DNATCO v4.1: results

Thermus thermophilus Leucyl-tRNA synthetase complexed with a tRNAleu transcript in the post-editing conformation and a post- transfer editing substrate analogue

Results of the assignment of 152 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2bte_B_G1_C2	AAA	AA00	85	0.14	AA00
002	2bte_B_C2_C3	AAA	AA00	81	0.19	AA00
003	2bte_B_C3_G4	AAA	AA00	59	0.23	AA00
004	2bte_B_G4_G5	AAA	AA00	80	0.22	AA00
005	2bte_B_G5_G6	AAw	AA01	67	0.17	AA01
006	2bte_B_G6_G7	NAN	NANT	0	0.52	AA10
007	2bte_B_G7_U8	NAN	NANT	0	0.39	OP11
008	2bte_B_U8_G9	NAN	NANT	0	0.81	AA13
009	2bte_B_G9_G10	NAN	NANT	0	1.03	ZZS2
010	2bte_B_G10_C11	AAA	AA00	23	0.35	AA00
011	2bte_B_C11_G12	AAA	AA00	71	0.24	AA00
012	2bte_B_G12_G13	AAw	AA05	88	0.12	AA05
013	2bte_B_G13_A14	AAw	AA10	9	0.49	AA10
014	2bte_B_A14_A15	AAA	AA08	71	0.35	AA08
015	2bte_B_A15_U16	NAN	NANT	0	0.51	IC04
016	2bte_B_U16_G17	NAN	NANT	0	0.91	OP29
017	2bte_B_G17_G18	NAN	NANT	0	0.78	OP05
018	2bte_B_G18_G19	NAN	NANT	0	0.93	AB02
019	2bte_B_G19_U20	NAN	NANT	0	2.52	OP19
020	2bte_B_A20.A_G21	AAA	AA00	60	0.33	AA00
021	2bte_B_U20_A20.A	NAN	NANT	0	0.78	OP17
022	2bte_B_G21_A22	NAN	NANT	0	0.61	OP01
023	2bte_B_A22_C23	AAA	AA08	7	0.55	AA08
024	2bte_B_C23_G24	AAA	AA00	82	0.23	AA00
025	2bte_B_G24_C25	AAA	AA00	74	0.23	AA00
026	2bte_B_C25_G26	AAA	AA00	28	0.40	AA00
027	2bte_B_G26_C27	AAA	AA00	80	0.25	AA00
028	2bte_B_C27_A28	AAA	AA00	76	0.26	AA00
029	2bte_B_A28_U29	AAw	AA01	55	0.35	AA01
030	2bte_B_U29_G30	AAA	AA00	86	0.20	AA00
031	2bte_B_G30_A31	AAw	AA01	67	0.22	AA01
032	2bte_B_A31_C32	AAw	AA10	6	0.53	AA10
033	2bte_B_A38_U39	AAA	AA00	31	0.30	AA00
034	2bte_B_U39_C40	AAw	AA01	22	0.47	AA01
035	2bte_B_C40_A41	AAA	AA00	84	0.25	AA00
036	2bte_B_A41_U42	AAA	AA00	90	0.17	AA00
037	2bte_B_U42_G43	AAA	AA00	89	0.20	AA00
038	2bte_B_G43_U44	AAA	AA00	85	0.16	AA00
039	2bte_B_U44_G45	NAN	NANT	0	0.56	OP29
040	2bte_B_G45_C46	AAA	AA00	60	0.19	AA00
041	2bte_B_C46_G47	AAA	AA00	71	0.21	AA00
042	2bte_B_A47.B_A47.C	NAN	NANT	0	0.38	AA11
043	2bte_B_A47.C_G47.D	NAN	NANT	0	0.76	AA05
044	2bte_B_C47.A_A47.B	NAN	NANT	0	0.58	AA06
045	2bte_B_C47.E_G47.F	AAw	AA01	55	0.27	AA01
046	2bte_B_G47.D_C47.E	AAA	AA00	38	0.26	AA00
047	2bte_B_G47.F_U48	NAN	NANT	0	1.01	IC07
048	2bte_B_G47_C47.A	OPN	OP03	49	0.39	OP03
049	2bte_B_U48_G49	NAN	NANT	0	1.52	OP05
050	2bte_B_G49_C50	AAA	AA00	17	0.34	AA00
051	2bte_B_C50_G51	AAA	AA00	67	0.18	AA00
052	2bte_B_G51_G52	AAw	AA01	61	0.21	AA01
053	2bte_B_G52_G53	AAA	AA08	78	0.24	AA08
054	2bte_B_G53_U54	AAA	AA00	86	0.20	AA00
055	2bte_B_U54_U55	AAA	AA00	46	0.38	AA00
056	2bte_B_U55_C56	OPN	OP04	70	0.14	OP04
057	2bte_B_C56_A57	AAA	AA00	73	0.37	AA00
058	2bte_B_A57_A58	ICL	IC01	85	0.28	IC01
059	2bte_B_A58_G59	OPN	OP25	65	0.39	OP25
060	2bte_B_G59_U60	NAN	NANT	0	0.64	BB03
061	2bte_B_U60_C61	OPN	OP12	68	0.35	OP12
062	2bte_B_C61_C62	AAA	AA00	48	0.30	AA00
063	2bte_B_C62_C63	AAA	AA00	83	0.17	AA00
064	2bte_B_C63_G64	AAA	AA00	96	0.11	AA00
065	2bte_B_G64_C65	AAA	AA00	79	0.31	AA00
066	2bte_B_C65_C66	AAA	AA00	82	0.25	AA00
067	2bte_B_C66_C67	AAA	AA00	92	0.12	AA00
068	2bte_B_C67_C68	AAA	AA00	92	0.21	AA00
069	2bte_B_C68_C69	AAA	AA00	93	0.14	AA00
070	2bte_B_C69_G70	AAA	AA00	87	0.13	AA00
071	2bte_B_G70_G71	AAA	AA00	93	0.10	AA00
072	2bte_B_G71_C72	AAA	AA00	51	0.24	AA00
073	2bte_B_C72_A73	NAN	NANT	0	2.02	OP29
074	2bte_B_A73_C74	AAA	AA00	83	0.17	AA00
075	2bte_B_C74_C75	AAA	AA00	84	0.18	AA00
076	2bte_B_C75_A76	AAA	AA09	11	0.31	AA09
077	2bte_E_G1_C2	AAA	AA00	92	0.13	AA00
078	2bte_E_C2_C3	AAA	AA00	89	0.15	AA00
079	2bte_E_C3_G4	AAA	AA00	91	0.12	AA00
080	2bte_E_G4_G5	AAA	AA00	94	0.11	AA00
081	2bte_E_G5_G6	AAw	AA01	69	0.20	AA01
082	2bte_E_G6_G7	NAN	NANT	0	0.46	AA10
083	2bte_E_G7_U8	OPN	OP11	52	0.33	OP11
084	2bte_E_U8_G9	NAN	NANT	0	0.63	IC07
085	2bte_E_G9_G10	NAN	NANT	0	0.89	ZZS2
086	2bte_E_G10_C11	AAA	AA00	25	0.36	AA00
087	2bte_E_C11_G12	AAA	AA00	87	0.18	AA00
088	2bte_E_G12_G13	AAw	AA05	90	0.16	AA05
089	2bte_E_G13_A14	NAN	NANT	0	0.56	AA01
090	2bte_E_A14_A15	AAA	AA08	75	0.35	AA08
091	2bte_E_A15_U16	NAN	NANT	0	0.50	IC04
092	2bte_E_U16_G17	NAN	NANT	0	0.61	OP30
093	2bte_E_G17_G18	NAN	NANT	0	0.81	OP05
094	2bte_E_G18_G19	NAN	NANT	0	0.97	AB02
095	2bte_E_G19_U20	NAN	NANT	0	1.28	OP30
096	2bte_E_A20.A_G21	AAA	AA00	29	0.30	AA00
097	2bte_E_U20_A20.A	NAN	NANT	0	0.77	OP17
098	2bte_E_G21_A22	NAN	NANT	0	0.64	OP06
099	2bte_E_A22_C23	AAA	AA08	30	0.48	AA08
100	2bte_E_C23_G24	AAA	AA00	62	0.26	AA00
101	2bte_E_G24_C25	AAA	AA00	92	0.18	AA00
102	2bte_E_C25_G26	AAA	AA00	23	0.41	AA00
103	2bte_E_G26_C27	AAA	AA00	84	0.24	AA00
104	2bte_E_C27_A28	AAA	AA00	92	0.11	AA00
105	2bte_E_A28_U29	AAw	AA06	83	0.23	AA06
106	2bte_E_U29_G30	AAA	AA00	74	0.26	AA00
107	2bte_E_G30_A31	AAw	AA01	58	0.26	AA01
108	2bte_E_A31_C32	NAN	NANT	0	0.46	AA06
109	2bte_E_A38_U39	AAA	AA00	86	0.19	AA00
110	2bte_E_U39_C40	AAw	AA01	52	0.30	AA01
111	2bte_E_C40_A41	AAA	AA00	69	0.30	AA00
112	2bte_E_A41_U42	AAA	AA00	91	0.15	AA00
113	2bte_E_U42_G43	AAA	AA00	90	0.12	AA00
114	2bte_E_G43_U44	AAA	AA00	87	0.19	AA00
115	2bte_E_U44_G45	OPN	OP29	17	0.52	OP29
116	2bte_E_G45_C46	AAA	AA00	79	0.17	AA00
117	2bte_E_C46_G47	AAA	AA00	91	0.19	AA00
118	2bte_E_A47.B_A47.C	AAw	AA11	42	0.38	AA11
119	2bte_E_A47.C_G47.D	NAN	NANT	0	0.74	AA05
120	2bte_E_C47.A_A47.B	AAw	AA05	57	0.46	AA05
121	2bte_E_C47.E_G47.F	AAw	AA06	68	0.34	AA06
122	2bte_E_G47.D_C47.E	AAA	AA00	86	0.26	AA00
123	2bte_E_G47.F_U48	NAN	NANT	0	0.76	IC04
124	2bte_E_G47_C47.A	OPN	OP03	79	0.35	OP03
125	2bte_E_U48_G49	NAN	NANT	0	1.56	OP05
126	2bte_E_G49_C50	AAA	AA00	36	0.32	AA00
127	2bte_E_C50_G51	AAA	AA00	81	0.11	AA00
128	2bte_E_G51_G52	AAw	AA01	51	0.26	AA01
129	2bte_E_G52_G53	AAA	AA08	81	0.21	AA08
130	2bte_E_G53_U54	AAA	AA00	43	0.36	AA00
131	2bte_E_U54_U55	AAA	AA00	43	0.40	AA00
132	2bte_E_U55_C56	OPN	OP04	74	0.17	OP04
133	2bte_E_C56_A57	AAA	AA00	73	0.33	AA00
134	2bte_E_A57_A58	ICL	IC01	76	0.31	IC01
135	2bte_E_A58_G59	OPN	OP25	45	0.40	OP25
136	2bte_E_G59_U60	NAN	NANT	0	0.62	BB03
137	2bte_E_U60_C61	OPN	OP12	67	0.44	OP12
138	2bte_E_C61_C62	AAA	AA00	42	0.22	AA00
139	2bte_E_C62_C63	AAA	AA00	75	0.20	AA00
140	2bte_E_C63_G64	AAA	AA00	91	0.13	AA00
141	2bte_E_G64_C65	AAA	AA00	93	0.28	AA00
142	2bte_E_C65_C66	AAA	AA00	61	0.29	AA00
143	2bte_E_C66_C67	AAA	AA00	88	0.16	AA00
144	2bte_E_C67_C68	AAA	AA00	91	0.20	AA00
145	2bte_E_C68_C69	AAA	AA00	91	0.16	AA00
146	2bte_E_C69_G70	AAA	AA00	89	0.12	AA00
147	2bte_E_G70_G71	AAA	AA00	95	0.18	AA00
148	2bte_E_G71_C72	AAA	AA00	85	0.26	AA00
149	2bte_E_C72_A73	NAN	NANT	0	1.93	OP29
150	2bte_E_A73_C74	AAA	AA00	86	0.20	AA00
151	2bte_E_C74_C75	AAA	AA00	84	0.19	AA00
152	2bte_E_C75_A76	NAN	NANT	0	0.27	AA09

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Browse conformers

Show

Color by conformation group (pyramids)

Color by NtC (balls)

A-B

B-A

B

IC

Z

N

Results of the assignment of 152 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible