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Conformers: ABBIImiBZICOPNSYNN
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METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET

Results of the assignment of 148 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
0012fmt_C_C1_G2NANNANT00.92 OP05
0022fmt_C_G2_C3AAAAA08290.34 AA08
0032fmt_C_C3_G4AAAAA00730.35 AA00
0042fmt_C_G4_G5AAAAA00680.27 AA00
0052fmt_C_G5_G6AAAAA00690.28 AA00
0062fmt_C_G6_G7AAAAA00520.25 AA00
0072fmt_C_G7_4SU8NANNANT01.72 OP16
0082fmt_C_4SU8_G9NANNANT01.25 IC03
0092fmt_C_G9_G10NANNANT00.95 OP12
0102fmt_C_G10_A11AAAAA00210.34 AA00
0112fmt_C_A11_G12AAAAA00790.16 AA00
0122fmt_C_G12_C13AAwAA01730.15 AA01
0132fmt_C_C13_A14AAAAA00480.37 AA00
0142fmt_C_A14_G15AAAAA04390.51 AA04
0152fmt_C_G15_C16NANNANT00.33 IC06
0162fmt_C_C16_C17NANNANT00.47 OP12
0172fmt_C_C17_U17.ANANNANT01.58 AA07
0182fmt_C_U17.A_G18NANNANT01.82 OP31
0192fmt_C_G18_G19NANNANT00.90 IC04
0202fmt_C_G19_H2U20NANNANT01.80 BA16
0212fmt_C_H2U20_A21NANNANT01.54 OP01
0222fmt_C_A21_G22OPNOP15590.44 OP15
0232fmt_C_G22_C23AAAAA00740.21 AA00
0242fmt_C_C23_U24AAAAA00940.16 AA00
0252fmt_C_U24_C25AAwAA01900.14 AA01
0262fmt_C_C25_G26AAAAA00700.25 AA00
0272fmt_C_G26_U27AAAAA00800.24 AA00
0282fmt_C_U27_C28AAAAA00700.20 AA00
0292fmt_C_C28_G29AAAAA00750.13 AA00
0302fmt_C_G29_G30AAAAA00710.20 AA00
0312fmt_C_G30_G31AAAAA00680.32 AA00
0322fmt_C_G31_OMC32AAAAA00470.39 AA00
0332fmt_C_OMC32_U33AAwAA10220.37 AA10
0342fmt_C_U33_C34NANNANT00.44 OP04
0352fmt_C_C34_A35AAAAA00710.38 AA00
0362fmt_C_A35_U36AAAAA00420.19 AA00
0372fmt_C_U36_A37NANNANT00.78 OP09
0382fmt_C_A37_A38NANNANT00.66 OP12
0392fmt_C_A38_C39AAAAA00500.27 AA00
0402fmt_C_C39_C40AAAAA00720.20 AA00
0412fmt_C_C40_C41AAAAA00890.13 AA00
0422fmt_C_C41_G42AAAAA00900.19 AA00
0432fmt_C_G42_A43AAAAA00970.18 AA00
0442fmt_C_A43_A44AAAAA08660.29 AA08
0452fmt_C_A44_G45AAAAA08430.39 AA08
0462fmt_C_G45_A46NANNANT00.46 IC01
0472fmt_C_A46_U47NANNANT02.28 OP01
0482fmt_C_U47_C48NANNANT01.49 OP17
0492fmt_C_C48_G49NANNANT01.79 OP06
0502fmt_C_G49_U50AAAAA00390.28 AA00
0512fmt_C_U50_C51AAAAA00680.23 AA00
0522fmt_C_C51_G52AAAAA00510.26 AA00
0532fmt_C_G52_G53AAAAA00570.29 AA00
0542fmt_C_G53_5MU54AAAAA00590.28 AA00
0552fmt_C_C56_A57AAAAA08780.28 AA08
0562fmt_C_A57_A58ICLIC01480.47 IC01
0572fmt_C_A58_A59NANNANT00.48 OP25
0582fmt_C_A59_U60A-BAB05460.47 AB05
0592fmt_C_U60_C61OPNOP12690.17 OP12
0602fmt_C_C61_C62AAAAA00220.36 AA00
0612fmt_C_C62_G63AAAAA00910.14 AA00
0622fmt_C_G63_G64AAAAA00350.25 AA00
0632fmt_C_G64_C65AAAAA00760.29 AA00
0642fmt_C_C65_C66AAAAA00860.16 AA00
0652fmt_C_C66_C67AAAAA00910.25 AA00
0662fmt_C_C67_C68AAAAA00640.24 AA00
0672fmt_C_C68_C69AAAAA00870.15 AA00
0682fmt_C_C69_G70AAAAA00360.32 AA00
0692fmt_C_G70_C71AAAAA08620.33 AA08
0702fmt_C_C71_A72AAAAA08220.55 AA08
0712fmt_C_A72_A73AAAAA00420.38 AA00
0722fmt_C_A73_C74AAAAA00350.40 AA00
0732fmt_C_C74_C75AAAAA00390.32 AA00
0742fmt_C_C75_A76A-BAB05610.26 AB05
0752fmt_D_C1_G2NANNANT00.88 OP29
0762fmt_D_G2_C3AAAAA00490.27 AA00
0772fmt_D_C3_G4AAAAA00750.32 AA00
0782fmt_D_G4_G5AAAAA00710.24 AA00
0792fmt_D_G5_G6AAAAA00750.22 AA00
0802fmt_D_G6_G7AAAAA00190.31 AA00
0812fmt_D_G7_4SU8NANNANT01.70 OP16
0822fmt_D_4SU8_G9NANNANT01.25 IC03
0832fmt_D_G9_G10NANNANT00.97 OP12
0842fmt_D_G10_A11AAAAA00260.35 AA00
0852fmt_D_A11_G12AAAAA00620.20 AA00
0862fmt_D_G12_C13AAwAA10720.19 AA10
0872fmt_D_C13_A14AAAAA00440.37 AA00
0882fmt_D_A14_G15AAAAA04290.50 AA04
0892fmt_D_G15_C16NANNANT00.37 IC06
0902fmt_D_C16_C17NANNANT00.48 OP12
0912fmt_D_C17_U17.ANANNANT01.62 AA07
0922fmt_D_U17.A_G18NANNANT01.95 OP16
0932fmt_D_G18_G19NANNANT01.09 BB11
0942fmt_D_G19_H2U20NANNANT01.89 BB11
0952fmt_D_H2U20_A21NANNANT00.72 OP20
0962fmt_D_A21_G22OPNOP15590.38 OP15
0972fmt_D_G22_C23AAAAA00620.23 AA00
0982fmt_D_C23_U24AAAAA00820.18 AA00
0992fmt_D_U24_C25AAwAA01850.15 AA01
1002fmt_D_C25_G26AAAAA00560.29 AA00
1012fmt_D_G26_U27AAAAA00840.19 AA00
1022fmt_D_U27_C28AAAAA00700.21 AA00
1032fmt_D_C28_G29AAAAA00750.16 AA00
1042fmt_D_G29_G30AAAAA00810.20 AA00
1052fmt_D_G30_G31AAAAA00660.30 AA00
1062fmt_D_G31_OMC32AAAAA08730.33 AA08
1072fmt_D_OMC32_U33AAAAA04680.41 AA04
1082fmt_D_U33_C34OPNOP04690.19 OP04
1092fmt_D_C34_A35AAAAA00610.38 AA00
1102fmt_D_A35_U36AAAAA00380.25 AA00
1112fmt_D_U36_A37NANNANT01.16 ZZ1S
1122fmt_D_A37_A38NANNANT01.05 AAS1
1132fmt_D_A38_C39AAAAA00630.26 AA00
1142fmt_D_C39_C40AAAAA00920.20 AA00
1152fmt_D_C40_C41AAAAA00840.17 AA00
1162fmt_D_C41_G42AAAAA00910.18 AA00
1172fmt_D_G42_A43AAAAA00900.18 AA00
1182fmt_D_A43_A44AAAAA00430.20 AA00
1192fmt_D_A44_G45AAAAA08530.40 AA08
1202fmt_D_G45_A46NANNANT00.48 IC02
1212fmt_D_A46_U47NANNANT02.29 OP01
1222fmt_D_U47_C48NANNANT01.17 OP13
1232fmt_D_C48_G49NANNANT01.72 OP06
1242fmt_D_G49_U50AAAAA00330.30 AA00
1252fmt_D_U50_C51AAAAA00790.18 AA00
1262fmt_D_C51_G52AAAAA00390.28 AA00
1272fmt_D_G52_G53AAAAA00710.25 AA00
1282fmt_D_G53_5MU54AAAAA00490.30 AA00
1292fmt_D_C56_A57AAAAA00590.38 AA00
1302fmt_D_A57_A58ICLIC01290.52 IC01
1312fmt_D_A58_A59NANNANT00.56 OP25
1322fmt_D_A59_U60A-BAB05490.50 AB05
1332fmt_D_U60_C61OPNOP12770.17 OP12
1342fmt_D_C61_C62AAAAA00200.37 AA00
1352fmt_D_C62_G63AAAAA00930.12 AA00
1362fmt_D_G63_G64AAAAA00550.26 AA00
1372fmt_D_G64_C65AAAAA00810.29 AA00
1382fmt_D_C65_C66AAAAA00950.12 AA00
1392fmt_D_C66_C67AAAAA00890.27 AA00
1402fmt_D_C67_C68AAAAA00690.23 AA00
1412fmt_D_C68_C69AAAAA00880.13 AA00
1422fmt_D_C69_G70AAAAA04420.44 AA04
1432fmt_D_G70_C71AAAAA00450.36 AA00
1442fmt_D_C71_A72AAAAA08110.55 AA08
1452fmt_D_A72_A73AAAAA00370.40 AA00
1462fmt_D_A73_C74AAAAA00590.35 AA00
1472fmt_D_C74_C75NANNANT00.35 AA00
1482fmt_D_C75_A76NANNANT00.25 AB05

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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