DNATCO v4.1: results

Guanine riboswitch U22A, A52U mutant bound to hypoxanthine

Results of the assignment of 66 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2eeu_A_G15_G16	AAA	AA00	80	0.21	AA00
02	2eeu_A_G16_A17	AAA	AA00	67	0.18	AA00
03	2eeu_A_A17_C18	AAw	AA06	30	0.24	AA06
04	2eeu_A_C18_A19	AAA	AA00	54	0.27	AA00
05	2eeu_A_A19_U20	AAA	AA00	86	0.14	AA00
06	2eeu_A_U20_A21	AAA	AA00	66	0.29	AA00
07	2eeu_A_A21_A22	NAN	NANT	0	0.85	OP04
08	2eeu_A_A22_A23	NAN	NANT	0	1.91	AA01
09	2eeu_A_A23_A24	NAN	NANT	0	0.98	OP29
10	2eeu_A_A24_U25	OPN	OP01	83	0.30	OP01
11	2eeu_A_U25_C26	AAA	AA08	58	0.38	AA08
12	2eeu_A_C26_G27	AAu	AA12	65	0.42	AA12
13	2eeu_A_G27_C28	AAA	AA00	44	0.28	AA00
14	2eeu_A_C28_G29	AAA	AA00	81	0.14	AA00
15	2eeu_A_G29_U30	AAA	AA00	73	0.22	AA00
16	2eeu_A_U30_G31	AAA	AA00	77	0.17	AA00
17	2eeu_A_G31_G32	AAA	AA00	60	0.28	AA00
18	2eeu_A_G32_A33	AAA	AA00	63	0.28	AA00
19	2eeu_A_A33_U34	A-B	AB05	44	0.21	AB05
20	2eeu_A_U34_A35	NAN	NANT	0	0.99	OP22
21	2eeu_A_A35_U36	OPN	OP21	12	0.46	OP21
22	2eeu_A_U36_G37	OPN	OP11	87	0.39	OP11
23	2eeu_A_G37_G38	AAA	AA00	69	0.19	AA00
24	2eeu_A_G38_C39	OPN	OP01	30	0.35	OP01
25	2eeu_A_C39_A40	AAA	AA00	29	0.34	AA00
26	2eeu_A_A40_C41	AAA	AA00	78	0.12	AA00
27	2eeu_A_C41_G42	AAA	AA00	88	0.16	AA00
28	2eeu_A_G42_C43	AAA	AA00	79	0.23	AA00
29	2eeu_A_C43_A44	AAA	AA04	95	0.16	AA04
30	2eeu_A_A44_A45	AAA	AA00	83	0.24	AA00
31	2eeu_A_A45_G46	AAA	AA00	69	0.29	AA00
32	2eeu_A_G46_U47	NAN	NANT	0	0.58	IC01
33	2eeu_A_U47_U48	NAN	NANT	0	0.78	OP17
34	2eeu_A_U48_U49	NAN	NANT	0	0.57	OP20
35	2eeu_A_U49_C50	OPN	OP15	19	0.77	OP15
36	2eeu_A_C50_U51	AAA	AA00	22	0.47	AA00
37	2eeu_A_U51_U52	NAN	NANT	0	0.47	AA01
38	2eeu_A_U52_C53	NAN	NANT	0	0.55	AA01
39	2eeu_A_C53_C54	NAN	NANT	0	0.82	OP01
40	2eeu_A_C54_G55	AAA	AA00	26	0.35	AA00
41	2eeu_A_G55_G56	AAA	AA08	87	0.27	AA08
42	2eeu_A_G56_G57	AAA	AA00	87	0.15	AA00
43	2eeu_A_G57_C58	AAA	AA00	82	0.26	AA00
44	2eeu_A_C58_A59	AAA	AA00	88	0.18	AA00
45	2eeu_A_A59_C60	AAA	AA00	51	0.33	AA00
46	2eeu_A_C60_C61	AAA	AA00	85	0.15	AA00
47	2eeu_A_C61_G62	ICL	IC04	26	0.62	IC04
48	2eeu_A_G62_U63	NAN	NANT	0	0.34	OP15
49	2eeu_A_U63_A64	NAN	NANT	0	1.61	BB14
50	2eeu_A_A64_A65	NAN	NANT	0	0.38	AB01
51	2eeu_A_A65_A66	NAN	NANT	0	0.50	BA08
52	2eeu_A_A66_U67	NAN	NANT	0	0.96	OP08
53	2eeu_A_U67_G68	NAN	NANT	0	0.51	AA01
54	2eeu_A_G68_U69	NAN	NANT	0	0.41	AA08
55	2eeu_A_U69_C70	AAA	AA00	92	0.13	AA00
56	2eeu_A_C70_C71	AAA	AA08	77	0.27	AA08
57	2eeu_A_C71_G72	AAA	AA00	88	0.20	AA00
58	2eeu_A_G72_A73	NAN	NANT	0	0.46	IC04
59	2eeu_A_A73_C74	AAA	AA00	74	0.25	AA00
60	2eeu_A_C74_U75	AAA	AA00	87	0.17	AA00
61	2eeu_A_U75_A76	AAA	AA00	83	0.15	AA00
62	2eeu_A_A76_U77	AAA	AA00	86	0.14	AA00
63	2eeu_A_U77_G78	AAA	AA00	85	0.15	AA00
64	2eeu_A_G78_U79	AAA	AA00	91	0.13	AA00
65	2eeu_A_U79_C80	AAA	AA00	92	0.22	AA00
66	2eeu_A_C80_C81	AAw	AA10	71	0.37	AA10

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 66 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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