DNATCO v4.1: results

Crystal Structure of human DNA Polymerase lambda with a G/G mismatch in the primer terminus

Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2gws_T_DC1_DG2	NAN	NANT	0	0.39	AB03
02	2gws_T_DG2_DG3	BBB	BB00	81	0.14	BB00
03	2gws_T_DG3_DC4	B-A	BA05	66	0.17	BA05
04	2gws_T_DC4_DA5	NAN	NANT	0	1.35	OP21
05	2gws_T_DA5_DG6	NAN	NANT	0	0.57	AB2S
06	2gws_T_DG6_DC7	NAN	NANT	0	0.65	BBS1
07	2gws_T_DC7_DG8	A-B	AB01	72	0.12	AB01
08	2gws_T_DG8_DC9	B-A	BA01	15	0.23	BA01
09	2gws_T_DC9_DA10	A-B	AB01	50	0.24	AB01
10	2gws_T_DA10_DC11	BBB	BB00	59	0.25	BB00
11	2gws_P_DG1_DT2	BBB	BB00	60	0.29	BB00
12	2gws_P_DT2_DG3	BBB	BB00	79	0.13	BB00
13	2gws_P_DG3_DC4	B-A	BA05	79	0.15	BA05
14	2gws_P_DC4_DG5	A-B	AB01	68	0.26	AB01
15	2gws_P_DG5_DG6	BBB	BB00	71	0.24	BB00
16	2gws_D_DG1_DC2	A-B	AB04	57	0.26	AB04
17	2gws_D_DC2_DC3	BBB	BB01	70	0.13	BB01
18	2gws_D_DC3_DG4	BBB	BB00	33	0.32	BB00
19	2gws_F_DC1_DG2	B12	BB04	93	0.21	BB04
20	2gws_F_DG2_DG3	BBB	BB00	95	0.15	BB00
21	2gws_F_DG3_DC4	BBw	BB02	63	0.31	BB02
22	2gws_F_DC4_DA5	NAN	NANT	0	1.28	OP21
23	2gws_F_DA5_DG6	NAN	NANT	0	0.64	AB2S
24	2gws_F_DG6_DC7	NAN	NANT	0	0.61	BBS1
25	2gws_F_DC7_DG8	BBB	BB00	72	0.38	BB00
26	2gws_F_DG8_DC9	BBB	BB00	77	0.19	BB00
27	2gws_F_DC9_DA10	B12	BB04	87	0.26	BB04
28	2gws_F_DA10_DC11	BBB	BB00	94	0.17	BB00
29	2gws_G_DG1_DT2	BBB	BB00	73	0.22	BB00
30	2gws_G_DT2_DG3	BBB	BB00	92	0.13	BB00
31	2gws_G_DG3_DC4	BBw	BB02	94	0.13	BB02
32	2gws_G_DC4_DG5	BBB	BB00	95	0.19	BB00
33	2gws_G_DG5_DG6	BBB	BB00	79	0.26	BB00
34	2gws_H_DG1_DC2	BBB	BB00	76	0.30	BB00
35	2gws_H_DC2_DC3	BBB	BB00	91	0.12	BB00
36	2gws_H_DC3_DG4	BBB	BB00	69	0.39	BB00
37	2gws_J_DC1_DG2	B12	BB04	88	0.16	BB04
38	2gws_J_DG2_DG3	BBB	BB00	79	0.19	BB00
39	2gws_J_DG3_DC4	BBw	BB02	40	0.33	BB02
40	2gws_J_DC4_DA5	NAN	NANT	0	1.23	OP21
41	2gws_J_DA5_DG6	NAN	NANT	0	0.63	AB2S
42	2gws_J_DG6_DC7	SYN	BBS1	38	0.61	BBS1
43	2gws_J_DC7_DG8	BBB	BB00	71	0.39	BB00
44	2gws_J_DG8_DC9	BBB	BB00	74	0.19	BB00
45	2gws_J_DC9_DA10	BBB	BB00	64	0.39	BB00
46	2gws_J_DA10_DC11	BBw	BB02	82	0.12	BB02
47	2gws_K_DG1_DT2	BBB	BB00	75	0.24	BB00
48	2gws_K_DT2_DG3	BBB	BB00	95	0.11	BB00
49	2gws_K_DG3_DC4	BBw	BB02	90	0.10	BB02
50	2gws_K_DC4_DG5	BBB	BB00	92	0.25	BB00
51	2gws_K_DG5_DG6	BBB	BB00	71	0.29	BB00
52	2gws_L_DG1_DC2	BBB	BB00	57	0.33	BB00
53	2gws_L_DC2_DC3	BBB	BB00	92	0.11	BB00
54	2gws_L_DC3_DG4	BBB	BB00	62	0.29	BB00
55	2gws_N_DC1_DG2	B12	BB04	84	0.28	BB04
56	2gws_N_DG2_DG3	BBB	BB00	93	0.16	BB00
57	2gws_N_DG3_DC4	BBw	BB02	36	0.29	BB02
58	2gws_N_DC4_DA5	NAN	NANT	0	1.27	OP21
59	2gws_N_DA5_DG6	NAN	NANT	0	0.63	AB2S
60	2gws_N_DG6_DC7	SYN	BBS1	34	0.62	BBS1
61	2gws_N_DC7_DG8	BBB	BB00	67	0.43	BB00
62	2gws_N_DG8_DC9	BBB	BB00	60	0.25	BB00
63	2gws_N_DC9_DA10	BBB	BB00	65	0.40	BB00
64	2gws_N_DA10_DC11	BBB	BB00	89	0.21	BB00
65	2gws_R_DG1_DT2	BBB	BB00	74	0.24	BB00
66	2gws_R_DT2_DG3	BBB	BB00	97	0.10	BB00
67	2gws_R_DG3_DC4	BBw	BB02	71	0.11	BB02
68	2gws_R_DC4_DG5	BBB	BB00	96	0.22	BB00
69	2gws_R_DG5_DG6	BBB	BB00	78	0.23	BB00
70	2gws_Q_DG1_DC2	BBB	BB00	28	0.36	BB00
71	2gws_Q_DC2_DC3	BBB	BB00	92	0.10	BB00
72	2gws_Q_DC3_DG4	BBB	BB00	40	0.43	BB00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Results of the assignment of 72 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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