DNATCO v4.1: results

PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS complexed with tRNA and a phenylalanyl-adenylate analog

Results of the assignment of 75 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2iy5_T_G1_C2	NAN	NANT	0	0.66	OP15
02	2iy5_T_C2_C3	AAA	AA00	52	0.33	AA00
03	2iy5_T_C3_G4	AAA	AA00	60	0.41	AA00
04	2iy5_T_G4_A5	AAA	AA00	89	0.22	AA00
05	2iy5_T_A5_G6	AAA	AA00	61	0.27	AA00
06	2iy5_T_G6_G7	AAA	AA00	53	0.42	AA00
07	2iy5_T_G7_U8	NAN	NANT	0	1.42	OP01
08	2iy5_T_U8_A9	NAN	NANT	0	0.54	IC07
09	2iy5_T_A9_G10	NAN	NANT	0	1.31	IC07
10	2iy5_T_G10_C11	NAN	NANT	0	1.38	ZZS1
11	2iy5_T_C11_U12	AAA	AA04	36	0.61	AA04
12	2iy5_T_U12_C13	AAA	AA00	78	0.39	AA00
13	2iy5_T_C13_A14	AAu	AA12	75	0.26	AA12
14	2iy5_T_A14_G15	AAw	AA05	75	0.26	AA05
15	2iy5_T_G15_U16	NAN	NANT	0	0.91	AA11
16	2iy5_T_U16_U17	NAN	NANT	0	2.48	OP16
17	2iy5_T_U17_G18	NAN	NANT	0	0.96	OP05
18	2iy5_T_G18_G19	NAN	NANT	0	0.65	AA06
19	2iy5_T_G19_U20	NAN	NANT	0	0.86	OP27
20	2iy5_T_U20_A21	NAN	NANT	0	1.51	AA05
21	2iy5_T_A21_G22	NAN	NANT	0	0.97	AA07
22	2iy5_T_G22_A23	AAA	AA08	35	0.44	AA08
23	2iy5_T_A23_G24	AAA	AA00	27	0.29	AA00
24	2iy5_T_G24_C25	NAN	NANT	0	0.81	IC04
25	2iy5_T_C25_A26	NAN	NANT	0	0.93	AA08
26	2iy5_T_A26_U27	AAA	AA00	67	0.38	AA00
27	2iy5_T_U27_G28	AAw	AA01	27	0.40	AA01
28	2iy5_T_G28_C29	NAN	NANT	0	0.89	IC04
29	2iy5_T_C29_G30	NAN	NANT	0	1.67	OP12
30	2iy5_T_G30_A31	NAN	NANT	0	1.11	AA08
31	2iy5_T_A31_C32	AAu	AA12	29	0.48	AA12
32	2iy5_T_C32_U33	NAN	NANT	0	0.79	AB04
33	2iy5_T_U33_G34	NAN	NANT	0	0.53	OP04
34	2iy5_T_G34_A35	NAN	NANT	0	0.63	AA04
35	2iy5_T_A35_A36	AAw	AA10	53	0.32	AA10
36	2iy5_T_A36_A37	AAA	AA00	61	0.38	AA00
37	2iy5_T_A37_A38	AAA	AA00	50	0.26	AA00
38	2iy5_T_A38_U39	NAN	NANT	0	0.54	AA05
39	2iy5_T_U39_C40	AAw	AA11	34	0.60	AA11
40	2iy5_T_C40_G41	NAN	NANT	0	1.17	AB2S
41	2iy5_T_G41_C42	NAN	NANT	0	0.86	BB16
42	2iy5_T_C42_A43	AAw	AA01	28	0.31	AA01
43	2iy5_T_A43_G44	NAN	NANT	0	0.84	AA09
44	2iy5_T_G44_U45	NAN	NANT	0	0.74	IC07
45	2iy5_T_U45_G46	NAN	NANT	0	1.13	IC03
46	2iy5_T_G46_U47	NAN	NANT	0	1.88	OP06
47	2iy5_T_U47_C48	NAN	NANT	0	0.92	OP13
48	2iy5_T_C48_C49	NAN	NANT	0	1.09	OP06
49	2iy5_T_C49_G50	AAA	AA08	25	0.41	AA08
50	2iy5_T_G50_C51	AAA	AA00	85	0.15	AA00
51	2iy5_T_C51_G52	AAw	AA01	43	0.53	AA01
52	2iy5_T_G52_G53	NAN	NANT	0	0.85	AA11
53	2iy5_T_G53_U54	AAA	AA08	46	0.48	AA08
54	2iy5_T_U54_U55	NAN	NANT	0	0.99	AA07
55	2iy5_T_U55_C56	NAN	NANT	0	0.63	OP03
56	2iy5_T_C56_G57	NAN	NANT	0	0.98	AA06
57	2iy5_T_G57_A58	NAN	NANT	0	1.41	OP31
58	2iy5_T_A58_U59	NAN	NANT	0	1.01	OP04
59	2iy5_T_U59_U60	NAN	NANT	0	0.67	AA03
60	2iy5_T_U60_C61	NAN	NANT	0	1.41	AA06
61	2iy5_T_C61_C62	NAN	NANT	0	1.38	AA08
62	2iy5_T_C62_G63	AAA	AA00	32	0.38	AA00
63	2iy5_T_G63_C64	AAA	AA00	69	0.29	AA00
64	2iy5_T_C64_G65	AAA	AA00	46	0.31	AA00
65	2iy5_T_G65_C66	AAw	AA01	57	0.29	AA01
66	2iy5_T_C66_C67	AAu	AA12	42	0.57	AA12
67	2iy5_T_C67_U68	NAN	NANT	0	0.59	AA04
68	2iy5_T_U68_C69	AAA	AA00	68	0.20	AA00
69	2iy5_T_C69_G70	AAA	AA00	52	0.33	AA00
70	2iy5_T_G70_G71	AAA	AA00	53	0.29	AA00
71	2iy5_T_G71_C72	AAA	AA00	64	0.49	AA00
72	2iy5_T_C72_A73	AAA	AA04	80	0.44	AA04
73	2iy5_T_A73_C74	NAN	NANT	0	1.01	AB2S
74	2iy5_T_C74_C75	NAN	NANT	0	1.53	OPS1
75	2iy5_T_C75_A76	NAN	NANT	0	0.55	IC07

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 75 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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