DNATCO v4.1: results

Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the pre-reaction state

Results of the assignment of 69 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2det_C_G1_U2	NAN	NANT	0	0.57	OP07
02	2det_C_U2_C3	AAA	AA00	37	0.33	AA00
03	2det_C_C3_C4	NAN	NANT	0	0.88	AB04
04	2det_C_C4_C5	AAA	AA00	72	0.22	AA00
05	2det_C_C5_C6	AAw	AA01	50	0.31	AA01
06	2det_C_C6_U7	AAA	AA08	12	0.55	AA08
07	2det_C_U7_U8	NAN	NANT	0	1.63	OP31
08	2det_C_U8_C9	NAN	NANT	0	0.69	IC07
09	2det_C_C9_G10	NAN	NANT	0	1.30	OP12
10	2det_C_G10_U11	AAA	AA08	67	0.18	AA08
11	2det_C_U11_C12	AAA	AA00	71	0.23	AA00
12	2det_C_C12_U13	AAw	AA01	80	0.31	AA01
13	2det_C_U13_A14	AAu	AA12	44	0.41	AA12
14	2det_C_A14_G15	AAA	AA08	40	0.47	AA08
15	2det_C_G15_A16	NAN	NANT	0	1.57	OP31
16	2det_C_A16_G17	NAN	NANT	0	1.27	OP06
17	2det_C_G17_G18	NAN	NANT	0	0.86	AA01
18	2det_C_G18_C19	NAN	NANT	0	0.56	OP12
19	2det_C_C19_C20	NAN	NANT	0	1.99	OP06
20	2det_C_C20.A_A21	NAN	NANT	0	0.66	OP06
21	2det_C_C20_C20.A	NAN	NANT	0	0.94	OP18
22	2det_C_A21_G22	AAu	AA07	42	0.28	AA07
23	2det_C_G22_G23	AAA	AA00	65	0.25	AA00
24	2det_C_G23_A24	AAA	AA00	75	0.20	AA00
25	2det_C_A24_C25	AAA	AA00	82	0.17	AA00
26	2det_C_C25_A26	AAA	AA00	41	0.32	AA00
27	2det_C_A26_C27	AAA	AA00	43	0.34	AA00
28	2det_C_C27_C28	AAA	AA00	69	0.27	AA00
29	2det_C_C28_G29	AAA	AA00	88	0.12	AA00
30	2det_C_G29_C30	AAA	AA00	82	0.15	AA00
31	2det_C_C30_C31	AAA	AA00	62	0.29	AA00
32	2det_C_C31_C32	AAA	AA00	59	0.40	AA00
33	2det_C_C32_U33	AAA	AA08	68	0.36	AA08
34	2det_C_U33_U34	NAN	NANT	0	1.25	OP17
35	2det_C_U34_U35	NAN	NANT	0	1.48	OP31
36	2det_C_U35_C36	AAA	AA00	27	0.32	AA00
37	2det_C_C36_A37	NAN	NANT	0	0.48	AA10
38	2det_C_A37_C38	NAN	NANT	0	0.51	AB2S
39	2det_C_C38_G39	SYN	AAS1	61	0.38	AAS1
40	2det_C_G39_G40	AAA	AA00	52	0.26	AA00
41	2det_C_G40_C41	AAA	AA00	78	0.20	AA00
42	2det_C_C41_G42	AAw	AA01	75	0.21	AA01
43	2det_C_G42_G43	AAA	AA08	76	0.22	AA08
44	2det_C_G43_U44	AAA	AA00	78	0.24	AA00
45	2det_C_U44_A45	AAA	AA00	21	0.41	AA00
46	2det_C_A45_A46	NAN	NANT	0	0.71	AA13
47	2det_C_A46_C47	NAN	NANT	0	0.49	IC04
48	2det_C_C47_A49	NAN	NANT	0	1.59	OP06
49	2det_C_A49_G50	AAA	AA00	69	0.20	AA00
50	2det_C_G50_G51	AAA	AA00	64	0.22	AA00
51	2det_C_G51_G52	AAw	AA01	43	0.32	AA01
52	2det_C_G52_G53	NAN	NANT	0	0.85	AA11
53	2det_C_G53_U54	AAA	AA04	24	0.52	AA04
54	2det_C_U54_U55	AAw	AA01	70	0.28	AA01
55	2det_C_U55_C56	NAN	NANT	0	0.48	OP04
56	2det_C_C56_G57	AAA	AA00	41	0.39	AA00
57	2det_C_G57_A58	NAN	NANT	0	1.34	AA07
58	2det_C_A58_A59	NAN	NANT	0	0.56	OP03
59	2det_C_A59_U60	AAA	AA08	14	0.42	AA08
60	2det_C_U60_C61	NAN	NANT	0	0.44	OP12
61	2det_C_C61_C62	AAA	AA00	45	0.23	AA00
62	2det_C_C62_C63	AAA	AA00	82	0.28	AA00
63	2det_C_C63_C64	AAw	AA06	78	0.24	AA06
64	2det_C_C64_U65	NAN	NANT	0	0.69	AA06
65	2det_C_U65_A66	NAN	NANT	0	0.81	AA06
66	2det_C_A66_G67	NAN	NANT	0	1.22	AA06
67	2det_C_G67_G68	NAN	NANT	0	0.54	AA01
68	2det_C_G68_G69	AAw	AA10	9	0.36	AA10
69	2det_C_G69_G70	NAN	NANT	0	1.21	IC04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 69 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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