DNATCO v4.1: results

RNA Recognition and Cleavage by an Splicing Endonuclease

Results of the assignment of 69 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2gjw_E_G3_C4	NAN	NANT	0	0.75	AA01
02	2gjw_E_C4_G5	NAN	NANT	0	0.49	AA06
03	2gjw_E_G5_A6	AAA	AA00	24	0.37	AA00
04	2gjw_E_A6_C7	AAA	AA00	78	0.17	AA00
05	2gjw_E_C7_C8	AAA	AA00	79	0.17	AA00
06	2gjw_E_C8_G9	AAA	AA00	74	0.28	AA00
07	2gjw_E_G9_A10	AAA	AA00	76	0.13	AA00
08	2gjw_E_A10_C11	AAA	AA00	86	0.19	AA00
09	2gjw_E_C11_C12	AAA	AA08	77	0.15	AA08
10	2gjw_E_C12_A13	NAN	NANT	0	0.95	OP09
11	2gjw_E_A13_DU14	NAN	NANT	0	1.11	OP14
12	2gjw_E_DU14_A15	NAN	NANT	0	1.67	OP23
13	2gjw_E_A15_G16	OPN	OP24	85	0.35	OP24
14	2gjw_E_G16_C17	AAA	AA00	82	0.12	AA00
15	2gjw_E_C17_U18	AAw	AA06	66	0.19	AA06
16	2gjw_E_U18_G19	NAN	NANT	0	0.48	AA03
17	2gjw_E_G19_C20	NAN	NANT	0	1.07	IC03
18	2gjw_F_U3_G4	NAN	NANT	0	0.89	IC03
19	2gjw_F_G4_C5	NAN	NANT	0	0.43	AA06
20	2gjw_F_C5_A6	NAN	NANT	0	0.71	AA04
21	2gjw_F_A6_G7	AAA	AA08	59	0.40	AA08
22	2gjw_F_G7_C8	AAA	AA08	24	0.29	AA08
23	2gjw_F_C8_G9	AAA	AA08	85	0.20	AA08
24	2gjw_F_G9_G10	AAA	AA00	79	0.17	AA00
25	2gjw_F_G10_U11	AAA	AA00	59	0.14	AA00
26	2gjw_F_U11_C12	AAA	AA00	85	0.15	AA00
27	2gjw_F_C12_A13	NAN	NANT	0	0.81	OP09
28	2gjw_F_A13_A2314	NAN	NANT	0	1.26	OP17
29	2gjw_H_A15_G16	OPN	OP24	78	0.35	OP24
30	2gjw_H_G16_G17	AAA	AA08	62	0.21	AA08
31	2gjw_H_G17_U18	NAN	NANT	0	0.45	AA06
32	2gjw_H_U18_C19	AAw	AA06	24	0.41	AA06
33	2gjw_H_C19_G20	NAN	NANT	0	0.64	AA04
34	2gjw_H_G20_C21	NAN	NANT	0	0.75	AA03
35	2gjw_I_G3_C4	NAN	NANT	0	0.73	AA10
36	2gjw_I_C4_G5	NAN	NANT	0	0.49	AA06
37	2gjw_I_G5_A6	AAA	AA00	19	0.38	AA00
38	2gjw_I_A6_C7	AAA	AA00	79	0.18	AA00
39	2gjw_I_C7_C8	AAA	AA00	67	0.17	AA00
40	2gjw_I_C8_G9	AAA	AA00	70	0.29	AA00
41	2gjw_I_G9_A10	AAA	AA00	75	0.14	AA00
42	2gjw_I_A10_C11	AAA	AA00	89	0.18	AA00
43	2gjw_I_C11_C12	AAA	AA08	78	0.14	AA08
44	2gjw_I_C12_A13	NAN	NANT	0	0.95	OP09
45	2gjw_I_A13_DU14	NAN	NANT	0	1.11	OP14
46	2gjw_I_DU14_A15	NAN	NANT	0	1.66	OP23
47	2gjw_I_A15_G16	OPN	OP24	77	0.35	OP24
48	2gjw_I_G16_C17	AAA	AA00	83	0.12	AA00
49	2gjw_I_C17_U18	AAw	AA06	64	0.19	AA06
50	2gjw_I_U18_G19	NAN	NANT	0	0.38	AA11
51	2gjw_I_G19_C20	NAN	NANT	0	1.05	IC03
52	2gjw_I_C20_A21	NAN	NANT	0	0.82	AA10
53	2gjw_J_U3_G4	NAN	NANT	0	0.56	AB04
54	2gjw_J_G4_C5	NAN	NANT	0	0.41	AA06
55	2gjw_J_C5_A6	NAN	NANT	0	0.72	AA04
56	2gjw_J_A6_G7	AAA	AA08	57	0.41	AA08
57	2gjw_J_G7_C8	AAA	AA08	33	0.29	AA08
58	2gjw_J_C8_G9	AAA	AA08	85	0.19	AA08
59	2gjw_J_G9_G10	AAA	AA00	67	0.17	AA00
60	2gjw_J_G10_U11	AAA	AA00	77	0.12	AA00
61	2gjw_J_U11_C12	AAA	AA00	81	0.15	AA00
62	2gjw_J_C12_A13	NAN	NANT	0	0.83	OP09
63	2gjw_J_A13_A2314	NAN	NANT	0	1.33	OP17
64	2gjw_L_A15_G16	OPN	OP24	72	0.34	OP24
65	2gjw_L_G16_G17	AAA	AA03	77	0.19	AA03
66	2gjw_L_G17_U18	AAw	AA06	13	0.44	AA06
67	2gjw_L_U18_C19	AAw	AA06	49	0.42	AA06
68	2gjw_L_C19_G20	NAN	NANT	0	0.63	AA04
69	2gjw_L_G20_C21	NAN	NANT	0	0.43	AA11

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 69 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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