DNATCO v4.1: results

NMR structure of adenosine bulged RNA duplex with C:G-A triple

Results of the assignment of 150 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2k3z-m10_A_G1_U2	AAA	AA00	68	0.24	AA00
002	2k3z-m1_A_G1_U2	AAA	AA04	33	0.44	AA04
003	2k3z-m2_A_G1_U2	AAA	AA00	8	0.36	AA00
004	2k3z-m3_A_G1_U2	AAA	AA00	46	0.28	AA00
005	2k3z-m4_A_G1_U2	AAA	AA00	83	0.24	AA00
006	2k3z-m5_A_G1_U2	AAA	AA04	90	0.14	AA04
007	2k3z-m6_A_G1_U2	AAA	AA00	67	0.34	AA00
008	2k3z-m7_A_G1_U2	AAA	AA00	53	0.31	AA00
009	2k3z-m8_A_G1_U2	AAA	AA00	66	0.33	AA00
010	2k3z-m9_A_G1_U2	AAA	AA04	84	0.19	AA04
011	2k3z-m10_A_U2_C3	AAA	AA00	58	0.34	AA00
012	2k3z-m1_A_U2_C3	AAA	AA00	54	0.35	AA00
013	2k3z-m2_A_U2_C3	AAA	AA04	59	0.35	AA04
014	2k3z-m3_A_U2_C3	AAA	AA00	60	0.36	AA00
015	2k3z-m4_A_U2_C3	AAA	AA08	77	0.26	AA08
016	2k3z-m5_A_U2_C3	AAA	AA00	30	0.38	AA00
017	2k3z-m6_A_U2_C3	AAA	AA00	33	0.40	AA00
018	2k3z-m7_A_U2_C3	AAA	AA00	26	0.37	AA00
019	2k3z-m8_A_U2_C3	AAA	AA00	48	0.33	AA00
020	2k3z-m9_A_U2_C3	AAA	AA04	62	0.38	AA04
021	2k3z-m10_A_C3_G4	A-B	AB05	55	0.29	AB05
022	2k3z-m1_A_C3_G4	A-B	AB05	32	0.38	AB05
023	2k3z-m2_A_C3_G4	A-B	AB05	67	0.27	AB05
024	2k3z-m3_A_C3_G4	NAN	NANT	0	0.51	AB04
025	2k3z-m4_A_C3_G4	A-B	AB05	34	0.31	AB05
026	2k3z-m5_A_C3_G4	A-B	AB05	67	0.35	AB05
027	2k3z-m6_A_C3_G4	A-B	AB05	38	0.29	AB05
028	2k3z-m7_A_C3_G4	A-B	AB05	34	0.24	AB05
029	2k3z-m8_A_C3_G4	A-B	AB05	42	0.33	AB05
030	2k3z-m9_A_C3_G4	A-B	AB05	82	0.24	AB05
031	2k3z-m10_A_G4_A5	NAN	NANT	0	1.04	AA13
032	2k3z-m1_A_G4_A5	NAN	NANT	0	1.06	AA13
033	2k3z-m2_A_G4_A5	NAN	NANT	0	1.12	AA13
034	2k3z-m3_A_G4_A5	NAN	NANT	0	1.12	AA13
035	2k3z-m4_A_G4_A5	NAN	NANT	0	1.14	AA13
036	2k3z-m5_A_G4_A5	NAN	NANT	0	1.15	AA13
037	2k3z-m6_A_G4_A5	NAN	NANT	0	1.12	AA13
038	2k3z-m7_A_G4_A5	NAN	NANT	0	1.10	AA13
039	2k3z-m8_A_G4_A5	NAN	NANT	0	1.15	AA13
040	2k3z-m9_A_G4_A5	NAN	NANT	0	1.14	AA13
041	2k3z-m10_A_A5_G6	NAN	NANT	0	0.74	AA08
042	2k3z-m1_A_A5_G6	NAN	NANT	0	0.79	AA00
043	2k3z-m2_A_A5_G6	NAN	NANT	0	0.78	AA08
044	2k3z-m3_A_A5_G6	NAN	NANT	0	0.83	AA08
045	2k3z-m4_A_A5_G6	NAN	NANT	0	0.78	AA08
046	2k3z-m5_A_A5_G6	NAN	NANT	0	0.81	AA08
047	2k3z-m6_A_A5_G6	NAN	NANT	0	0.76	AA08
048	2k3z-m7_A_A5_G6	AAA	AA08	21	0.74	AA08
049	2k3z-m8_A_A5_G6	NAN	NANT	0	0.88	AA04
050	2k3z-m9_A_A5_G6	NAN	NANT	0	0.85	AA08
051	2k3z-m10_A_G6_C7	AAA	AA00	55	0.27	AA00
052	2k3z-m1_A_G6_C7	AAA	AA00	58	0.24	AA00
053	2k3z-m2_A_G6_C7	AAA	AA00	41	0.23	AA00
054	2k3z-m3_A_G6_C7	AAA	AA00	34	0.28	AA00
055	2k3z-m4_A_G6_C7	AAA	AA00	74	0.21	AA00
056	2k3z-m5_A_G6_C7	AAA	AA00	70	0.24	AA00
057	2k3z-m6_A_G6_C7	AAA	AA00	79	0.20	AA00
058	2k3z-m7_A_G6_C7	AAA	AA00	48	0.24	AA00
059	2k3z-m8_A_G6_C7	AAA	AA08	46	0.37	AA08
060	2k3z-m9_A_G6_C7	AAA	AA00	56	0.25	AA00
061	2k3z-m10_A_C7_U8	AAA	AA00	31	0.32	AA00
062	2k3z-m1_A_C7_U8	AAA	AA00	42	0.27	AA00
063	2k3z-m2_A_C7_U8	AAA	AA00	42	0.27	AA00
064	2k3z-m3_A_C7_U8	AAA	AA00	35	0.32	AA00
065	2k3z-m4_A_C7_U8	AAA	AA00	33	0.28	AA00
066	2k3z-m5_A_C7_U8	AAA	AA00	28	0.31	AA00
067	2k3z-m6_A_C7_U8	AAA	AA00	37	0.26	AA00
068	2k3z-m7_A_C7_U8	AAA	AA00	40	0.27	AA00
069	2k3z-m8_A_C7_U8	AAA	AA00	33	0.34	AA00
070	2k3z-m9_A_C7_U8	AAA	AA00	41	0.31	AA00
071	2k3z-m10_A_U8_G9	AAA	AA08	37	0.25	AA08
072	2k3z-m1_A_U8_G9	AAA	AA00	53	0.32	AA00
073	2k3z-m2_A_U8_G9	AAA	AA00	55	0.30	AA00
074	2k3z-m3_A_U8_G9	AAA	AA00	49	0.24	AA00
075	2k3z-m4_A_U8_G9	AAA	AA09	71	0.25	AA09
076	2k3z-m5_A_U8_G9	AAA	AA00	41	0.30	AA00
077	2k3z-m6_A_U8_G9	AAA	AA00	46	0.33	AA00
078	2k3z-m7_A_U8_G9	AAA	AA00	55	0.32	AA00
079	2k3z-m8_A_U8_G9	AAA	AA00	42	0.23	AA00
080	2k3z-m9_A_U8_G9	AAA	AA00	64	0.20	AA00
081	2k3z-m10_B_C10_A11	AAA	AA00	73	0.20	AA00
082	2k3z-m1_B_C10_A11	AAA	AA00	35	0.26	AA00
083	2k3z-m2_B_C10_A11	AAA	AA00	39	0.25	AA00
084	2k3z-m3_B_C10_A11	AAA	AA00	68	0.17	AA00
085	2k3z-m4_B_C10_A11	AAA	AA00	81	0.18	AA00
086	2k3z-m5_B_C10_A11	AAA	AA00	82	0.17	AA00
087	2k3z-m6_B_C10_A11	AAA	AA00	11	0.41	AA00
088	2k3z-m7_B_C10_A11	AAA	AA00	59	0.18	AA00
089	2k3z-m8_B_C10_A11	AAA	AA00	72	0.18	AA00
090	2k3z-m9_B_C10_A11	AAA	AA00	74	0.18	AA00
091	2k3z-m10_B_A11_G12	AAA	AA00	71	0.21	AA00
092	2k3z-m1_B_A11_G12	AAA	AA00	39	0.31	AA00
093	2k3z-m2_B_A11_G12	AAA	AA00	41	0.31	AA00
094	2k3z-m3_B_A11_G12	AAA	AA00	70	0.22	AA00
095	2k3z-m4_B_A11_G12	AAA	AA00	76	0.22	AA00
096	2k3z-m5_B_A11_G12	AAA	AA00	78	0.23	AA00
097	2k3z-m6_B_A11_G12	AAA	AA00	71	0.22	AA00
098	2k3z-m7_B_A11_G12	AAA	AA00	54	0.28	AA00
099	2k3z-m8_B_A11_G12	AAA	AA00	74	0.22	AA00
100	2k3z-m9_B_A11_G12	AAA	AA00	77	0.23	AA00
101	2k3z-m10_B_G12_C13	AAA	AA08	67	0.30	AA08
102	2k3z-m1_B_G12_C13	AAA	AA00	51	0.26	AA00
103	2k3z-m2_B_G12_C13	AAA	AA00	91	0.16	AA00
104	2k3z-m3_B_G12_C13	AAA	AA00	60	0.27	AA00
105	2k3z-m4_B_G12_C13	AAA	AA00	80	0.23	AA00
106	2k3z-m5_B_G12_C13	AAA	AA00	65	0.30	AA00
107	2k3z-m6_B_G12_C13	AAA	AA00	89	0.17	AA00
108	2k3z-m7_B_G12_C13	AAA	AA00	87	0.19	AA00
109	2k3z-m8_B_G12_C13	AAA	AA00	23	0.30	AA00
110	2k3z-m9_B_G12_C13	AAA	AA00	66	0.32	AA00
111	2k3z-m10_B_C13_C14	AAA	AA04	36	0.54	AA04
112	2k3z-m1_B_C13_C14	AAA	AA04	28	0.58	AA04
113	2k3z-m2_B_C13_C14	AAA	AA04	46	0.46	AA04
114	2k3z-m3_B_C13_C14	AAA	AA04	50	0.43	AA04
115	2k3z-m4_B_C13_C14	AAA	AA04	46	0.44	AA04
116	2k3z-m5_B_C13_C14	AAA	AA00	8	0.35	AA00
117	2k3z-m6_B_C13_C14	AAA	AA04	46	0.45	AA04
118	2k3z-m7_B_C13_C14	AAA	AA04	44	0.47	AA04
119	2k3z-m8_B_C13_C14	AAA	AA04	36	0.56	AA04
120	2k3z-m9_B_C13_C14	AAA	AA00	29	0.25	AA00
121	2k3z-m10_B_C14_G15	AAA	AA00	30	0.40	AA00
122	2k3z-m1_B_C14_G15	AAA	AA08	58	0.27	AA08
123	2k3z-m2_B_C14_G15	AAA	AA00	60	0.35	AA00
124	2k3z-m3_B_C14_G15	AAA	AA00	33	0.35	AA00
125	2k3z-m4_B_C14_G15	AAA	AA00	56	0.28	AA00
126	2k3z-m5_B_C14_G15	AAA	AA08	59	0.25	AA08
127	2k3z-m6_B_C14_G15	AAA	AA08	70	0.22	AA08
128	2k3z-m7_B_C14_G15	AAA	AA08	58	0.28	AA08
129	2k3z-m8_B_C14_G15	AAA	AA08	77	0.17	AA08
130	2k3z-m9_B_C14_G15	AAA	AA00	54	0.30	AA00
131	2k3z-m10_B_G15_A16	AAA	AA00	86	0.20	AA00
132	2k3z-m1_B_G15_A16	AAA	AA00	84	0.22	AA00
133	2k3z-m2_B_G15_A16	AAA	AA04	57	0.46	AA04
134	2k3z-m3_B_G15_A16	AAA	AA00	51	0.28	AA00
135	2k3z-m4_B_G15_A16	AAA	AA00	50	0.21	AA00
136	2k3z-m5_B_G15_A16	AAA	AA08	68	0.29	AA08
137	2k3z-m6_B_G15_A16	AAA	AA00	55	0.26	AA00
138	2k3z-m7_B_G15_A16	AAA	AA00	84	0.21	AA00
139	2k3z-m8_B_G15_A16	AAA	AA00	89	0.16	AA00
140	2k3z-m9_B_G15_A16	AAA	AA00	46	0.31	AA00
141	2k3z-m10_B_A16_C17	AAA	AA00	64	0.16	AA00
142	2k3z-m1_B_A16_C17	NAN	NANT	0	0.42	AA04
143	2k3z-m2_B_A16_C17	AAA	AA00	23	0.27	AA00
144	2k3z-m3_B_A16_C17	AAA	AA08	77	0.28	AA08
145	2k3z-m4_B_A16_C17	AAA	AA04	68	0.22	AA04
146	2k3z-m5_B_A16_C17	AAA	AA08	65	0.30	AA08
147	2k3z-m6_B_A16_C17	AAA	AA00	68	0.24	AA00
148	2k3z-m7_B_A16_C17	AAA	AA00	60	0.18	AA00
149	2k3z-m8_B_A16_C17	AAA	AA00	18	0.28	AA00
150	2k3z-m9_B_A16_C17	AAA	AA08	68	0.31	AA08

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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B-A

B

IC

OPN

Z

N

Results of the assignment of 150 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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