DNATCO v4.1: results

NMR solution structure of the exon/intron binding site 1 (EBS1/IBS1) of the group II intron Sc.ai5(gamma)

Results of the assignment of 240 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2k65-m10_A_G13_G14	AAA	AA00	26	0.30	AA00
002	2k65-m11_A_G13_G14	AAA	AA00	28	0.29	AA00
003	2k65-m12_A_G13_G14	AAA	AA00	30	0.29	AA00
004	2k65-m13_A_G13_G14	AAA	AA00	32	0.29	AA00
005	2k65-m14_A_G13_G14	AAA	AA00	27	0.30	AA00
006	2k65-m15_A_G13_G14	AAA	AA00	30	0.29	AA00
007	2k65-m16_A_G13_G14	AAA	AA00	28	0.29	AA00
008	2k65-m17_A_G13_G14	AAA	AA00	34	0.28	AA00
009	2k65-m18_A_G13_G14	AAA	AA00	28	0.29	AA00
010	2k65-m19_A_G13_G14	AAA	AA00	30	0.29	AA00
011	2k65-m1_A_G13_G14	AAA	AA00	28	0.29	AA00
012	2k65-m20_A_G13_G14	AAA	AA00	29	0.30	AA00
013	2k65-m2_A_G13_G14	AAA	AA00	31	0.29	AA00
014	2k65-m3_A_G13_G14	AAA	AA00	30	0.29	AA00
015	2k65-m4_A_G13_G14	AAA	AA00	28	0.29	AA00
016	2k65-m5_A_G13_G14	AAA	AA00	28	0.30	AA00
017	2k65-m6_A_G13_G14	AAA	AA00	31	0.29	AA00
018	2k65-m7_A_G13_G14	AAA	AA00	28	0.29	AA00
019	2k65-m8_A_G13_G14	AAA	AA00	31	0.29	AA00
020	2k65-m9_A_G13_G14	AAA	AA00	29	0.29	AA00
021	2k65-m10_A_G14_C15	AAA	AA00	26	0.36	AA00
022	2k65-m11_A_G14_C15	AAA	AA00	27	0.36	AA00
023	2k65-m12_A_G14_C15	AAA	AA00	28	0.35	AA00
024	2k65-m13_A_G14_C15	AAA	AA00	26	0.36	AA00
025	2k65-m14_A_G14_C15	AAA	AA00	25	0.36	AA00
026	2k65-m15_A_G14_C15	AAA	AA00	28	0.35	AA00
027	2k65-m16_A_G14_C15	AAA	AA00	27	0.35	AA00
028	2k65-m17_A_G14_C15	AAA	AA00	27	0.35	AA00
029	2k65-m18_A_G14_C15	AAA	AA00	26	0.35	AA00
030	2k65-m19_A_G14_C15	AAA	AA00	27	0.35	AA00
031	2k65-m1_A_G14_C15	AAA	AA00	29	0.34	AA00
032	2k65-m20_A_G14_C15	AAA	AA00	27	0.35	AA00
033	2k65-m2_A_G14_C15	AAA	AA00	26	0.36	AA00
034	2k65-m3_A_G14_C15	AAA	AA00	26	0.36	AA00
035	2k65-m4_A_G14_C15	AAA	AA00	28	0.36	AA00
036	2k65-m5_A_G14_C15	AAA	AA00	26	0.36	AA00
037	2k65-m6_A_G14_C15	AAA	AA00	28	0.35	AA00
038	2k65-m7_A_G14_C15	AAA	AA00	26	0.36	AA00
039	2k65-m8_A_G14_C15	AAA	AA00	25	0.36	AA00
040	2k65-m9_A_G14_C15	AAA	AA00	27	0.35	AA00
041	2k65-m10_A_C15_A16	AAA	AA00	87	0.26	AA00
042	2k65-m11_A_C15_A16	AAA	AA00	85	0.26	AA00
043	2k65-m12_A_C15_A16	AAA	AA00	87	0.25	AA00
044	2k65-m13_A_C15_A16	AAA	AA00	84	0.28	AA00
045	2k65-m14_A_C15_A16	AAA	AA00	84	0.26	AA00
046	2k65-m15_A_C15_A16	AAA	AA00	89	0.24	AA00
047	2k65-m16_A_C15_A16	AAA	AA00	87	0.25	AA00
048	2k65-m17_A_C15_A16	AAA	AA00	90	0.23	AA00
049	2k65-m18_A_C15_A16	AAA	AA00	82	0.31	AA00
050	2k65-m19_A_C15_A16	AAA	AA00	87	0.25	AA00
051	2k65-m1_A_C15_A16	AAA	AA00	87	0.25	AA00
052	2k65-m20_A_C15_A16	AAA	AA00	83	0.29	AA00
053	2k65-m2_A_C15_A16	AAA	AA00	84	0.29	AA00
054	2k65-m3_A_C15_A16	AAA	AA00	84	0.29	AA00
055	2k65-m4_A_C15_A16	AAA	AA00	90	0.23	AA00
056	2k65-m5_A_C15_A16	AAA	AA00	84	0.28	AA00
057	2k65-m6_A_C15_A16	AAA	AA00	89	0.24	AA00
058	2k65-m7_A_C15_A16	AAA	AA00	83	0.29	AA00
059	2k65-m8_A_C15_A16	AAA	AA00	85	0.28	AA00
060	2k65-m9_A_C15_A16	AAA	AA00	92	0.22	AA00
061	2k65-m10_A_A16_C17	AAA	AA00	85	0.32	AA00
062	2k65-m11_A_A16_C17	AAA	AA00	82	0.31	AA00
063	2k65-m12_A_A16_C17	AAA	AA00	81	0.31	AA00
064	2k65-m13_A_A16_C17	AAA	AA00	82	0.31	AA00
065	2k65-m14_A_A16_C17	AAA	AA00	82	0.32	AA00
066	2k65-m15_A_A16_C17	AAA	AA00	83	0.29	AA00
067	2k65-m16_A_A16_C17	AAA	AA00	82	0.30	AA00
068	2k65-m17_A_A16_C17	AAA	AA00	84	0.30	AA00
069	2k65-m18_A_A16_C17	AAA	AA00	83	0.31	AA00
070	2k65-m19_A_A16_C17	AAA	AA00	83	0.31	AA00
071	2k65-m1_A_A16_C17	AAA	AA00	83	0.30	AA00
072	2k65-m20_A_A16_C17	AAA	AA00	83	0.30	AA00
073	2k65-m2_A_A16_C17	AAA	AA00	83	0.31	AA00
074	2k65-m3_A_A16_C17	AAA	AA00	83	0.31	AA00
075	2k65-m4_A_A16_C17	AAA	AA00	82	0.31	AA00
076	2k65-m5_A_A16_C17	AAA	AA00	83	0.32	AA00
077	2k65-m6_A_A16_C17	AAA	AA00	83	0.31	AA00
078	2k65-m7_A_A16_C17	AAA	AA00	81	0.31	AA00
079	2k65-m8_A_A16_C17	AAA	AA00	82	0.29	AA00
080	2k65-m9_A_A16_C17	AAA	AA00	83	0.31	AA00
081	2k65-m10_A_C17_U18	NAN	NANT	0	0.47	AB04
082	2k65-m11_A_C17_U18	NAN	NANT	0	0.48	AB04
083	2k65-m12_A_C17_U18	NAN	NANT	0	0.48	AB04
084	2k65-m13_A_C17_U18	NAN	NANT	0	0.48	AB04
085	2k65-m14_A_C17_U18	NAN	NANT	0	0.48	AB04
086	2k65-m15_A_C17_U18	AAA	AA02	9	0.56	AA02
087	2k65-m16_A_C17_U18	NAN	NANT	0	0.56	AA02
088	2k65-m17_A_C17_U18	NAN	NANT	0	0.47	AB04
089	2k65-m18_A_C17_U18	NAN	NANT	0	0.56	AA02
090	2k65-m19_A_C17_U18	NAN	NANT	0	0.48	AB04
091	2k65-m1_A_C17_U18	NAN	NANT	0	0.56	AA02
092	2k65-m20_A_C17_U18	NAN	NANT	0	0.47	AB04
093	2k65-m2_A_C17_U18	NAN	NANT	0	0.47	AB04
094	2k65-m3_A_C17_U18	NAN	NANT	0	0.48	AB04
095	2k65-m4_A_C17_U18	NAN	NANT	0	0.48	AB04
096	2k65-m5_A_C17_U18	NAN	NANT	0	0.48	AB04
097	2k65-m6_A_C17_U18	NAN	NANT	0	0.48	AB04
098	2k65-m7_A_C17_U18	NAN	NANT	0	0.48	AB04
099	2k65-m8_A_C17_U18	AAA	AA02	10	0.55	AA02
100	2k65-m9_A_C17_U18	NAN	NANT	0	0.48	AB04
101	2k65-m10_A_U18_G19	AAA	AA00	19	0.35	AA00
102	2k65-m11_A_U18_G19	AAA	AA00	18	0.34	AA00
103	2k65-m12_A_U18_G19	AAA	AA00	18	0.35	AA00
104	2k65-m13_A_U18_G19	AAA	AA00	18	0.36	AA00
105	2k65-m14_A_U18_G19	AAA	AA00	17	0.34	AA00
106	2k65-m15_A_U18_G19	AAA	AA00	17	0.36	AA00
107	2k65-m16_A_U18_G19	AAA	AA00	17	0.36	AA00
108	2k65-m17_A_U18_G19	AAA	AA00	16	0.36	AA00
109	2k65-m18_A_U18_G19	AAA	AA00	19	0.36	AA00
110	2k65-m19_A_U18_G19	AAA	AA00	17	0.35	AA00
111	2k65-m1_A_U18_G19	AAA	AA00	18	0.36	AA00
112	2k65-m20_A_U18_G19	AAA	AA00	17	0.36	AA00
113	2k65-m2_A_U18_G19	AAA	AA00	17	0.35	AA00
114	2k65-m3_A_U18_G19	AAA	AA00	16	0.36	AA00
115	2k65-m4_A_U18_G19	AAA	AA00	17	0.35	AA00
116	2k65-m5_A_U18_G19	AAA	AA00	19	0.35	AA00
117	2k65-m6_A_U18_G19	AAA	AA00	19	0.35	AA00
118	2k65-m7_A_U18_G19	AAA	AA00	19	0.35	AA00
119	2k65-m8_A_U18_G19	AAA	AA00	17	0.36	AA00
120	2k65-m9_A_U18_G19	AAA	AA00	15	0.36	AA00
121	2k65-m10_B_C59_A60	AAA	AA00	58	0.32	AA00
122	2k65-m11_B_C59_A60	AAA	AA00	60	0.31	AA00
123	2k65-m12_B_C59_A60	AAA	AA00	60	0.30	AA00
124	2k65-m13_B_C59_A60	AAA	AA00	57	0.32	AA00
125	2k65-m14_B_C59_A60	AAA	AA00	52	0.33	AA00
126	2k65-m15_B_C59_A60	AAA	AA00	64	0.30	AA00
127	2k65-m16_B_C59_A60	AAA	AA00	58	0.31	AA00
128	2k65-m17_B_C59_A60	AAA	AA00	50	0.32	AA00
129	2k65-m18_B_C59_A60	AAA	AA00	54	0.31	AA00
130	2k65-m19_B_C59_A60	AAA	AA00	55	0.32	AA00
131	2k65-m1_B_C59_A60	AAA	AA00	61	0.30	AA00
132	2k65-m20_B_C59_A60	AAA	AA00	53	0.31	AA00
133	2k65-m2_B_C59_A60	AAA	AA00	57	0.31	AA00
134	2k65-m3_B_C59_A60	AAA	AA00	62	0.30	AA00
135	2k65-m4_B_C59_A60	AAA	AA00	61	0.31	AA00
136	2k65-m5_B_C59_A60	AAA	AA00	52	0.32	AA00
137	2k65-m6_B_C59_A60	AAA	AA00	64	0.31	AA00
138	2k65-m7_B_C59_A60	AAA	AA00	62	0.31	AA00
139	2k65-m8_B_C59_A60	AAA	AA00	61	0.30	AA00
140	2k65-m9_B_C59_A60	AAA	AA00	59	0.31	AA00
141	2k65-m10_B_A60_G61	AAA	AA00	68	0.18	AA00
142	2k65-m11_B_A60_G61	AAA	AA00	59	0.18	AA00
143	2k65-m12_B_A60_G61	AAA	AA00	65	0.18	AA00
144	2k65-m13_B_A60_G61	AAA	AA00	64	0.18	AA00
145	2k65-m14_B_A60_G61	AAA	AA00	65	0.18	AA00
146	2k65-m15_B_A60_G61	AAA	AA00	66	0.18	AA00
147	2k65-m16_B_A60_G61	AAA	AA00	66	0.18	AA00
148	2k65-m17_B_A60_G61	AAA	AA00	66	0.18	AA00
149	2k65-m18_B_A60_G61	AAA	AA00	66	0.18	AA00
150	2k65-m19_B_A60_G61	AAA	AA00	60	0.19	AA00
151	2k65-m1_B_A60_G61	AAA	AA00	69	0.18	AA00
152	2k65-m20_B_A60_G61	AAA	AA00	66	0.18	AA00
153	2k65-m2_B_A60_G61	AAA	AA00	68	0.18	AA00
154	2k65-m3_B_A60_G61	AAA	AA00	61	0.18	AA00
155	2k65-m4_B_A60_G61	AAA	AA00	61	0.18	AA00
156	2k65-m5_B_A60_G61	AAA	AA00	69	0.18	AA00
157	2k65-m6_B_A60_G61	AAA	AA00	68	0.18	AA00
158	2k65-m7_B_A60_G61	AAA	AA00	64	0.18	AA00
159	2k65-m8_B_A60_G61	AAA	AA00	67	0.18	AA00
160	2k65-m9_B_A60_G61	AAA	AA00	65	0.18	AA00
161	2k65-m10_B_G61_U62	AAA	AA00	62	0.31	AA00
162	2k65-m11_B_G61_U62	AAA	AA00	57	0.29	AA00
163	2k65-m12_B_G61_U62	AAA	AA00	59	0.30	AA00
164	2k65-m13_B_G61_U62	AAA	AA00	61	0.29	AA00
165	2k65-m14_B_G61_U62	AAA	AA00	58	0.30	AA00
166	2k65-m15_B_G61_U62	AAA	AA00	61	0.29	AA00
167	2k65-m16_B_G61_U62	AAA	AA00	61	0.29	AA00
168	2k65-m17_B_G61_U62	AAA	AA00	59	0.30	AA00
169	2k65-m18_B_G61_U62	AAA	AA00	61	0.31	AA00
170	2k65-m19_B_G61_U62	AAA	AA00	59	0.29	AA00
171	2k65-m1_B_G61_U62	AAA	AA00	61	0.30	AA00
172	2k65-m20_B_G61_U62	AAA	AA00	61	0.30	AA00
173	2k65-m2_B_G61_U62	AAA	AA00	61	0.30	AA00
174	2k65-m3_B_G61_U62	AAA	AA00	59	0.30	AA00
175	2k65-m4_B_G61_U62	AAA	AA00	58	0.29	AA00
176	2k65-m5_B_G61_U62	AAA	AA00	61	0.30	AA00
177	2k65-m6_B_G61_U62	AAA	AA00	62	0.29	AA00
178	2k65-m7_B_G61_U62	AAA	AA00	59	0.30	AA00
179	2k65-m8_B_G61_U62	AAA	AA00	61	0.30	AA00
180	2k65-m9_B_G61_U62	AAA	AA00	59	0.29	AA00
181	2k65-m10_B_U62_G63	AAA	AA00	74	0.27	AA00
182	2k65-m11_B_U62_G63	AAA	AA00	76	0.27	AA00
183	2k65-m12_B_U62_G63	AAA	AA00	72	0.27	AA00
184	2k65-m13_B_U62_G63	AAA	AA00	78	0.27	AA00
185	2k65-m14_B_U62_G63	AAA	AA00	77	0.27	AA00
186	2k65-m15_B_U62_G63	AAA	AA00	69	0.28	AA00
187	2k65-m16_B_U62_G63	AAA	AA00	71	0.27	AA00
188	2k65-m17_B_U62_G63	AAA	AA00	68	0.28	AA00
189	2k65-m18_B_U62_G63	AAA	AA00	80	0.28	AA00
190	2k65-m19_B_U62_G63	AAA	AA00	74	0.28	AA00
191	2k65-m1_B_U62_G63	AAA	AA00	69	0.28	AA00
192	2k65-m20_B_U62_G63	AAA	AA00	79	0.27	AA00
193	2k65-m2_B_U62_G63	AAA	AA00	77	0.27	AA00
194	2k65-m3_B_U62_G63	AAA	AA00	78	0.27	AA00
195	2k65-m4_B_U62_G63	AAA	AA00	66	0.28	AA00
196	2k65-m5_B_U62_G63	AAA	AA00	74	0.27	AA00
197	2k65-m6_B_U62_G63	AAA	AA00	69	0.27	AA00
198	2k65-m7_B_U62_G63	AAA	AA00	76	0.27	AA00
199	2k65-m8_B_U62_G63	AAA	AA00	74	0.27	AA00
200	2k65-m9_B_U62_G63	AAA	AA00	68	0.28	AA00
201	2k65-m10_B_G63_U64	AAA	AA00	51	0.20	AA00
202	2k65-m11_B_G63_U64	AAA	AA00	50	0.21	AA00
203	2k65-m12_B_G63_U64	AAA	AA00	51	0.20	AA00
204	2k65-m13_B_G63_U64	AAA	AA00	51	0.20	AA00
205	2k65-m14_B_G63_U64	AAA	AA00	50	0.20	AA00
206	2k65-m15_B_G63_U64	AAA	AA00	52	0.20	AA00
207	2k65-m16_B_G63_U64	AAA	AA00	51	0.19	AA00
208	2k65-m17_B_G63_U64	AAA	AA00	51	0.20	AA00
209	2k65-m18_B_G63_U64	AAA	AA00	48	0.23	AA00
210	2k65-m19_B_G63_U64	AAA	AA00	50	0.20	AA00
211	2k65-m1_B_G63_U64	AAA	AA00	50	0.22	AA00
212	2k65-m20_B_G63_U64	AAA	AA00	51	0.20	AA00
213	2k65-m2_B_G63_U64	AAA	AA00	50	0.20	AA00
214	2k65-m3_B_G63_U64	AAA	AA00	50	0.21	AA00
215	2k65-m4_B_G63_U64	AAA	AA00	51	0.20	AA00
216	2k65-m5_B_G63_U64	AAA	AA00	51	0.20	AA00
217	2k65-m6_B_G63_U64	AAA	AA00	51	0.19	AA00
218	2k65-m7_B_G63_U64	AAA	AA00	52	0.20	AA00
219	2k65-m8_B_G63_U64	AAA	AA00	50	0.19	AA00
220	2k65-m9_B_G63_U64	AAA	AA00	51	0.21	AA00
221	2k65-m10_B_U64_C65	AAA	AA00	55	0.25	AA00
222	2k65-m11_B_U64_C65	AAA	AA00	54	0.27	AA00
223	2k65-m12_B_U64_C65	AAA	AA00	55	0.26	AA00
224	2k65-m13_B_U64_C65	AAA	AA00	56	0.26	AA00
225	2k65-m14_B_U64_C65	AAA	AA00	56	0.26	AA00
226	2k65-m15_B_U64_C65	AAA	AA00	55	0.27	AA00
227	2k65-m16_B_U64_C65	AAA	AA00	56	0.25	AA00
228	2k65-m17_B_U64_C65	AAA	AA00	55	0.27	AA00
229	2k65-m18_B_U64_C65	AAA	AA00	50	0.27	AA00
230	2k65-m19_B_U64_C65	AAA	AA00	55	0.26	AA00
231	2k65-m1_B_U64_C65	AAA	AA00	58	0.27	AA00
232	2k65-m20_B_U64_C65	AAA	AA00	56	0.26	AA00
233	2k65-m2_B_U64_C65	AAA	AA00	70	0.26	AA00
234	2k65-m3_B_U64_C65	AAA	AA00	54	0.27	AA00
235	2k65-m4_B_U64_C65	AAA	AA00	57	0.26	AA00
236	2k65-m5_B_U64_C65	AAA	AA00	55	0.25	AA00
237	2k65-m6_B_U64_C65	AAA	AA00	56	0.26	AA00
238	2k65-m7_B_U64_C65	AAA	AA00	55	0.26	AA00
239	2k65-m8_B_U64_C65	AAA	AA00	56	0.25	AA00
240	2k65-m9_B_U64_C65	AAA	AA00	54	0.27	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

Results of the assignment of 240 detected steps in 20 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible