DNATCO v4.1: results

Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme

Results of the assignment of 137 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2ho6_A_G1_C2	NAN	NANT	0	0.87	OP27
002	2ho6_A_C2_G3	AAA	AA00	19	0.35	AA00
003	2ho6_A_G3_C4	AAA	AA00	88	0.18	AA00
004	2ho6_A_C4_C5	NAN	NANT	0	0.36	AA01
005	2ho6_A_G7_G8	AAA	AA00	47	0.37	AA00
006	2ho6_A_G8_A9	AAA	AA00	66	0.29	AA00
007	2ho6_A_A9_C10	AAA	AA08	94	0.10	AA08
008	2ho6_A_C10_U11	AAA	AA00	61	0.28	AA00
009	2ho6_A_U11_U12	AAA	AA00	94	0.13	AA00
010	2ho6_A_U12_A13	NAN	NANT	0	0.58	AB2S
011	2ho6_A_A13_A14	SYN	AAS1	72	0.20	AAS1
012	2ho6_A_A14_A15	AAA	AA00	88	0.11	AA00
013	2ho6_A_A15_G16	AAA	AA00	92	0.16	AA00
014	2ho6_A_G16_C17	AAA	AA00	96	0.12	AA00
015	2ho6_A_C17_C18	AAA	AA00	96	0.15	AA00
016	2ho6_A_C18_A19	AAA	AA00	91	0.12	AA00
017	2ho6_A_A19_U20	AAA	AA00	45	0.25	AA00
018	2ho6_B_G23_G24	AAA	AA00	75	0.12	AA00
019	2ho6_B_G24_C25	AAA	AA00	91	0.15	AA00
020	2ho6_B_C25_U26	AAA	AA00	85	0.16	AA00
021	2ho6_B_U26_U27	AAA	AA00	91	0.16	AA00
022	2ho6_B_U27_U28	AAA	AA00	87	0.15	AA00
023	2ho6_B_U28_A29	AAA	AA00	91	0.15	AA00
024	2ho6_B_A29_A30	AAA	AA00	90	0.15	AA00
025	2ho6_B_A30_G31	AAw	AA01	91	0.14	AA01
026	2ho6_B_G31_U32	AAA	AA00	68	0.21	AA00
027	2ho6_B_U32_U33	AAA	AA00	85	0.23	AA00
028	2ho6_B_U33_G34	AAA	AA00	25	0.42	AA00
029	2ho6_B_G34_A35	NAN	NANT	0	1.11	OP28
030	2ho6_B_A35_C36	NAN	NANT	0	0.52	OP26
031	2ho6_B_C36_G37	AAw	AA06	86	0.17	AA06
032	2ho6_B_G37_A38	AAA	AA00	54	0.20	AA00
033	2ho6_B_A38_G39	AAA	AA00	83	0.31	AA00
034	2ho6_B_G39_G40	AAA	AA00	86	0.15	AA00
035	2ho6_B_G40_G41	ICL	IC01	76	0.27	IC01
036	2ho6_B_G41_C42	NAN	NANT	0	0.60	OP13
037	2ho6_B_C42_A43	AAA	AA00	72	0.23	AA00
038	2ho6_B_A43_G44	AAA	AA00	65	0.17	AA00
039	2ho6_B_G44_G45	AAA	AA00	86	0.13	AA00
040	2ho6_B_G45_G46	AAA	AA00	93	0.18	AA00
041	2ho6_B_G46_U47	AAA	AA00	81	0.26	AA00
042	2ho6_B_U47_U48	A-B	AB01	20	0.31	AB01
043	2ho6_B_U48_U49	NAN	NANT	0	1.28	OP13
044	2ho6_B_U49_A50	NAN	NANT	0	0.59	OP13
045	2ho6_B_A50_U51	NAN	NANT	0	0.78	OP16
046	2ho6_B_U51_C52	AAA	AA00	88	0.19	AA00
047	2ho6_B_C52_G53	AAA	AA08	24	0.36	AA08
048	2ho6_B_G53_A54	AAA	AA00	29	0.33	AA00
049	2ho6_B_A54_G55	NAN	NANT	0	0.77	OP03
050	2ho6_B_G55_A56	NAN	NANT	0	0.82	OPS1
051	2ho6_B_A56_C57	NAN	NANT	0	0.49	AA09
052	2ho6_B_C57_A58	NAN	NANT	0	2.06	OP09
053	2ho6_B_A58_U59	NAN	NANT	0	0.79	OP21
054	2ho6_B_U59_C60	NAN	NANT	0	0.71	OP11
055	2ho6_B_C60_G61	AAA	AA00	42	0.39	AA00
056	2ho6_B_G61_G62	AAA	AA00	94	0.07	AA00
057	2ho6_B_G62_C63	AAA	AA00	94	0.09	AA00
058	2ho6_B_C63_G64	AAA	AA00	90	0.17	AA00
059	2ho6_B_G64_G65	AAA	AA00	75	0.24	AA00
060	2ho6_B_G65_G66	AAA	AA00	69	0.32	AA00
061	2ho6_B_G66_U67	NAN	NANT	0	0.27	OP09
062	2ho6_B_U67_G68	NAN	NANT	0	1.69	OP16
063	2ho6_B_G68_C69	AAA	AA00	82	0.20	AA00
064	2ho6_B_C69_C70	AAA	AA00	85	0.20	AA00
065	2ho6_B_C70_C71	AAA	AA00	94	0.13	AA00
066	2ho6_B_C71_U72	AAA	AA00	87	0.16	AA00
067	2ho6_B_U72_G73	AAA	AA00	91	0.11	AA00
068	2ho6_B_G73_C74	AAA	AA00	89	0.11	AA00
069	2ho6_B_C74_G75	AAA	AA00	91	0.17	AA00
070	2ho6_B_G75_G76	AAA	AA00	87	0.15	AA00
071	2ho6_B_G76_U77	AAA	AA00	91	0.09	AA00
072	2ho6_B_U77_C78	AAA	AA00	94	0.16	AA00
073	2ho6_B_C78_U79	NAN	NANT	0	1.13	OP05
074	2ho6_B_U79_U80	NAN	NANT	0	0.82	OP26
075	2ho6_B_U80_C81	AAA	AA00	90	0.12	AA00
076	2ho6_B_C81_C82	AAA	AA00	85	0.18	AA00
077	2ho6_B_C82_U83	AAA	AA00	93	0.14	AA00
078	2ho6_B_U83_G84	AAA	AA00	92	0.11	AA00
079	2ho6_B_G84_C85	AAA	AA00	93	0.13	AA00
080	2ho6_B_C85_G86	AAA	AA00	85	0.19	AA00
081	2ho6_B_G86_A87	AAA	AA00	91	0.09	AA00
082	2ho6_B_A87_C88	AAA	AA00	96	0.11	AA00
083	2ho6_B_C88_C89	AAw	AA01	82	0.19	AA01
084	2ho6_B_C89_G90	A-B	AB05	76	0.29	AB05
085	2ho6_B_G90_U91	NAN	NANT	0	0.60	OP22
086	2ho6_B_U91_U92	OPN	OP21	46	0.45	OP21
087	2ho6_B_U92_A93	OPN	OP11	44	0.40	OP11
088	2ho6_B_A93_G94	NAN	NANT	0	0.79	OP30
089	2ho6_B_G94_A95	B-A	BA08	45	0.61	BA08
090	2ho6_B_A95_G96	AAA	AA04	31	0.47	AA04
091	2ho6_B_G96_G97	AAA	AA00	88	0.15	AA00
092	2ho6_B_G97_A98	AAA	AA00	92	0.10	AA00
093	2ho6_B_A98_C99	AAA	AA00	82	0.15	AA00
094	2ho6_B_C99_U100	AAA	AA00	87	0.16	AA00
095	2ho6_B_U100_G101	AAA	AA00	58	0.40	AA00
096	2ho6_B_G101_G102	A-B	AB01	11	0.54	AB01
097	2ho6_B_A104_A105	AAw	AA01	61	0.42	AA01
098	2ho6_B_A105_A106	AAA	AA08	87	0.21	AA08
099	2ho6_B_A106_A107	AAA	AA08	27	0.57	AA08
100	2ho6_B_A107_C108	AAA	AA08	7	0.65	AA08
101	2ho6_B_C108_C109	AAA	AA00	89	0.10	AA00
102	2ho6_B_C109_A110	AAA	AA00	95	0.15	AA00
103	2ho6_B_A110_C111	AAA	AA00	90	0.14	AA00
104	2ho6_B_C111_A112	AAA	AA00	84	0.15	AA00
105	2ho6_B_A112_G113	AAA	AA00	72	0.23	AA00
106	2ho6_B_G113_G114	AAA	AA00	92	0.19	AA00
107	2ho6_B_G114_C115	OPN	OP03	82	0.33	OP03
108	2ho6_B_C115_G116	AAA	AA08	62	0.45	AA08
109	2ho6_B_G116_A117	AAA	AA09	72	0.23	AA09
110	2ho6_B_A117_C118	NAN	NANT	0	1.01	AA08
111	2ho6_B_C118_U119	AAA	AA00	89	0.21	AA00
112	2ho6_B_U119_G120	AAA	AA00	67	0.23	AA00
113	2ho6_B_G120_U121	AAA	AA00	75	0.15	AA00
114	2ho6_B_U121_G122	AAA	AA00	61	0.14	AA00
115	2ho6_B_G122_G123	AAA	AA00	88	0.14	AA00
116	2ho6_B_G123_C124	AAA	AA00	94	0.18	AA00
117	2ho6_B_C124_A125	AAu	AA12	80	0.25	AA12
118	2ho6_B_A125_U126	AAA	AA00	72	0.28	AA00
119	2ho6_B_U126_A127	NAN	NANT	0	0.60	IC04
120	2ho6_B_A127_G128	AAA	AA08	85	0.27	AA08
121	2ho6_B_G128_A129	AAA	AA00	82	0.19	AA00
122	2ho6_B_A129_G130	NAN	NANT	0	0.69	OP04
123	2ho6_B_G130_C131	OPN	OPS1	36	0.66	OPS1
124	2ho6_B_C131_A132	AAA	AA00	76	0.21	AA00
125	2ho6_B_A132_G133	AAA	AA00	95	0.12	AA00
126	2ho6_B_G133_U134	AAA	AA00	95	0.12	AA00
127	2ho6_B_U134_C135	AAA	AA00	76	0.19	AA00
128	2ho6_B_C135_C136	AAA	AA00	87	0.10	AA00
129	2ho6_B_C136_G137	AAA	AA00	31	0.44	AA00
130	2ho6_B_G137_G138	ICL	IC03	65	0.49	IC03
131	2ho6_B_G138_G139	NAN	NANT	0	1.79	OP12
132	2ho6_B_G139_C140	AAA	AA04	73	0.25	AA04
133	2ho6_B_C140_A141	AAA	AA00	72	0.18	AA00
134	2ho6_B_A141_G142	AAA	AA00	93	0.14	AA00
135	2ho6_B_G142_G143	AAA	AA00	74	0.29	AA00
136	2ho6_B_G143_A144	AAA	AA00	87	0.22	AA00
137	2ho6_B_A144_A23145	NAN	NANT	0	0.39	AB04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 137 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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