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Conformers: ABBIImiBZICOPNSYNN
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Quindoline/G-quadruplex complex

Results of the assignment of 210 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0012l7v-m10_A_DT4_DG5NANNANT00.91 BB08
0022l7v-m1_A_DT4_DG5NANNANT00.89 OP24
0032l7v-m2_A_DT4_DG5NANNANT00.91 BB11
0042l7v-m3_A_DT4_DG5NANNANT00.96 BB08
0052l7v-m4_A_DT4_DG5NANNANT01.07 BB08
0062l7v-m5_A_DT4_DG5NANNANT01.05 BB11
0072l7v-m6_A_DT4_DG5NANNANT00.91 BB11
0082l7v-m7_A_DT4_DG5NANNANT01.02 BB08
0092l7v-m8_A_DT4_DG5NANNANT00.85 BB08
0102l7v-m9_A_DT4_DG5NANNANT00.82 BB03
0112l7v-m10_A_DG5_DA6NANNANT00.87 BB07
0122l7v-m1_A_DG5_DA6NANNANT00.40 BB16
0132l7v-m2_A_DG5_DA6NANNANT00.42 BB16
0142l7v-m3_A_DG5_DA6NANNANT00.97 BB07
0152l7v-m4_A_DG5_DA6NANNANT01.06 BB07
0162l7v-m5_A_DG5_DA6NANNANT00.46 BB16
0172l7v-m6_A_DG5_DA6NANNANT00.88 BB00
0182l7v-m7_A_DG5_DA6NANNANT00.36 BB16
0192l7v-m8_A_DG5_DA6NANNANT00.35 BB16
0202l7v-m9_A_DG5_DA6NANNANT01.02 BB07
0212l7v-m10_A_DA6_DG7NANNANT01.30 BB04
0222l7v-m1_A_DA6_DG7NANNANT01.23 BB07
0232l7v-m2_A_DA6_DG7NANNANT01.34 BB07
0242l7v-m3_A_DA6_DG7NANNANT01.31 BB07
0252l7v-m4_A_DA6_DG7NANNANT01.39 BB07
0262l7v-m5_A_DA6_DG7NANNANT01.26 BB07
0272l7v-m6_A_DA6_DG7NANNANT01.28 BB07
0282l7v-m7_A_DA6_DG7NANNANT01.31 BB07
0292l7v-m8_A_DA6_DG7NANNANT00.51 OP22
0302l7v-m9_A_DA6_DG7NANNANT01.37 BB07
0312l7v-m10_A_DG7_DG8NANNANT00.37 BA08
0322l7v-m1_A_DG7_DG8NANNANT00.36 BA08
0332l7v-m2_A_DG7_DG8NANNANT00.38 BA08
0342l7v-m3_A_DG7_DG8B-ABA08640.31 BA08
0352l7v-m4_A_DG7_DG8B-ABA08610.36 BA08
0362l7v-m5_A_DG7_DG8B-ABA08360.44 BA08
0372l7v-m6_A_DG7_DG8B12BB04140.33 BB04
0382l7v-m7_A_DG7_DG8B-ABA08540.34 BA08
0392l7v-m8_A_DG7_DG8B12BB04180.35 BB04
0402l7v-m9_A_DG7_DG8B-ABA08660.33 BA08
0412l7v-m10_A_DG8_DG9BBBBB00250.28 BB00
0422l7v-m1_A_DG8_DG9BBBBB01370.26 BB01
0432l7v-m2_A_DG8_DG9BBBBB01300.27 BB01
0442l7v-m3_A_DG8_DG9A-BAB01230.40 AB01
0452l7v-m4_A_DG8_DG9BBBBB01310.29 BB01
0462l7v-m5_A_DG8_DG9BBBBB01160.27 BB01
0472l7v-m6_A_DG8_DG9BBBBB00410.29 BB00
0482l7v-m7_A_DG8_DG9BBBBB01310.30 BB01
0492l7v-m8_A_DG8_DG9BBBBB00350.29 BB00
0502l7v-m9_A_DG8_DG9BBBBB01180.27 BB01
0512l7v-m10_A_DG9_DT10NANNANT01.90 OP17
0522l7v-m1_A_DG9_DT10NANNANT02.15 OP06
0532l7v-m2_A_DG9_DT10NANNANT01.74 OP16
0542l7v-m3_A_DG9_DT10NANNANT02.22 OP06
0552l7v-m4_A_DG9_DT10NANNANT02.23 OP06
0562l7v-m5_A_DG9_DT10NANNANT01.76 OP16
0572l7v-m6_A_DG9_DT10NANNANT02.26 OP06
0582l7v-m7_A_DG9_DT10NANNANT02.22 OP06
0592l7v-m8_A_DG9_DT10NANNANT02.02 OP06
0602l7v-m9_A_DG9_DT10NANNANT01.68 OP16
0612l7v-m10_A_DT10_DG11NANNANT00.77 OP21
0622l7v-m1_A_DT10_DG11NANNANT00.55 OP21
0632l7v-m2_A_DT10_DG11NANNANT00.70 OP21
0642l7v-m3_A_DT10_DG11NANNANT00.55 OP21
0652l7v-m4_A_DT10_DG11NANNANT00.61 OP21
0662l7v-m5_A_DT10_DG11NANNANT00.70 OP21
0672l7v-m6_A_DT10_DG11OPNOP21200.57 OP21
0682l7v-m7_A_DT10_DG11NANNANT00.70 OP21
0692l7v-m8_A_DT10_DG11NANNANT00.58 OP21
0702l7v-m9_A_DT10_DG11NANNANT00.75 OP21
0712l7v-m10_A_DG11_DG12A-BAB03380.28 AB03
0722l7v-m1_A_DG11_DG12A-BAB01240.29 AB01
0732l7v-m2_A_DG11_DG12A-BAB03660.26 AB03
0742l7v-m3_A_DG11_DG12A-BAB03610.29 AB03
0752l7v-m4_A_DG11_DG12NANNANT00.47 AA02
0762l7v-m5_A_DG11_DG12A-BAB01330.37 AB01
0772l7v-m6_A_DG11_DG12BBwBB16770.51 BB16
0782l7v-m7_A_DG11_DG12NANNANT00.50 AA02
0792l7v-m8_A_DG11_DG12A-BAB01490.29 AB01
0802l7v-m9_A_DG11_DG12A-BAB01180.26 AB01
0812l7v-m10_A_DG12_DG13BB2BB08260.55 BB08
0822l7v-m1_A_DG12_DG13BBwBB11140.62 BB11
0832l7v-m2_A_DG12_DG13BB2BB08120.58 BB08
0842l7v-m3_A_DG12_DG13BBwBB11190.58 BB11
0852l7v-m4_A_DG12_DG13NANNANT00.59 AA01
0862l7v-m5_A_DG12_DG13NANNANT00.59 BA10
0872l7v-m6_A_DG12_DG13NANNANT00.50 BB08
0882l7v-m7_A_DG12_DG13NANNANT00.59 AA01
0892l7v-m8_A_DG12_DG13NANNANT00.62 BA10
0902l7v-m9_A_DG12_DG13NANNANT00.59 BA10
0912l7v-m10_A_DG13_DT14NANNANT01.07 OP21
0922l7v-m1_A_DG13_DT14NANNANT01.00 OP21
0932l7v-m2_A_DG13_DT14NANNANT01.07 OP21
0942l7v-m3_A_DG13_DT14NANNANT00.98 OP21
0952l7v-m4_A_DG13_DT14NANNANT01.03 OP21
0962l7v-m5_A_DG13_DT14NANNANT01.04 OP30
0972l7v-m6_A_DG13_DT14NANNANT01.01 OP21
0982l7v-m7_A_DG13_DT14NANNANT01.07 OP21
0992l7v-m8_A_DG13_DT14NANNANT01.09 OP30
1002l7v-m9_A_DG13_DT14NANNANT01.05 OP21
1012l7v-m10_A_DT14_DA15NANNANT00.69 OP01
1022l7v-m1_A_DT14_DA15NANNANT00.67 OP01
1032l7v-m2_A_DT14_DA15NANNANT00.73 OP01
1042l7v-m3_A_DT14_DA15NANNANT00.68 OP01
1052l7v-m4_A_DT14_DA15NANNANT00.68 OP01
1062l7v-m5_A_DT14_DA15NANNANT00.88 ZZ02
1072l7v-m6_A_DT14_DA15NANNANT00.66 OP01
1082l7v-m7_A_DT14_DA15NANNANT00.78 ZZ02
1092l7v-m8_A_DT14_DA15NANNANT00.67 OP01
1102l7v-m9_A_DT14_DA15NANNANT00.66 OP01
1112l7v-m10_A_DA15_DG16NANNANT01.40 OP18
1122l7v-m1_A_DA15_DG16NANNANT01.35 OP18
1132l7v-m2_A_DA15_DG16NANNANT01.31 OP18
1142l7v-m3_A_DA15_DG16NANNANT01.31 OP18
1152l7v-m4_A_DA15_DG16NANNANT01.32 OP18
1162l7v-m5_A_DA15_DG16NANNANT01.34 OP18
1172l7v-m6_A_DA15_DG16NANNANT01.35 OP18
1182l7v-m7_A_DA15_DG16NANNANT01.37 OP18
1192l7v-m8_A_DA15_DG16NANNANT01.40 OP18
1202l7v-m9_A_DA15_DG16NANNANT01.39 OP18
1212l7v-m10_A_DG16_DG17NANNANT00.48 BB16
1222l7v-m1_A_DG16_DG17NANNANT00.56 BB16
1232l7v-m2_A_DG16_DG17NANNANT00.51 BB16
1242l7v-m3_A_DG16_DG17NANNANT00.52 BB16
1252l7v-m4_A_DG16_DG17NANNANT00.53 BB16
1262l7v-m5_A_DG16_DG17NANNANT00.53 BB16
1272l7v-m6_A_DG16_DG17NANNANT00.57 BB16
1282l7v-m7_A_DG16_DG17NANNANT00.53 BB16
1292l7v-m8_A_DG16_DG17NANNANT00.51 BB16
1302l7v-m9_A_DG16_DG17NANNANT00.55 BB16
1312l7v-m10_A_DG17_DG18BBBBB01150.41 BB01
1322l7v-m1_A_DG17_DG18NANNANT00.56 AA02
1332l7v-m2_A_DG17_DG18BBBBB01170.32 BB01
1342l7v-m3_A_DG17_DG18NANNANT00.54 AA02
1352l7v-m4_A_DG17_DG18BBBBB0150.43 BB01
1362l7v-m5_A_DG17_DG18BBBBB01180.32 BB01
1372l7v-m6_A_DG17_DG18BBBBB01100.34 BB01
1382l7v-m7_A_DG17_DG18BBBBB01120.34 BB01
1392l7v-m8_A_DG17_DG18BBBBB01150.31 BB01
1402l7v-m9_A_DG17_DG18A-BAB01170.54 AB01
1412l7v-m10_A_DG18_DT19NANNANT00.78 OP21
1422l7v-m1_A_DG18_DT19NANNANT00.81 OP21
1432l7v-m2_A_DG18_DT19NANNANT00.77 OP21
1442l7v-m3_A_DG18_DT19NANNANT00.71 OP21
1452l7v-m4_A_DG18_DT19NANNANT00.70 OP21
1462l7v-m5_A_DG18_DT19NANNANT00.69 OP21
1472l7v-m6_A_DG18_DT19NANNANT00.64 OP21
1482l7v-m7_A_DG18_DT19NANNANT00.77 OP21
1492l7v-m8_A_DG18_DT19NANNANT00.62 OP21
1502l7v-m9_A_DG18_DT19NANNANT00.81 OP21
1512l7v-m10_A_DT19_DG20NANNANT00.55 OP21
1522l7v-m1_A_DT19_DG20NANNANT00.89 OP21
1532l7v-m2_A_DT19_DG20NANNANT00.75 OP21
1542l7v-m3_A_DT19_DG20NANNANT00.53 OP21
1552l7v-m4_A_DT19_DG20NANNANT00.55 OP21
1562l7v-m5_A_DT19_DG20NANNANT00.56 OP21
1572l7v-m6_A_DT19_DG20NANNANT00.62 OP21
1582l7v-m7_A_DT19_DG20NANNANT00.74 OP21
1592l7v-m8_A_DT19_DG20NANNANT00.41 OP21
1602l7v-m9_A_DT19_DG20NANNANT00.62 OP21
1612l7v-m10_A_DG20_DG21BBwBB16230.72 BB16
1622l7v-m1_A_DG20_DG21BBwBB16650.59 BB16
1632l7v-m2_A_DG20_DG21BBwBB16420.70 BB16
1642l7v-m3_A_DG20_DG21BBBBB00260.37 BB00
1652l7v-m4_A_DG20_DG21BBwBB16570.64 BB16
1662l7v-m5_A_DG20_DG21BBwBB16360.68 BB16
1672l7v-m6_A_DG20_DG21BBwBB16490.68 BB16
1682l7v-m7_A_DG20_DG21BBwBB16470.69 BB16
1692l7v-m8_A_DG20_DG21BBwBB16450.78 BB16
1702l7v-m9_A_DG20_DG21BBwBB16450.67 BB16
1712l7v-m10_A_DG21_DG22NANNANT00.52 AA01
1722l7v-m1_A_DG21_DG22NANNANT00.45 BA10
1732l7v-m2_A_DG21_DG22NANNANT00.57 BA10
1742l7v-m3_A_DG21_DG22B12BB05310.56 BB05
1752l7v-m4_A_DG21_DG22B12BB05280.44 BB05
1762l7v-m5_A_DG21_DG22BBwBB11210.30 BB11
1772l7v-m6_A_DG21_DG22NANNANT00.60 BA10
1782l7v-m7_A_DG21_DG22NANNANT00.45 BA10
1792l7v-m8_A_DG21_DG22NANNANT00.56 BA10
1802l7v-m9_A_DG21_DG22NANNANT00.49 BA10
1812l7v-m10_A_DG22_DT23NANNANT00.56 BA08
1822l7v-m1_A_DG22_DT23NANNANT00.78 AA02
1832l7v-m2_A_DG22_DT23NANNANT00.55 BA08
1842l7v-m3_A_DG22_DT23NANNANT00.58 AA12
1852l7v-m4_A_DG22_DT23NANNANT00.57 AA00
1862l7v-m5_A_DG22_DT23NANNANT00.75 AA02
1872l7v-m6_A_DG22_DT23NANNANT00.62 BA08
1882l7v-m7_A_DG22_DT23NANNANT00.51 AA12
1892l7v-m8_A_DG22_DT23NANNANT00.67 BA08
1902l7v-m9_A_DG22_DT23NANNANT00.58 BA08
1912l7v-m10_A_DT23_DA24NANNANT00.40 BB13
1922l7v-m1_A_DT23_DA24NANNANT00.42 AA01
1932l7v-m2_A_DT23_DA24NANNANT00.41 BB13
1942l7v-m3_A_DT23_DA24NANNANT00.54 AA01
1952l7v-m4_A_DT23_DA24NANNANT00.44 BB13
1962l7v-m5_A_DT23_DA24NANNANT00.39 AA01
1972l7v-m6_A_DT23_DA24NANNANT00.42 AA01
1982l7v-m7_A_DT23_DA24NANNANT00.46 AA01
1992l7v-m8_A_DT23_DA24NANNANT00.38 AA01
2002l7v-m9_A_DT23_DA24NANNANT00.50 AA01
2012l7v-m10_A_DA24_DA25OPNOP24560.34 OP24
2022l7v-m1_A_DA24_DA25OPNOP24130.55 OP24
2032l7v-m2_A_DA24_DA25OPNOP24570.34 OP24
2042l7v-m3_A_DA24_DA25NANNANT00.70 OP24
2052l7v-m4_A_DA24_DA25NANNANT00.39 OP24
2062l7v-m5_A_DA24_DA25NANNANT00.47 OP24
2072l7v-m6_A_DA24_DA25OPNOP24170.48 OP24
2082l7v-m7_A_DA24_DA25OPNOP24130.39 OP24
2092l7v-m8_A_DA24_DA25NANNANT00.43 OP24
2102l7v-m9_A_DA24_DA25NANNANT00.41 OP24

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

Browse conformers

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