DNATCO v4.1: results

Crystal structure of Glu-tRNA(Gln) amidotransferase in the complex with tRNA(Gln)

Results of the assignment of 144 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2d6f_E_A901_G902	AAw	AA01	45	0.36	AA01
002	2d6f_E_G902_U903	AAA	AA08	9	0.42	AA08
003	2d6f_E_U903_C904	AAA	AA00	65	0.20	AA00
004	2d6f_E_C904_C905	AAw	AA01	81	0.29	AA01
005	2d6f_E_C905_C906	AAA	AA08	94	0.17	AA08
006	2d6f_E_C906_G907	AAA	AA00	38	0.44	AA00
007	2d6f_E_G907_U908	NAN	NANT	0	1.16	OP30
008	2d6f_E_U908_G909	NAN	NANT	0	1.13	IC04
009	2d6f_E_G909_G910	NAN	NANT	0	1.57	OP26
010	2d6f_E_G910_G911	AAA	AA00	86	0.15	AA00
011	2d6f_E_G911_G912	AAw	AA05	66	0.46	AA05
012	2d6f_E_G912_U913	AAA	AA08	54	0.25	AA08
013	2d6f_E_U913_A914	AAw	AA01	20	0.49	AA01
014	2d6f_E_A914_G915	AAA	AA08	68	0.40	AA08
015	2d6f_E_G915_U916	AAw	AA06	61	0.28	AA06
016	2d6f_E_U916_G917	NAN	NANT	0	1.25	OP29
017	2d6f_E_G917_G918	NAN	NANT	0	1.01	AA07
018	2d6f_E_G918_U919	NAN	NANT	0	0.82	AA12
019	2d6f_E_U919_A920	NAN	NANT	0	1.83	OP16
020	2d6f_E_A920_A921	NAN	NANT	0	0.84	AA01
021	2d6f_E_A921_U922	AAu	AA07	62	0.63	AA07
022	2d6f_E_U922_C923	AAw	AA11	58	0.40	AA11
023	2d6f_E_C923_C924	AAA	AA00	64	0.26	AA00
024	2d6f_E_C924_U925	AAA	AA00	32	0.36	AA00
025	2d6f_E_U925_G926	AAA	AA00	20	0.26	AA00
026	2d6f_E_G926_C927	AAA	AA00	42	0.28	AA00
027	2d6f_E_C927_U928	AAA	AA00	13	0.40	AA00
028	2d6f_E_U928_G929	NAN	NANT	0	0.58	AA10
029	2d6f_E_G929_G930	AAA	AA08	13	0.40	AA08
030	2d6f_E_G930_G931	AAA	AA00	88	0.14	AA00
031	2d6f_E_G931_C932	AAA	AA08	80	0.25	AA08
032	2d6f_E_C932_U933	NAN	NANT	0	0.80	AA05
033	2d6f_E_U933_U934	NAN	NANT	0	1.81	OP06
034	2d6f_E_U934_U935	NAN	NANT	0	1.09	OP06
035	2d6f_E_U935_G936	NAN	NANT	0	2.01	IC04
036	2d6f_E_G936_G937	NAN	NANT	0	0.51	AA00
037	2d6f_E_G937_A938	NAN	NANT	0	0.87	AA00
038	2d6f_E_A938_C939	AAA	AA00	74	0.24	AA00
039	2d6f_E_C939_C940	AAA	AA00	63	0.33	AA00
040	2d6f_E_C940_C941	AAw	AA06	32	0.39	AA06
041	2d6f_E_C941_G942	AAw	AA10	12	0.44	AA10
042	2d6f_E_G942_G943	AAA	AA00	32	0.34	AA00
043	2d6f_E_G943_C944	AAA	AA00	81	0.26	AA00
044	2d6f_E_C944_G945	AAA	AA04	24	0.55	AA04
045	2d6f_E_G945_A947	NAN	NANT	0	0.92	AA06
046	2d6f_E_A947_C948	NAN	NANT	0	0.95	AA03
047	2d6f_E_C948_A949	NAN	NANT	0	1.05	OP06
048	2d6f_E_A949_G950	AAA	AA00	22	0.32	AA00
049	2d6f_E_G950_C951	AAA	AA00	55	0.28	AA00
050	2d6f_E_C951_G952	AAw	AA01	85	0.16	AA01
051	2d6f_E_G952_G953	AAA	AA08	91	0.20	AA08
052	2d6f_E_G953_U954	AAA	AA00	81	0.20	AA00
053	2d6f_E_U954_U955	AAA	AA00	25	0.52	AA00
054	2d6f_E_U955_C956	OPN	OP04	60	0.16	OP04
055	2d6f_E_C956_G957	AAw	AA06	50	0.35	AA06
056	2d6f_E_G957_A958	NAN	NANT	0	0.50	IC02
057	2d6f_E_A958_C959	NAN	NANT	0	1.10	OP18
058	2d6f_E_C959_U960	AAA	AA04	21	0.61	AA04
059	2d6f_E_U960_C961	NAN	NANT	0	0.59	OP12
060	2d6f_E_C961_C962	AAA	AA00	41	0.24	AA00
061	2d6f_E_C962_G963	AAA	AA08	78	0.23	AA08
062	2d6f_E_G963_C964	AAA	AA00	80	0.25	AA00
063	2d6f_E_C964_U965	AAw	AA01	34	0.40	AA01
064	2d6f_E_U965_C966	AAA	AA09	36	0.29	AA09
065	2d6f_E_C966_G967	NAN	NANT	0	0.28	AA08
066	2d6f_E_G967_G968	AAA	AA00	59	0.29	AA00
067	2d6f_E_G968_G969	AAA	AA00	53	0.23	AA00
068	2d6f_E_G969_A970	AAA	AA00	12	0.37	AA00
069	2d6f_E_A970_C971	AAA	AA00	40	0.34	AA00
070	2d6f_E_C971_U972	AAA	AA00	69	0.26	AA00
071	2d6f_E_U972_A973	AAw	AA06	56	0.40	AA06
072	2d6f_F_A901_G902	AAA	AA00	10	0.42	AA00
073	2d6f_F_G902_U903	AAA	AA00	85	0.17	AA00
074	2d6f_F_U903_C904	AAA	AA00	51	0.44	AA00
075	2d6f_F_C904_C905	AAw	AA06	78	0.27	AA06
076	2d6f_F_C905_C906	AAA	AA08	63	0.26	AA08
077	2d6f_F_C906_G907	AAA	AA00	45	0.19	AA00
078	2d6f_F_G907_U908	NAN	NANT	0	1.05	OP30
079	2d6f_F_U908_G909	NAN	NANT	0	1.19	IC04
080	2d6f_F_G909_G910	NAN	NANT	0	1.32	AA07
081	2d6f_F_G910_G911	AAA	AA08	17	0.37	AA08
082	2d6f_F_G911_G912	AAw	AA11	72	0.22	AA11
083	2d6f_F_G912_U913	AAA	AA00	23	0.50	AA00
084	2d6f_F_U913_A914	AAw	AA01	36	0.41	AA01
085	2d6f_F_A914_G915	AAA	AA08	62	0.40	AA08
086	2d6f_F_G915_U916	AAw	AA01	55	0.31	AA01
087	2d6f_F_U916_G917	NAN	NANT	0	1.17	OP29
088	2d6f_F_G917_G918	AAu	AA12	6	0.75	AA12
089	2d6f_F_G918_U919	NAN	NANT	0	0.98	AA03
090	2d6f_F_U919_A920	NAN	NANT	0	1.58	OP31
091	2d6f_F_A920_A921	NAN	NANT	0	0.72	AA01
092	2d6f_F_A921_U922	AAu	AA07	55	0.65	AA07
093	2d6f_F_U922_C923	AAw	AA06	66	0.28	AA06
094	2d6f_F_C923_C924	AAA	AA08	83	0.14	AA08
095	2d6f_F_C924_U925	AAA	AA00	47	0.43	AA00
096	2d6f_F_U925_G926	AAA	AA00	92	0.19	AA00
097	2d6f_F_G926_C927	AAA	AA03	64	0.27	AA03
098	2d6f_F_C927_U928	AAA	AA08	61	0.28	AA08
099	2d6f_F_U928_G929	AAu	AA12	74	0.17	AA12
100	2d6f_F_G929_G930	AAA	AA08	78	0.17	AA08
101	2d6f_F_G930_G931	AAA	AA00	81	0.23	AA00
102	2d6f_F_G931_C932	AAA	AA00	44	0.31	AA00
103	2d6f_F_C932_U933	NAN	NANT	0	1.13	AA11
104	2d6f_F_U933_U934	NAN	NANT	0	1.72	OP06
105	2d6f_F_U934_U935	NAN	NANT	0	1.17	OP06
106	2d6f_F_U935_G936	NAN	NANT	0	1.89	OP16
107	2d6f_F_G936_G937	AAA	AA08	45	0.47	AA08
108	2d6f_F_G937_A938	AAA	AA00	39	0.34	AA00
109	2d6f_F_A938_C939	AAA	AA00	79	0.23	AA00
110	2d6f_F_C939_C940	AAA	AA00	17	0.28	AA00
111	2d6f_F_C940_C941	AAw	AA01	65	0.42	AA01
112	2d6f_F_C941_G942	AAA	AA08	64	0.28	AA08
113	2d6f_F_G942_G943	AAA	AA00	17	0.46	AA00
114	2d6f_F_G943_C944	AAA	AA00	87	0.28	AA00
115	2d6f_F_C944_G945	AAA	AA08	57	0.33	AA08
116	2d6f_F_G945_A947	NAN	NANT	0	0.69	IC04
117	2d6f_F_A947_C948	NAN	NANT	0	1.20	AA03
118	2d6f_F_C948_A949	OPN	OP05	33	0.65	OP05
119	2d6f_F_A949_G950	AAA	AA00	60	0.16	AA00
120	2d6f_F_G950_C951	AAA	AA00	12	0.40	AA00
121	2d6f_F_C951_G952	AAw	AA01	73	0.22	AA01
122	2d6f_F_G952_G953	AAA	AA00	66	0.24	AA00
123	2d6f_F_G953_U954	AAA	AA00	79	0.20	AA00
124	2d6f_F_U954_U955	AAA	AA00	32	0.54	AA00
125	2d6f_F_U955_C956	OPN	OP04	69	0.19	OP04
126	2d6f_F_C956_G957	AAw	AA06	74	0.38	AA06
127	2d6f_F_G957_A958	NAN	NANT	0	0.59	IC02
128	2d6f_F_A958_C959	NAN	NANT	0	1.96	OP07
129	2d6f_F_C959_U960	NAN	NANT	0	0.91	AA03
130	2d6f_F_U960_C961	NAN	NANT	0	0.52	OP12
131	2d6f_F_C961_C962	AAA	AA00	37	0.28	AA00
132	2d6f_F_C962_G963	AAA	AA00	91	0.13	AA00
133	2d6f_F_G963_C964	AAA	AA00	49	0.25	AA00
134	2d6f_F_C964_U965	AAw	AA06	66	0.30	AA06
135	2d6f_F_U965_C966	NAN	NANT	0	0.54	AA08
136	2d6f_F_C966_G967	AAA	AA00	79	0.27	AA00
137	2d6f_F_G967_G968	AAA	AA00	9	0.41	AA00
138	2d6f_F_G968_G969	AAA	AA00	81	0.28	AA00
139	2d6f_F_G969_A970	AAA	AA00	47	0.26	AA00
140	2d6f_F_A970_C971	AAA	AA00	64	0.23	AA00
141	2d6f_F_C971_U972	AAA	AA00	68	0.17	AA00
142	2d6f_F_U972_A973	AAw	AA01	89	0.16	AA01
143	2d6f_F_A973_C974	NAN	NANT	0	0.47	OP30
144	2d6f_F_C974_C975	NAN	NANT	0	0.36	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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N

Results of the assignment of 144 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Definitions

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