DNATCO v4.1: results

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Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2jlt_A_G1_G2	AAA	AA00	48	0.24	AA00
02	2jlt_A_G2_5BU3	AAA	AA00	25	0.31	AA00
03	2jlt_A_5BU3_C4	AAw	AA01	33	0.25	AA01
04	2jlt_A_C4_G5	AAA	AA00	51	0.28	AA00
05	2jlt_A_G5_G6	NAN	NANT	0	0.38	AA03
06	2jlt_A_G6_U7	NAN	NANT	0	0.45	OP05
07	2jlt_A_U7_C8	AAA	AA00	50	0.26	AA00
08	2jlt_A_C8_C9	AAA	AA00	32	0.28	AA00
09	2jlt_A_C9_C10	AAA	AA00	52	0.21	AA00
10	2jlt_A_C10_A11	AAA	AA00	50	0.22	AA00
11	2jlt_A_A11_G12	AAw	AA01	73	0.24	AA01
12	2jlt_A_G12_A13	AAA	AA04	60	0.22	AA04
13	2jlt_A_A13_C14	AAA	AA08	94	0.22	AA08
14	2jlt_A_C14_G15	AAA	AA00	83	0.17	AA00
15	2jlt_A_G15_A16	AAA	AA08	64	0.26	AA08
16	2jlt_A_A16_C17	AAA	AA08	91	0.15	AA08
17	2jlt_A_C17_C18	AAA	AA00	73	0.28	AA00
18	2jlt_B_G1_G2	AAA	AA00	74	0.14	AA00
19	2jlt_B_G2_A3	AAA	AA00	56	0.22	AA00
20	2jlt_B_A3_G4	AAA	AA00	70	0.26	AA00
21	2jlt_B_G4_C5	AAA	AA04	87	0.31	AA04
22	2jlt_B_C5_C6	NAN	NANT	0	1.35	OP06
23	2jlt_B_C6_U7	AAA	AA08	12	0.43	AA08
24	2jlt_B_U7_G8	AAA	AA00	58	0.28	AA00
25	2jlt_B_G8_G9	AAA	AA00	78	0.12	AA00
26	2jlt_B_G9_G10	AAA	AA00	56	0.19	AA00
27	2jlt_B_G10_A11	AAA	AA00	54	0.29	AA00
28	2jlt_B_A11_G12	AAA	AA00	85	0.22	AA00
29	2jlt_B_G12_C13	AAA	AA08	89	0.21	AA08
30	2jlt_B_C13_5BU14	AAA	AA00	61	0.27	AA00
31	2jlt_B_5BU14_C15	AAA	AA00	72	0.24	AA00
32	2jlt_B_C15_C16	AAA	AA00	79	0.24	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

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Color by NtC (balls)

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B-A

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IC

OPN

Z

N

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