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Conformers: ABBIImiBZICOPNSYNN
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Two hepatitis c virus ns3 helicase domains complexed with the same strand of dna

Results of the assignment of 14 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
012f55_D_DU14_DU15NANNANT00.77 AA11
022f55_D_DU15_DU16NANNANT00.56 AA02
032f55_D_DU16_DU17NANNANT00.63 AB1S
042f55_D_DU17_DU18NANNANT01.67 ZZS1
052f55_D_DU18_DU19NANNANT00.72 OP12
062f55_D_DU19_DU20NANNANT01.23 OP30
072f55_D_DU20_DU21NANNANT00.89 OP04
082f55_D_DU21_DU22NANNANT00.80 OP08
092f55_D_DU22_DU23AAwAA01140.36 AA01
102f55_D_DU23_DU24AAAAA09130.59 AA09
112f55_D_DU24_DU25AAAAA02140.55 AA02
122f55_D_DU25_DU26NANNANT00.59 AA06
132f55_E_DU6_DU7AAwAA01300.33 AA01
142f55_E_DU7_DU8NANNANT00.60 AA06

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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