16AAAAA03520.34 AA03
1282lac-m2_A_C15_C16AAAAA03530.34 AA03
1292lac-m3_A_C15_C16AAAAA03510.31 AA03
1302lac-m4_A_C15_C16AAAAA03490.34 AA03
1312lac-m5_A_C15_C16AAAAA03490.34 AA03
1322lac-m6_A_C15_C16AAAAA03530.35 AA03
1332lac-m7_A_C15_C16AAAAA03530.33 AA03
1342lac-m8_A_C15_C16AAAAA03510.33 AA03
1352lac-m9_A_C15_C16AAAAA03500.34 AA03
1362lac-m1_A_C16_C17AAAAA08220.43 AA08
1372lac-m2_A_C16_C17AAAAA08220.43 AA08
1382lac-m3_A_C16_C17AAAAA08240.42 AA08
1392lac-m4_A_C16_C17AAAAA08240.42 AA08
1402lac-m5_A_C16_C17AAAAA08230.42 AA08
1412lac-m6_A_C16_C17AAAAA08220.42 AA08
1422lac-m7_A_C16_C17AAAAA08240.42 AA08
1432lac-m8_A_C16_C17AAAAA08230.42 AA08
1442lac-m9_A_C16_C17AAAAA08230.42 AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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