DNATCO v4.1: results

Solution structure of the human mitochondrial tRNAMet ASL containing the 5-formylcytidine modification in position 34

Results of the assignment of 150 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2kry-m10_A_C2_G3	AAA	AA00	47	0.20	AA00
002	2kry-m1_A_C2_G3	AAA	AA08	68	0.31	AA08
003	2kry-m2_A_C2_G3	AAu	AA12	54	0.38	AA12
004	2kry-m3_A_C2_G3	AAA	AA00	47	0.19	AA00
005	2kry-m4_A_C2_G3	AAA	AA00	83	0.19	AA00
006	2kry-m5_A_C2_G3	AAA	AA08	87	0.25	AA08
007	2kry-m6_A_C2_G3	AAA	AA08	34	0.47	AA08
008	2kry-m7_A_C2_G3	AAA	AA08	38	0.47	AA08
009	2kry-m8_A_C2_G3	AAA	AA00	41	0.22	AA00
010	2kry-m9_A_C2_G3	AAA	AA00	42	0.24	AA00
011	2kry-m10_A_G3_G4	AAA	AA00	41	0.28	AA00
012	2kry-m1_A_G3_G4	AAA	AA00	71	0.25	AA00
013	2kry-m2_A_G3_G4	AAA	AA00	48	0.27	AA00
014	2kry-m3_A_G3_G4	AAA	AA00	45	0.28	AA00
015	2kry-m4_A_G3_G4	AAA	AA00	54	0.25	AA00
016	2kry-m5_A_G3_G4	AAA	AA00	43	0.33	AA00
017	2kry-m6_A_G3_G4	AAA	AA00	58	0.28	AA00
018	2kry-m7_A_G3_G4	AAA	AA00	47	0.28	AA00
019	2kry-m8_A_G3_G4	AAA	AA08	45	0.25	AA08
020	2kry-m9_A_G3_G4	AAA	AA00	55	0.27	AA00
021	2kry-m10_A_G4_G5	AAA	AA04	87	0.20	AA04
022	2kry-m1_A_G4_G5	AAA	AA08	64	0.27	AA08
023	2kry-m2_A_G4_G5	AAA	AA04	63	0.38	AA04
024	2kry-m3_A_G4_G5	AAA	AA00	25	0.40	AA00
025	2kry-m4_A_G4_G5	AAA	AA00	14	0.42	AA00
026	2kry-m5_A_G4_G5	AAA	AA00	59	0.20	AA00
027	2kry-m6_A_G4_G5	AAA	AA00	38	0.33	AA00
028	2kry-m7_A_G4_G5	AAA	AA08	54	0.30	AA08
029	2kry-m8_A_G4_G5	AAA	AA08	48	0.31	AA08
030	2kry-m9_A_G4_G5	AAA	AA00	77	0.19	AA00
031	2kry-m10_A_G5_C6	AAA	AA04	29	0.54	AA04
032	2kry-m1_A_G5_C6	AAA	AA00	12	0.46	AA00
033	2kry-m2_A_G5_C6	AAA	AA00	32	0.43	AA00
034	2kry-m3_A_G5_C6	AAA	AA00	78	0.28	AA00
035	2kry-m4_A_G5_C6	AAA	AA00	71	0.24	AA00
036	2kry-m5_A_G5_C6	AAA	AA00	55	0.34	AA00
037	2kry-m6_A_G5_C6	AAA	AA04	33	0.49	AA04
038	2kry-m7_A_G5_C6	AAA	AA00	15	0.42	AA00
039	2kry-m8_A_G5_C6	AAA	AA04	40	0.60	AA04
040	2kry-m9_A_G5_C6	AAA	AA00	51	0.36	AA00
041	2kry-m10_A_C6_C7	AAA	AA08	42	0.55	AA08
042	2kry-m1_A_C6_C7	AAA	AA04	22	0.67	AA04
043	2kry-m2_A_C6_C7	AAA	AA08	44	0.55	AA08
044	2kry-m3_A_C6_C7	AAA	AA04	16	0.72	AA04
045	2kry-m4_A_C6_C7	AAA	AA04	11	0.71	AA04
046	2kry-m5_A_C6_C7	AAA	AA08	25	0.65	AA08
047	2kry-m6_A_C6_C7	AAA	AA08	28	0.66	AA08
048	2kry-m7_A_C6_C7	AAA	AA08	11	0.64	AA08
049	2kry-m8_A_C6_C7	AAA	AA08	27	0.63	AA08
050	2kry-m9_A_C6_C7	NAN	NANT	0	0.73	AA04
051	2kry-m10_A_C7_RSQ8	NAN	NANT	0	0.87	OP04
052	2kry-m1_A_C7_RSQ8	NAN	NANT	0	0.66	OP04
053	2kry-m2_A_C7_RSQ8	NAN	NANT	0	0.70	OP04
054	2kry-m3_A_C7_RSQ8	NAN	NANT	0	0.76	OP14
055	2kry-m4_A_C7_RSQ8	NAN	NANT	0	0.90	OP04
056	2kry-m5_A_C7_RSQ8	NAN	NANT	0	0.95	OP05
057	2kry-m6_A_C7_RSQ8	NAN	NANT	0	0.49	OP04
058	2kry-m7_A_C7_RSQ8	NAN	NANT	0	0.82	OP04
059	2kry-m8_A_C7_RSQ8	NAN	NANT	0	0.85	OP04
060	2kry-m9_A_C7_RSQ8	NAN	NANT	0	0.85	OP04
061	2kry-m10_A_RSQ8_A9	NAN	NANT	0	0.50	AB04
062	2kry-m1_A_RSQ8_A9	NAN	NANT	0	0.67	AA04
063	2kry-m2_A_RSQ8_A9	NAN	NANT	0	0.69	AA04
064	2kry-m3_A_RSQ8_A9	NAN	NANT	0	0.59	AA00
065	2kry-m4_A_RSQ8_A9	NAN	NANT	0	0.41	AB04
066	2kry-m5_A_RSQ8_A9	NAN	NANT	0	0.82	AA04
067	2kry-m6_A_RSQ8_A9	NAN	NANT	0	0.65	AA00
068	2kry-m7_A_RSQ8_A9	NAN	NANT	0	0.40	AB04
069	2kry-m8_A_RSQ8_A9	NAN	NANT	0	0.41	AB04
070	2kry-m9_A_RSQ8_A9	NAN	NANT	0	0.73	AA04
071	2kry-m10_A_A9_U10	NAN	NANT	0	0.65	OP09
072	2kry-m1_A_A9_U10	NAN	NANT	0	0.72	OP09
073	2kry-m2_A_A9_U10	NAN	NANT	0	0.68	OP09
074	2kry-m3_A_A9_U10	NAN	NANT	0	0.69	OP04
075	2kry-m4_A_A9_U10	NAN	NANT	0	0.81	OP09
076	2kry-m5_A_A9_U10	NAN	NANT	0	0.70	OP09
077	2kry-m6_A_A9_U10	NAN	NANT	0	0.71	OP09
078	2kry-m7_A_A9_U10	NAN	NANT	0	0.81	OP09
079	2kry-m8_A_A9_U10	NAN	NANT	0	0.66	OP09
080	2kry-m9_A_A9_U10	NAN	NANT	0	0.77	OP09
081	2kry-m10_A_U10_A11	OPN	OP11	39	0.53	OP11
082	2kry-m1_A_U10_A11	NAN	NANT	0	0.70	OP11
083	2kry-m2_A_U10_A11	OPN	OP11	32	0.65	OP11
084	2kry-m3_A_U10_A11	OPN	OP11	37	0.58	OP11
085	2kry-m4_A_U10_A11	OPN	OP11	47	0.36	OP11
086	2kry-m5_A_U10_A11	OPN	OP11	21	0.78	OP11
087	2kry-m6_A_U10_A11	NAN	NANT	0	0.70	OP11
088	2kry-m7_A_U10_A11	NAN	NANT	0	0.52	OP11
089	2kry-m8_A_U10_A11	NAN	NANT	0	0.83	OP11
090	2kry-m9_A_U10_A11	OPN	OP11	44	0.48	OP11
091	2kry-m10_A_A11_C12	NAN	NANT	0	0.75	AA04
092	2kry-m1_A_A11_C12	AAA	AA04	25	0.65	AA04
093	2kry-m2_A_A11_C12	AAA	AA04	23	0.69	AA04
094	2kry-m3_A_A11_C12	AAA	AA04	26	0.67	AA04
095	2kry-m4_A_A11_C12	AAA	AA04	26	0.69	AA04
096	2kry-m5_A_A11_C12	AAA	AA00	7	0.64	AA00
097	2kry-m6_A_A11_C12	NAN	NANT	0	0.90	AA12
098	2kry-m7_A_A11_C12	AAA	AA04	23	0.70	AA04
099	2kry-m8_A_A11_C12	AAA	AA04	24	0.74	AA04
100	2kry-m9_A_A11_C12	AAA	AA04	25	0.67	AA04
101	2kry-m10_A_C12_C13	AAA	AA08	26	0.58	AA08
102	2kry-m1_A_C12_C13	AAA	AA08	11	0.57	AA08
103	2kry-m2_A_C12_C13	AAA	AA08	24	0.57	AA08
104	2kry-m3_A_C12_C13	AAA	AA04	29	0.57	AA04
105	2kry-m4_A_C12_C13	AAA	AA03	12	0.53	AA03
106	2kry-m5_A_C12_C13	AAA	AA04	38	0.53	AA04
107	2kry-m6_A_C12_C13	AAA	AA08	30	0.56	AA08
108	2kry-m7_A_C12_C13	AAA	AA00	15	0.41	AA00
109	2kry-m8_A_C12_C13	AAA	AA08	31	0.52	AA08
110	2kry-m9_A_C12_C13	AAA	AA04	28	0.57	AA04
111	2kry-m10_A_C13_C14	AAA	AA00	70	0.26	AA00
112	2kry-m1_A_C13_C14	AAA	AA08	75	0.29	AA08
113	2kry-m2_A_C13_C14	AAA	AA00	62	0.36	AA00
114	2kry-m3_A_C13_C14	AAA	AA00	64	0.23	AA00
115	2kry-m4_A_C13_C14	AAA	AA00	74	0.20	AA00
116	2kry-m5_A_C13_C14	AAA	AA00	54	0.33	AA00
117	2kry-m6_A_C13_C14	AAA	AA00	59	0.29	AA00
118	2kry-m7_A_C13_C14	AAA	AA08	89	0.20	AA08
119	2kry-m8_A_C13_C14	AAA	AA00	58	0.22	AA00
120	2kry-m9_A_C13_C14	AAA	AA00	68	0.17	AA00
121	2kry-m10_A_C14_C15	AAA	AA08	74	0.32	AA08
122	2kry-m1_A_C14_C15	AAA	AA08	74	0.29	AA08
123	2kry-m2_A_C14_C15	AAA	AA08	53	0.37	AA08
124	2kry-m3_A_C14_C15	AAA	AA08	65	0.35	AA08
125	2kry-m4_A_C14_C15	AAA	AA08	77	0.30	AA08
126	2kry-m5_A_C14_C15	AAA	AA08	81	0.24	AA08
127	2kry-m6_A_C14_C15	AAA	AA08	77	0.31	AA08
128	2kry-m7_A_C14_C15	AAA	AA08	84	0.22	AA08
129	2kry-m8_A_C14_C15	AAA	AA08	83	0.26	AA08
130	2kry-m9_A_C14_C15	AAA	AA08	81	0.30	AA08
131	2kry-m10_A_C15_G16	AAA	AA08	85	0.25	AA08
132	2kry-m1_A_C15_G16	AAA	AA08	85	0.22	AA08
133	2kry-m2_A_C15_G16	AAA	AA00	48	0.35	AA00
134	2kry-m3_A_C15_G16	AAA	AA08	87	0.26	AA08
135	2kry-m4_A_C15_G16	AAA	AA08	83	0.23	AA08
136	2kry-m5_A_C15_G16	AAA	AA08	52	0.47	AA08
137	2kry-m6_A_C15_G16	AAA	AA08	89	0.27	AA08
138	2kry-m7_A_C15_G16	AAA	AA08	86	0.24	AA08
139	2kry-m8_A_C15_G16	AAA	AA08	85	0.27	AA08
140	2kry-m9_A_C15_G16	AAA	AA08	87	0.25	AA08
141	2kry-m10_A_G16_A17	AAA	AA08	87	0.21	AA08
142	2kry-m1_A_G16_A17	AAA	AA08	81	0.26	AA08
143	2kry-m2_A_G16_A17	AAA	AA08	87	0.23	AA08
144	2kry-m3_A_G16_A17	AAA	AA08	86	0.20	AA08
145	2kry-m4_A_G16_A17	AAA	AA08	87	0.26	AA08
146	2kry-m5_A_G16_A17	AAu	AA12	67	0.25	AA12
147	2kry-m6_A_G16_A17	AAA	AA00	64	0.30	AA00
148	2kry-m7_A_G16_A17	AAA	AA08	88	0.21	AA08
149	2kry-m8_A_G16_A17	AAA	AA08	84	0.21	AA08
150	2kry-m9_A_G16_A17	AAA	AA08	80	0.24	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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N

Results of the assignment of 150 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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