DNATCO v4.1: results

Crystal structure of the ternary complex of yeast tyrosyl-tRNA synthetase

Results of the assignment of 56 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2dlc_Y_C501_U502	AAA	AA00	79	0.23	AA00
02	2dlc_Y_U502_C503	AAA	AA00	78	0.16	AA00
03	2dlc_Y_C503_U504	AAA	AA00	83	0.25	AA00
04	2dlc_Y_U504_C505	AAA	AA08	80	0.28	AA08
05	2dlc_Y_C505_G506	AAw	AA01	32	0.18	AA01
06	2dlc_Y_G506_G507	A-B	AB05	33	0.26	AB05
07	2dlc_Y_G507_U508	OPN	OP11	51	0.37	OP11
08	2dlc_Y_U508_A509	NAN	NANT	0	1.14	IC03
09	2dlc_Y_A509_2MG510	NAN	NANT	0	1.49	OP26
10	2dlc_Y_2MG510_C511	AAA	AA00	71	0.18	AA00
11	2dlc_Y_C511_C512	AAA	AA00	62	0.29	AA00
12	2dlc_Y_C512_A513	NAN	NANT	0	0.47	AA10
13	2dlc_Y_A513_A514	AAu	AA12	52	0.34	AA12
14	2dlc_Y_A514_G515	AAA	AA04	53	0.44	AA04
15	2dlc_Y_OMG518_G519	ICL	IC05	13	0.50	IC05
16	2dlc_Y_A521_A522	NAN	NANT	0	0.81	OP07
17	2dlc_Y_A522_G523	AAw	AA05	69	0.29	AA05
18	2dlc_Y_G523_G524	AAA	AA08	67	0.26	AA08
19	2dlc_Y_G524_C525	AAA	AA00	86	0.17	AA00
20	2dlc_Y_C525_M2G526	AAA	AA00	53	0.34	AA00
21	2dlc_Y_M2G526_C527	AAA	AA00	79	0.22	AA00
22	2dlc_Y_C527_A528	NAN	NANT	0	0.38	AB04
23	2dlc_Y_A528_A529	BBB	BB00	28	0.39	BB00
24	2dlc_Y_A529_G530	BBw	BB17	49	0.42	BB17
25	2dlc_Y_A536_6IA537	AAA	AA00	54	0.35	AA00
26	2dlc_Y_6IA537_A538	AAA	AA08	82	0.18	AA08
27	2dlc_Y_U542_G543	AAA	AA04	87	0.22	AA04
28	2dlc_Y_G543_A544	AAA	AA00	82	0.19	AA00
29	2dlc_Y_A544_G545	AAA	AA00	56	0.39	AA00
30	2dlc_Y_U547_5MC548	NAN	NANT	0	0.38	IC04
31	2dlc_Y_5MC548_G549	NAN	NANT	0	1.29	OP05
32	2dlc_Y_G549_G550	AAA	AA00	67	0.21	AA00
33	2dlc_Y_G550_G551	AAA	AA00	74	0.15	AA00
34	2dlc_Y_G551_C552	AAA	AA00	94	0.11	AA00
35	2dlc_Y_C552_G553	AAw	AA06	14	0.34	AA06
36	2dlc_Y_G553_5MU554	AAA	AA00	57	0.25	AA00
37	2dlc_Y_C556_G557	AAA	AA00	56	0.29	AA00
38	2dlc_Y_G557_1MA558	ICL	IC01	92	0.29	IC01
39	2dlc_Y_1MA558_C559	OPN	OP25	93	0.11	OP25
40	2dlc_Y_C559_U560	A-B	AB05	27	0.33	AB05
41	2dlc_Y_U560_C561	OPN	OP12	90	0.12	OP12
42	2dlc_Y_C561_G562	AAA	AA00	60	0.24	AA00
43	2dlc_Y_G562_C563	AAA	AA00	86	0.11	AA00
44	2dlc_Y_C563_C564	AAA	AA00	92	0.10	AA00
45	2dlc_Y_C564_C565	AAA	AA00	70	0.23	AA00
46	2dlc_Y_C565_C566	AAA	AA00	86	0.12	AA00
47	2dlc_Y_C566_C567	AAA	AA00	96	0.10	AA00
48	2dlc_Y_C567_G568	AAA	AA00	70	0.20	AA00
49	2dlc_Y_G568_G569	AAA	AA00	77	0.19	AA00
50	2dlc_Y_G569_G570	AAA	AA00	86	0.12	AA00
51	2dlc_Y_G570_A571	AAA	AA08	90	0.20	AA08
52	2dlc_Y_A571_G572	AAA	AA00	88	0.21	AA00
53	2dlc_Y_G572_A573	AAA	AA00	46	0.35	AA00
54	2dlc_Y_A573_C574	NAN	NANT	0	1.24	OP07
55	2dlc_Y_C574_C575	AAA	AA00	33	0.45	AA00
56	2dlc_Y_C575_A576	NAN	NANT	0	1.30	OP24

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 56 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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