Conformers:
ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Escherichia Coli Replication Terminator Protein (Tus) Complexed With TerA DNA
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Results of the assignment of 28 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.
Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
| step number | Step name | CANA | NtC | confal | rmsd |
|---|---|---|---|---|---|
| 01 | 2i05_B_DT311_DA312 | NAN | NANT | 0 | 0.57 |
| 02 | 2i05_B_DA312_DG313 | BBB | BB00 | 25 | 0.35 |
| 03 | 2i05_B_DG313_DT314 | NAN | NANT | 0 | 0.71 |
| 04 | 2i05_B_DT314_DT315 | AAA | AA04 | 40 | 0.56 |
| 05 | 2i05_B_DT315_DA316 | NAN | NANT | 0 | 0.44 |
| 06 | 2i05_B_DA316_DC317 | B-A | BA05 | 38 | 0.21 |
| 07 | 2i05_B_DC317_DA318 | A-B | AB01 | 20 | 0.51 |
| 08 | 2i05_B_DA318_DA319 | miB | BB10 | 23 | 0.65 |
| 09 | 2i05_B_DA319_DC320 | NAN | NANT | 0 | 0.42 |
| 10 | 2i05_B_DC320_DA321 | AAA | AA00 | 63 | 0.37 |
| 11 | 2i05_B_DA321_DT322 | A-B | AB05 | 61 | 0.34 |
| 12 | 2i05_B_DT322_DA323 | B-A | BA01 | 8 | 0.36 |
| 13 | 2i05_B_DA323_DC324 | NAN | NANT | 0 | 0.57 |
| 14 | 2i05_B_DC324_DT325 | NAN | NANT | 0 | 0.45 |
| 15 | 2i05_C_DT327_DA328 | NAN | NANT | 0 | 1.38 |
| 16 | 2i05_C_DA328_DG329 | NAN | NANT | 0 | 0.69 |
| 17 | 2i05_C_DG329_DT330 | BBB | BB00 | 14 | 0.39 |
| 18 | 2i05_C_DT330_DA331 | BBB | BB00 | 34 | 0.26 |
| 19 | 2i05_C_DA331_DT332 | NAN | NANT | 0 | 0.40 |
| 20 | 2i05_C_DT332_DG333 | NAN | NANT | 0 | 0.61 |
| 21 | 2i05_C_DG333_DT334 | BBB | BB00 | 22 | 0.48 |
| 22 | 2i05_C_DT334_DT335 | BBw | BB02 | 15 | 0.28 |
| 23 | 2i05_C_DT335_DG336 | NAN | NANT | 0 | 0.40 |
| 24 | 2i05_C_DG336_DT337 | A-B | AB05 | 15 | 0.42 |
| 25 | 2i05_C_DT337_DA338 | BBB | BB00 | 14 | 0.43 |
| 26 | 2i05_C_DA338_DA339 | BB2 | BB07 | 63 | 0.42 |
| 27 | 2i05_C_DA339_DC340 | BBw | BB17 | 53 | 0.28 |
| 28 | 2i05_C_DC340_DT341 | B12 | BB04 | 32 | 0.47 |
Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
|
step: Table of conformers |
| δ1 | ε1 | ζ1 | α2 | β2 | γ2 | δ2 | χ1 | χ2 | μ | NN | CC | |
| step_torsions | ||||||||||||
| ntC_average | ||||||||||||
| Δ torsions | ||||||||||||
| torsion scores |
| comments | step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA |
Similarity of step to class averages
Download
Results as csv or json file.Best NtC fitted to input structure.
Restraints
Restraints file for REFMAC (steps with RMSD <= 0.5Å)Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]
Definitions
Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.Download the papers
Description of DNATCO server:Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).
Browse conformers
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