DNATCO v4.1: results

Solution structure of the E coli tRNA-Arg1 (ACG) containing the 2-thiocytidine modification in position 32

Results of the assignment of 154 detected steps in 11 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2krw-m10_A_C1_U2	AAA	AA00	68	0.24	AA00
002	2krw-m11_A_C1_U2	AAA	AA00	64	0.17	AA00
003	2krw-m1_A_C1_U2	AAA	AA00	68	0.18	AA00
004	2krw-m2_A_C1_U2	AAA	AA00	50	0.24	AA00
005	2krw-m3_A_C1_U2	AAA	AA00	67	0.17	AA00
006	2krw-m4_A_C1_U2	AAA	AA00	57	0.23	AA00
007	2krw-m5_A_C1_U2	AAA	AA00	74	0.19	AA00
008	2krw-m6_A_C1_U2	AAA	AA00	55	0.28	AA00
009	2krw-m7_A_C1_U2	AAA	AA00	71	0.18	AA00
010	2krw-m8_A_C1_U2	AAA	AA00	77	0.18	AA00
011	2krw-m9_A_C1_U2	AAA	AA00	50	0.27	AA00
012	2krw-m10_A_U2_C3	AAA	AA00	38	0.33	AA00
013	2krw-m11_A_U2_C3	AAA	AA00	54	0.24	AA00
014	2krw-m1_A_U2_C3	AAA	AA00	49	0.29	AA00
015	2krw-m2_A_U2_C3	AAA	AA00	36	0.38	AA00
016	2krw-m3_A_U2_C3	AAA	AA00	51	0.26	AA00
017	2krw-m4_A_U2_C3	AAA	AA00	41	0.30	AA00
018	2krw-m5_A_U2_C3	AAA	AA00	51	0.27	AA00
019	2krw-m6_A_U2_C3	AAA	AA00	37	0.34	AA00
020	2krw-m7_A_U2_C3	AAA	AA00	49	0.27	AA00
021	2krw-m8_A_U2_C3	AAA	AA00	29	0.37	AA00
022	2krw-m9_A_U2_C3	AAA	AA00	52	0.21	AA00
023	2krw-m10_A_C3_G4	AAA	AA00	54	0.39	AA00
024	2krw-m11_A_C3_G4	AAA	AA00	65	0.21	AA00
025	2krw-m1_A_C3_G4	AAA	AA00	60	0.29	AA00
026	2krw-m2_A_C3_G4	AAA	AA00	66	0.26	AA00
027	2krw-m3_A_C3_G4	AAA	AA00	64	0.24	AA00
028	2krw-m4_A_C3_G4	AAA	AA00	74	0.21	AA00
029	2krw-m5_A_C3_G4	AAA	AA00	59	0.21	AA00
030	2krw-m6_A_C3_G4	AAA	AA00	55	0.38	AA00
031	2krw-m7_A_C3_G4	AAA	AA00	55	0.34	AA00
032	2krw-m8_A_C3_G4	AAA	AA00	65	0.31	AA00
033	2krw-m9_A_C3_G4	AAA	AA00	64	0.23	AA00
034	2krw-m10_A_G4_G5	AAA	AA00	55	0.28	AA00
035	2krw-m11_A_G4_G5	AAA	AA00	62	0.28	AA00
036	2krw-m1_A_G4_G5	AAA	AA00	46	0.36	AA00
037	2krw-m2_A_G4_G5	AAA	AA00	62	0.29	AA00
038	2krw-m3_A_G4_G5	AAA	AA00	53	0.28	AA00
039	2krw-m4_A_G4_G5	AAA	AA00	56	0.28	AA00
040	2krw-m5_A_G4_G5	AAA	AA00	58	0.27	AA00
041	2krw-m6_A_G4_G5	AAA	AA00	59	0.32	AA00
042	2krw-m7_A_G4_G5	AAA	AA00	61	0.29	AA00
043	2krw-m8_A_G4_G5	AAA	AA00	65	0.27	AA00
044	2krw-m9_A_G4_G5	AAA	AA00	52	0.31	AA00
045	2krw-m10_A_U7_A8	NAN	NANT	0	1.10	OP09
046	2krw-m11_A_U7_A8	NAN	NANT	0	1.22	OP09
047	2krw-m1_A_U7_A8	NAN	NANT	0	0.57	OP09
048	2krw-m2_A_U7_A8	NAN	NANT	0	0.53	OP09
049	2krw-m3_A_U7_A8	NAN	NANT	0	1.17	OP09
050	2krw-m4_A_U7_A8	NAN	NANT	0	1.20	OP09
051	2krw-m5_A_U7_A8	NAN	NANT	0	1.55	AB04
052	2krw-m6_A_U7_A8	NAN	NANT	0	0.95	OP09
053	2krw-m7_A_U7_A8	NAN	NANT	0	1.05	OP09
054	2krw-m8_A_U7_A8	NAN	NANT	0	1.19	OP09
055	2krw-m9_A_U7_A8	NAN	NANT	0	0.63	OP09
056	2krw-m10_A_A8_C9	NAN	NANT	0	0.86	OP20
057	2krw-m11_A_A8_C9	NAN	NANT	0	0.84	OP20
058	2krw-m1_A_A8_C9	NAN	NANT	0	0.46	OP20
059	2krw-m2_A_A8_C9	NAN	NANT	0	0.48	OP20
060	2krw-m3_A_A8_C9	NAN	NANT	0	0.82	OP20
061	2krw-m4_A_A8_C9	NAN	NANT	0	0.88	OP20
062	2krw-m5_A_A8_C9	NAN	NANT	0	0.83	OP20
063	2krw-m6_A_A8_C9	NAN	NANT	0	0.64	OP20
064	2krw-m7_A_A8_C9	NAN	NANT	0	0.75	OP20
065	2krw-m8_A_A8_C9	NAN	NANT	0	0.78	OP20
066	2krw-m9_A_A8_C9	OPN	OP20	27	0.53	OP20
067	2krw-m10_A_C9_G10	NAN	NANT	0	2.14	OP12
068	2krw-m11_A_C9_G10	NAN	NANT	0	2.13	OP12
069	2krw-m1_A_C9_G10	NAN	NANT	0	2.14	OP12
070	2krw-m2_A_C9_G10	NAN	NANT	0	2.15	OP12
071	2krw-m3_A_C9_G10	NAN	NANT	0	2.13	OP12
072	2krw-m4_A_C9_G10	NAN	NANT	0	2.13	OP12
073	2krw-m5_A_C9_G10	NAN	NANT	0	2.15	OP12
074	2krw-m6_A_C9_G10	NAN	NANT	0	2.14	OP12
075	2krw-m7_A_C9_G10	NAN	NANT	0	2.16	OP12
076	2krw-m8_A_C9_G10	NAN	NANT	0	2.13	OP12
077	2krw-m9_A_C9_G10	NAN	NANT	0	2.18	OP12
078	2krw-m10_A_G10_A11	NAN	NANT	0	0.69	AAS1
079	2krw-m11_A_G10_A11	NAN	NANT	0	0.83	AA04
080	2krw-m1_A_G10_A11	NAN	NANT	0	0.81	AB05
081	2krw-m2_A_G10_A11	NAN	NANT	0	0.99	AA04
082	2krw-m3_A_G10_A11	NAN	NANT	0	0.84	AAS1
083	2krw-m4_A_G10_A11	NAN	NANT	0	0.88	AAS1
084	2krw-m5_A_G10_A11	NAN	NANT	0	0.71	AAS1
085	2krw-m6_A_G10_A11	NAN	NANT	0	0.82	AAS1
086	2krw-m7_A_G10_A11	NAN	NANT	0	0.82	AB05
087	2krw-m8_A_G10_A11	NAN	NANT	0	0.76	AAS1
088	2krw-m9_A_G10_A11	NAN	NANT	0	0.83	AAS1
089	2krw-m10_A_A11_A12	NAN	NANT	0	0.98	OP24
090	2krw-m11_A_A11_A12	NAN	NANT	0	1.22	OP24
091	2krw-m1_A_A11_A12	NAN	NANT	0	1.39	OP24
092	2krw-m2_A_A11_A12	NAN	NANT	0	1.45	OP24
093	2krw-m3_A_A11_A12	NAN	NANT	0	1.17	OP24
094	2krw-m4_A_A11_A12	NAN	NANT	0	1.19	OP24
095	2krw-m5_A_A11_A12	NAN	NANT	0	1.11	OP24
096	2krw-m6_A_A11_A12	NAN	NANT	0	0.99	OP24
097	2krw-m7_A_A11_A12	NAN	NANT	0	1.15	OP24
098	2krw-m8_A_A11_A12	NAN	NANT	0	1.09	OP24
099	2krw-m9_A_A11_A12	NAN	NANT	0	1.11	OP24
100	2krw-m10_A_A12_C13	AAA	AA00	16	0.43	AA00
101	2krw-m11_A_A12_C13	AAA	AA08	65	0.30	AA08
102	2krw-m1_A_A12_C13	AAA	AA08	24	0.35	AA08
103	2krw-m2_A_A12_C13	AAA	AA00	63	0.27	AA00
104	2krw-m3_A_A12_C13	AAA	AA08	62	0.33	AA08
105	2krw-m4_A_A12_C13	AAA	AA08	68	0.25	AA08
106	2krw-m5_A_A12_C13	AAA	AA00	40	0.33	AA00
107	2krw-m6_A_A12_C13	AAA	AA00	20	0.36	AA00
108	2krw-m7_A_A12_C13	AAA	AA00	28	0.33	AA00
109	2krw-m8_A_A12_C13	AAA	AA00	16	0.38	AA00
110	2krw-m9_A_A12_C13	AAA	AA00	28	0.33	AA00
111	2krw-m10_A_C13_C14	AAA	AA00	63	0.28	AA00
112	2krw-m11_A_C13_C14	AAA	AA00	78	0.27	AA00
113	2krw-m1_A_C13_C14	AAA	AA00	76	0.23	AA00
114	2krw-m2_A_C13_C14	AAA	AA00	69	0.32	AA00
115	2krw-m3_A_C13_C14	AAA	AA00	72	0.33	AA00
116	2krw-m4_A_C13_C14	AAA	AA00	72	0.32	AA00
117	2krw-m5_A_C13_C14	AAA	AA00	78	0.29	AA00
118	2krw-m6_A_C13_C14	AAA	AA00	79	0.27	AA00
119	2krw-m7_A_C13_C14	AAA	AA00	67	0.31	AA00
120	2krw-m8_A_C13_C14	AAA	AA00	79	0.28	AA00
121	2krw-m9_A_C13_C14	AAA	AA00	83	0.23	AA00
122	2krw-m10_A_C14_G15	AAA	AA00	68	0.31	AA00
123	2krw-m11_A_C14_G15	AAA	AA00	43	0.28	AA00
124	2krw-m1_A_C14_G15	AAA	AA00	75	0.23	AA00
125	2krw-m2_A_C14_G15	AAA	AA00	45	0.30	AA00
126	2krw-m3_A_C14_G15	AAA	AA00	45	0.27	AA00
127	2krw-m4_A_C14_G15	AAA	AA00	44	0.30	AA00
128	2krw-m5_A_C14_G15	AAA	AA00	66	0.23	AA00
129	2krw-m6_A_C14_G15	AAA	AA00	51	0.38	AA00
130	2krw-m7_A_C14_G15	AAA	AA00	82	0.24	AA00
131	2krw-m8_A_C14_G15	AAA	AA00	83	0.26	AA00
132	2krw-m9_A_C14_G15	AAA	AA00	57	0.23	AA00
133	2krw-m10_A_G15_A16	AAA	AA00	40	0.32	AA00
134	2krw-m11_A_G15_A16	AAA	AA00	64	0.20	AA00
135	2krw-m1_A_G15_A16	AAA	AA00	79	0.21	AA00
136	2krw-m2_A_G15_A16	AAA	AA00	61	0.30	AA00
137	2krw-m3_A_G15_A16	AAA	AA00	66	0.23	AA00
138	2krw-m4_A_G15_A16	AAA	AA00	65	0.24	AA00
139	2krw-m5_A_G15_A16	AAA	AA00	64	0.25	AA00
140	2krw-m6_A_G15_A16	AAA	AA00	73	0.26	AA00
141	2krw-m7_A_G15_A16	AAA	AA00	72	0.20	AA00
142	2krw-m8_A_G15_A16	AAA	AA00	60	0.33	AA00
143	2krw-m9_A_G15_A16	AAA	AA00	64	0.20	AA00
144	2krw-m10_A_A16_G17	AAA	AA00	57	0.28	AA00
145	2krw-m11_A_A16_G17	AAA	AA00	66	0.25	AA00
146	2krw-m1_A_A16_G17	AAA	AA00	71	0.23	AA00
147	2krw-m2_A_A16_G17	AAA	AA00	50	0.30	AA00
148	2krw-m3_A_A16_G17	AAA	AA00	74	0.22	AA00
149	2krw-m4_A_A16_G17	AAA	AA00	84	0.19	AA00
150	2krw-m5_A_A16_G17	AAA	AA00	67	0.23	AA00
151	2krw-m6_A_A16_G17	AAA	AA00	74	0.23	AA00
152	2krw-m7_A_A16_G17	AAA	AA00	68	0.24	AA00
153	2krw-m8_A_A16_G17	AAA	AA00	61	0.27	AA00
154	2krw-m9_A_A16_G17	AAA	AA00	65	0.27	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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B-A

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IC

OPN

Z

N

Results of the assignment of 154 detected steps in 11 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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