DNATCO v4.1: results

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2g5k_A_U2_G3	NAN	NANT	0	1.24	OP16
02	2g5k_A_G3_C4	AAA	AA08	39	0.27	AA08
03	2g5k_A_C4_G5	AAA	AA00	89	0.14	AA00
04	2g5k_A_G5_U6	AAA	AA00	80	0.36	AA00
05	2g5k_A_U6_C7	AAw	AA11	80	0.22	AA11
06	2g5k_A_C7_G8	AAA	AA00	56	0.36	AA00
07	2g5k_A_G8_C9	AAA	AA00	96	0.14	AA00
08	2g5k_A_C9_U10	AAA	AA00	73	0.24	AA00
09	2g5k_A_U10_C11	AAA	AA00	93	0.18	AA00
10	2g5k_A_C11_C12	AAA	AA00	78	0.23	AA00
11	2g5k_A_C12_G13	AAA	AA00	78	0.10	AA00
12	2g5k_A_G13_G14	AAA	AA00	83	0.23	AA00
13	2g5k_A_G14_A15	AAA	AA00	85	0.24	AA00
14	2g5k_A_A15_A16	NAN	NANT	0	0.68	OP04
15	2g5k_A_A16_A17	NAN	NANT	0	1.50	OP16
16	2g5k_A_A17_A18	NAN	NANT	0	0.35	OP06
17	2g5k_A_A18_G19	NAN	NANT	0	1.15	OP12
18	2g5k_A_G19_U20	NAN	NANT	0	0.64	AA12
19	2g5k_A_U20_C21	AAA	AA00	88	0.23	AA00
20	2g5k_A_C21_G22	AAA	AA00	83	0.21	AA00
21	2g5k_A_G22_C23	AAA	AA00	87	0.23	AA00
22	2g5k_B_U25_G26	NAN	NANT	0	1.24	OP16
23	2g5k_B_G26_C27	AAA	AA08	39	0.27	AA08
24	2g5k_B_C27_G28	AAA	AA00	89	0.14	AA00
25	2g5k_B_G28_U29	AAA	AA00	80	0.36	AA00
26	2g5k_B_U29_C30	AAw	AA11	80	0.22	AA11
27	2g5k_B_C30_G31	AAA	AA00	55	0.36	AA00
28	2g5k_B_G31_C32	AAA	AA00	96	0.14	AA00
29	2g5k_B_C32_U33	AAA	AA00	73	0.24	AA00
30	2g5k_B_U33_C34	AAA	AA00	93	0.18	AA00
31	2g5k_B_C34_C35	AAA	AA00	77	0.23	AA00
32	2g5k_B_C35_G36	AAA	AA00	79	0.10	AA00
33	2g5k_B_G36_G37	AAA	AA00	83	0.23	AA00
34	2g5k_B_G37_A38	AAA	AA00	86	0.24	AA00
35	2g5k_B_A38_A39	NAN	NANT	0	0.68	OP04
36	2g5k_B_A39_A40	NAN	NANT	0	1.50	OP16
37	2g5k_B_A40_A41	NAN	NANT	0	0.35	OP06
38	2g5k_B_A41_G42	NAN	NANT	0	1.15	OP12
39	2g5k_B_G42_U43	NAN	NANT	0	0.64	AA12
40	2g5k_B_U43_C44	AAA	AA00	88	0.23	AA00
41	2g5k_B_C44_G45	AAA	AA00	83	0.21	AA00
42	2g5k_B_G45_C46	AAA	AA00	87	0.23	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

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