DNATCO v4.1: results

NMR structure of the human tRNALys3 bound to the HIV genome Loop I

Results of the assignment of 200 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2k7e-m10_A_G1_C2	AAA	AA00	49	0.26	AA00
002	2k7e-m1_A_G1_C2	AAA	AA00	52	0.23	AA00
003	2k7e-m2_A_G1_C2	AAA	AA00	74	0.23	AA00
004	2k7e-m3_A_G1_C2	AAA	AA00	61	0.17	AA00
005	2k7e-m4_A_G1_C2	AAA	AA00	56	0.23	AA00
006	2k7e-m5_A_G1_C2	AAA	AA00	60	0.27	AA00
007	2k7e-m6_A_G1_C2	AAA	AA00	54	0.29	AA00
008	2k7e-m7_A_G1_C2	AAA	AA00	73	0.21	AA00
009	2k7e-m8_A_G1_C2	AAA	AA00	64	0.17	AA00
010	2k7e-m9_A_G1_C2	AAA	AA00	76	0.16	AA00
011	2k7e-m10_A_C2_G3	AAA	AA00	60	0.20	AA00
012	2k7e-m1_A_C2_G3	AAA	AA00	58	0.23	AA00
013	2k7e-m2_A_C2_G3	AAA	AA00	48	0.26	AA00
014	2k7e-m3_A_C2_G3	AAA	AA00	64	0.17	AA00
015	2k7e-m4_A_C2_G3	AAA	AA00	75	0.20	AA00
016	2k7e-m5_A_C2_G3	AAA	AA00	57	0.28	AA00
017	2k7e-m6_A_C2_G3	AAA	AA00	51	0.28	AA00
018	2k7e-m7_A_C2_G3	AAA	AA00	55	0.25	AA00
019	2k7e-m8_A_C2_G3	AAA	AA00	70	0.29	AA00
020	2k7e-m9_A_C2_G3	AAA	AA00	55	0.24	AA00
021	2k7e-m10_A_G3_G4	AAA	AA00	64	0.26	AA00
022	2k7e-m1_A_G3_G4	AAA	AA00	70	0.22	AA00
023	2k7e-m2_A_G3_G4	AAA	AA00	67	0.22	AA00
024	2k7e-m3_A_G3_G4	AAA	AA00	65	0.18	AA00
025	2k7e-m4_A_G3_G4	AAA	AA00	48	0.23	AA00
026	2k7e-m5_A_G3_G4	AAA	AA00	74	0.28	AA00
027	2k7e-m6_A_G3_G4	AAA	AA00	65	0.29	AA00
028	2k7e-m7_A_G3_G4	AAA	AA00	40	0.33	AA00
029	2k7e-m8_A_G3_G4	AAA	AA00	57	0.33	AA00
030	2k7e-m9_A_G3_G4	AAA	AA00	61	0.22	AA00
031	2k7e-m10_A_G4_U5	AAA	AA00	63	0.18	AA00
032	2k7e-m1_A_G4_U5	AAA	AA00	69	0.33	AA00
033	2k7e-m2_A_G4_U5	AAA	AA00	64	0.23	AA00
034	2k7e-m3_A_G4_U5	AAA	AA00	67	0.21	AA00
035	2k7e-m4_A_G4_U5	AAA	AA00	56	0.27	AA00
036	2k7e-m5_A_G4_U5	AAA	AA00	48	0.30	AA00
037	2k7e-m6_A_G4_U5	AAA	AA00	68	0.25	AA00
038	2k7e-m7_A_G4_U5	AAA	AA00	59	0.24	AA00
039	2k7e-m8_A_G4_U5	AAA	AA00	59	0.27	AA00
040	2k7e-m9_A_G4_U5	AAA	AA00	60	0.25	AA00
041	2k7e-m10_A_U5_G6	AAA	AA00	50	0.33	AA00
042	2k7e-m1_A_U5_G6	AAA	AA00	59	0.27	AA00
043	2k7e-m2_A_U5_G6	AAA	AA00	63	0.30	AA00
044	2k7e-m3_A_U5_G6	AAA	AA00	55	0.34	AA00
045	2k7e-m4_A_U5_G6	AAA	AA00	75	0.13	AA00
046	2k7e-m5_A_U5_G6	AAA	AA00	74	0.28	AA00
047	2k7e-m6_A_U5_G6	AAA	AA00	55	0.27	AA00
048	2k7e-m7_A_U5_G6	AAA	AA00	53	0.29	AA00
049	2k7e-m8_A_U5_G6	AAA	AA08	78	0.24	AA08
050	2k7e-m9_A_U5_G6	AAA	AA00	55	0.29	AA00
051	2k7e-m10_A_G6_U7	AAA	AA00	58	0.31	AA00
052	2k7e-m1_A_G6_U7	AAA	AA00	26	0.44	AA00
053	2k7e-m2_A_G6_U7	AAA	AA00	50	0.40	AA00
054	2k7e-m3_A_G6_U7	AAA	AA00	79	0.31	AA00
055	2k7e-m4_A_G6_U7	AAA	AA00	60	0.33	AA00
056	2k7e-m5_A_G6_U7	AAA	AA00	35	0.48	AA00
057	2k7e-m6_A_G6_U7	AAA	AA00	68	0.35	AA00
058	2k7e-m7_A_G6_U7	AAA	AA00	75	0.29	AA00
059	2k7e-m8_A_G6_U7	AAA	AA00	36	0.51	AA00
060	2k7e-m9_A_G6_U7	AAA	AA00	61	0.32	AA00
061	2k7e-m10_A_U7_A8	AAA	AA00	74	0.23	AA00
062	2k7e-m1_A_U7_A8	AAA	AA00	51	0.27	AA00
063	2k7e-m2_A_U7_A8	AAA	AA00	51	0.26	AA00
064	2k7e-m3_A_U7_A8	AAA	AA00	55	0.27	AA00
065	2k7e-m4_A_U7_A8	AAA	AA00	62	0.31	AA00
066	2k7e-m5_A_U7_A8	AAA	AA00	54	0.33	AA00
067	2k7e-m6_A_U7_A8	AAA	AA00	58	0.26	AA00
068	2k7e-m7_A_U7_A8	AAA	AA00	57	0.22	AA00
069	2k7e-m8_A_U7_A8	AAA	AA00	60	0.18	AA00
070	2k7e-m9_A_U7_A8	AAA	AA00	61	0.18	AA00
071	2k7e-m10_A_A8_A9	AAA	AA00	58	0.30	AA00
072	2k7e-m1_A_A8_A9	AAA	AA00	66	0.29	AA00
073	2k7e-m2_A_A8_A9	AAA	AA00	49	0.34	AA00
074	2k7e-m3_A_A8_A9	AAA	AA00	59	0.26	AA00
075	2k7e-m4_A_A8_A9	AAA	AA00	64	0.33	AA00
076	2k7e-m5_A_A8_A9	AAA	AA00	66	0.28	AA00
077	2k7e-m6_A_A8_A9	AAA	AA00	61	0.26	AA00
078	2k7e-m7_A_A8_A9	AAA	AA00	66	0.28	AA00
079	2k7e-m8_A_A8_A9	AAA	AA00	66	0.21	AA00
080	2k7e-m9_A_A8_A9	AAA	AA00	67	0.20	AA00
081	2k7e-m10_A_A9_A10	AAA	AA00	57	0.28	AA00
082	2k7e-m1_A_A9_A10	AAA	AA00	50	0.28	AA00
083	2k7e-m2_A_A9_A10	AAA	AA00	76	0.28	AA00
084	2k7e-m3_A_A9_A10	AAA	AA00	51	0.31	AA00
085	2k7e-m4_A_A9_A10	AAA	AA00	51	0.32	AA00
086	2k7e-m5_A_A9_A10	AAA	AA00	57	0.28	AA00
087	2k7e-m6_A_A9_A10	AAA	AA00	50	0.33	AA00
088	2k7e-m7_A_A9_A10	AAA	AA00	49	0.28	AA00
089	2k7e-m8_A_A9_A10	AAA	AA00	64	0.27	AA00
090	2k7e-m9_A_A9_A10	AAA	AA00	55	0.28	AA00
091	2k7e-m10_A_A10_A11	AAA	AA00	30	0.36	AA00
092	2k7e-m1_A_A10_A11	AAA	AA00	61	0.20	AA00
093	2k7e-m2_A_A10_A11	AAA	AA00	66	0.33	AA00
094	2k7e-m3_A_A10_A11	AAA	AA00	51	0.26	AA00
095	2k7e-m4_A_A10_A11	AAA	AA00	54	0.28	AA00
096	2k7e-m5_A_A10_A11	AAA	AA00	65	0.20	AA00
097	2k7e-m6_A_A10_A11	AAA	AA00	57	0.21	AA00
098	2k7e-m7_A_A10_A11	AAA	AA00	57	0.19	AA00
099	2k7e-m8_A_A10_A11	AAA	AA00	66	0.26	AA00
100	2k7e-m9_A_A10_A11	AAA	AA00	58	0.23	AA00
101	2k7e-m10_A_A11_G12	AAA	AA00	69	0.20	AA00
102	2k7e-m1_A_A11_G12	AAA	AA08	71	0.30	AA08
103	2k7e-m2_A_A11_G12	AAA	AA00	83	0.22	AA00
104	2k7e-m3_A_A11_G12	AAA	AA00	53	0.27	AA00
105	2k7e-m4_A_A11_G12	AAA	AA00	69	0.20	AA00
106	2k7e-m5_A_A11_G12	AAA	AA00	34	0.30	AA00
107	2k7e-m6_A_A11_G12	AAA	AA00	49	0.29	AA00
108	2k7e-m7_A_A11_G12	AAA	AA08	72	0.30	AA08
109	2k7e-m8_A_A11_G12	AAA	AA00	79	0.16	AA00
110	2k7e-m9_A_A11_G12	AAA	AA08	86	0.22	AA08
111	2k7e-m10_B_C1_U2	AAA	AA00	70	0.26	AA00
112	2k7e-m1_B_C1_U2	AAA	AA00	79	0.16	AA00
113	2k7e-m2_B_C1_U2	AAA	AA00	75	0.17	AA00
114	2k7e-m3_B_C1_U2	AAA	AA00	48	0.24	AA00
115	2k7e-m4_B_C1_U2	AAA	AA00	76	0.17	AA00
116	2k7e-m5_B_C1_U2	AAA	AA00	72	0.20	AA00
117	2k7e-m6_B_C1_U2	AAA	AA00	82	0.19	AA00
118	2k7e-m7_B_C1_U2	AAA	AA00	68	0.14	AA00
119	2k7e-m8_B_C1_U2	AAA	AA08	80	0.18	AA08
120	2k7e-m9_B_C1_U2	AAA	AA00	62	0.18	AA00
121	2k7e-m10_B_U2_SUR3	AAA	AA00	59	0.23	AA00
122	2k7e-m1_B_U2_SUR3	AAA	AA00	72	0.22	AA00
123	2k7e-m2_B_U2_SUR3	AAA	AA00	72	0.22	AA00
124	2k7e-m3_B_U2_SUR3	AAA	AA00	59	0.21	AA00
125	2k7e-m4_B_U2_SUR3	AAA	AA00	54	0.24	AA00
126	2k7e-m5_B_U2_SUR3	AAA	AA00	52	0.23	AA00
127	2k7e-m6_B_U2_SUR3	AAA	AA00	47	0.23	AA00
128	2k7e-m7_B_U2_SUR3	AAA	AA00	70	0.13	AA00
129	2k7e-m8_B_U2_SUR3	AAA	AA00	53	0.23	AA00
130	2k7e-m9_B_U2_SUR3	AAA	AA00	66	0.19	AA00
131	2k7e-m10_B_SUR3_U4	AAA	AA00	57	0.28	AA00
132	2k7e-m1_B_SUR3_U4	AAA	AA00	48	0.32	AA00
133	2k7e-m2_B_SUR3_U4	AAA	AA00	52	0.35	AA00
134	2k7e-m3_B_SUR3_U4	AAA	AA00	56	0.26	AA00
135	2k7e-m4_B_SUR3_U4	AAA	AA00	60	0.28	AA00
136	2k7e-m5_B_SUR3_U4	AAA	AA00	23	0.39	AA00
137	2k7e-m6_B_SUR3_U4	AAA	AA00	53	0.30	AA00
138	2k7e-m7_B_SUR3_U4	AAA	AA00	44	0.33	AA00
139	2k7e-m8_B_SUR3_U4	AAA	AA00	27	0.38	AA00
140	2k7e-m9_B_SUR3_U4	AAA	AA00	56	0.26	AA00
141	2k7e-m10_B_U4_U5	AAA	AA00	73	0.25	AA00
142	2k7e-m1_B_U4_U5	AAA	AA00	80	0.17	AA00
143	2k7e-m2_B_U4_U5	AAA	AA00	71	0.20	AA00
144	2k7e-m3_B_U4_U5	AAA	AA00	59	0.16	AA00
145	2k7e-m4_B_U4_U5	AAA	AA00	66	0.30	AA00
146	2k7e-m5_B_U4_U5	AAA	AA00	65	0.35	AA00
147	2k7e-m6_B_U4_U5	AAA	AA00	64	0.18	AA00
148	2k7e-m7_B_U4_U5	AAA	AA00	53	0.22	AA00
149	2k7e-m8_B_U4_U5	AAA	AA00	63	0.17	AA00
150	2k7e-m9_B_U4_U5	AAA	AA00	50	0.23	AA00
151	2k7e-m10_B_U5_A6	AAA	AA00	66	0.32	AA00
152	2k7e-m1_B_U5_A6	AAA	AA00	68	0.27	AA00
153	2k7e-m2_B_U5_A6	AAA	AA00	78	0.24	AA00
154	2k7e-m3_B_U5_A6	AAA	AA00	57	0.23	AA00
155	2k7e-m4_B_U5_A6	AAA	AA00	49	0.24	AA00
156	2k7e-m5_B_U5_A6	AAA	AA00	71	0.26	AA00
157	2k7e-m6_B_U5_A6	AAA	AA00	48	0.29	AA00
158	2k7e-m7_B_U5_A6	AAA	AA00	61	0.24	AA00
159	2k7e-m8_B_U5_A6	AAA	AA00	74	0.28	AA00
160	2k7e-m9_B_U5_A6	AAA	AA00	53	0.25	AA00
161	2k7e-m10_B_A6_A7	AAA	AA00	55	0.26	AA00
162	2k7e-m1_B_A6_A7	AAA	AA00	63	0.37	AA00
163	2k7e-m2_B_A6_A7	AAA	AA00	71	0.29	AA00
164	2k7e-m3_B_A6_A7	AAA	AA00	55	0.28	AA00
165	2k7e-m4_B_A6_A7	AAA	AA00	53	0.30	AA00
166	2k7e-m5_B_A6_A7	AAA	AA00	49	0.34	AA00
167	2k7e-m6_B_A6_A7	AAA	AA00	66	0.26	AA00
168	2k7e-m7_B_A6_A7	AAA	AA00	59	0.30	AA00
169	2k7e-m8_B_A6_A7	AAA	AA00	69	0.30	AA00
170	2k7e-m9_B_A6_A7	AAA	AA00	53	0.26	AA00
171	2k7e-m10_B_C9_U10	AAA	AA00	35	0.31	AA00
172	2k7e-m1_B_C9_U10	AAA	AA00	58	0.25	AA00
173	2k7e-m2_B_C9_U10	AAA	AA00	57	0.24	AA00
174	2k7e-m3_B_C9_U10	AAA	AA00	59	0.27	AA00
175	2k7e-m4_B_C9_U10	AAA	AA00	47	0.27	AA00
176	2k7e-m5_B_C9_U10	AAA	AA00	38	0.36	AA00
177	2k7e-m6_B_C9_U10	AAA	AA00	51	0.29	AA00
178	2k7e-m7_B_C9_U10	AAA	AA00	67	0.22	AA00
179	2k7e-m8_B_C9_U10	AAA	AA00	53	0.31	AA00
180	2k7e-m9_B_C9_U10	AAA	AA00	58	0.21	AA00
181	2k7e-m10_B_U10_G11	AAA	AA00	57	0.24	AA00
182	2k7e-m1_B_U10_G11	AAA	AA00	59	0.18	AA00
183	2k7e-m2_B_U10_G11	AAA	AA00	44	0.28	AA00
184	2k7e-m3_B_U10_G11	AAA	AA00	51	0.33	AA00
185	2k7e-m4_B_U10_G11	AAA	AA00	46	0.27	AA00
186	2k7e-m5_B_U10_G11	AAA	AA00	45	0.25	AA00
187	2k7e-m6_B_U10_G11	AAA	AA00	52	0.29	AA00
188	2k7e-m7_B_U10_G11	AAA	AA00	55	0.29	AA00
189	2k7e-m8_B_U10_G11	AAA	AA00	66	0.27	AA00
190	2k7e-m9_B_U10_G11	AAA	AA00	60	0.24	AA00
191	2k7e-m10_B_G11_C12	AAA	AA00	55	0.30	AA00
192	2k7e-m1_B_G11_C12	AAA	AA08	70	0.29	AA08
193	2k7e-m2_B_G11_C12	AAA	AA00	46	0.28	AA00
194	2k7e-m3_B_G11_C12	AAA	AA08	56	0.34	AA08
195	2k7e-m4_B_G11_C12	AAA	AA00	52	0.26	AA00
196	2k7e-m5_B_G11_C12	AAA	AA00	45	0.29	AA00
197	2k7e-m6_B_G11_C12	AAA	AA08	70	0.25	AA08
198	2k7e-m7_B_G11_C12	AAA	AA08	74	0.24	AA08
199	2k7e-m8_B_G11_C12	AAA	AA08	72	0.21	AA08
200	2k7e-m9_B_G11_C12	AAA	AA00	48	0.22	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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A-B

B-A

B

IC

OPN

Z

N

Results of the assignment of 200 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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