DNATCO v4.1: results

Structural basis for cooperative binding of Ribbon-Helix-Helix Omega repressor to direct DNA heptad repeats

Results of the assignment of 66 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2bnw_E_DG1_DA2	A-B	AB01	52	0.25	AB01
02	2bnw_E_DA2_DA3	BBB	BB01	81	0.19	BB01
03	2bnw_E_DA3_DT4	BBB	BB01	86	0.19	BB01
04	2bnw_E_DT4_DC5	BBB	BB00	58	0.27	BB00
05	2bnw_E_DC5_DA6	miB	BB15	14	0.48	BB15
06	2bnw_E_DA6_DC7	B12	BB04	21	0.28	BB04
07	2bnw_E_DC7_DA8	B12	BB04	29	0.19	BB04
08	2bnw_E_DA8_DA9	BBB	BB00	29	0.32	BB00
09	2bnw_E_DA9_DA10	BBB	BB01	85	0.15	BB01
10	2bnw_E_DA10_DT11	BBB	BB01	65	0.28	BB01
11	2bnw_E_DT11_DC12	BBB	BB00	67	0.23	BB00
12	2bnw_E_DC12_DA13	BBB	BB00	69	0.35	BB00
13	2bnw_E_DA13_DC14	BB2	BB07	65	0.28	BB07
14	2bnw_E_DC14_DA15	NAN	NANT	0	0.36	BB15
15	2bnw_E_DA15_DA16	BBB	BB00	50	0.15	BB00
16	2bnw_E_DA16_DG17	B-A	BA08	10	0.41	BA08
17	2bnw_F_DC19_DT20	NAN	NANT	0	0.41	BB16
18	2bnw_F_DT20_DT21	BBB	BB00	88	0.15	BB00
19	2bnw_F_DT21_DG22	BBB	BB00	65	0.25	BB00
20	2bnw_F_DG22_DT23	BBB	BB00	99	0.12	BB00
21	2bnw_F_DT23_DG24	B12	BB04	55	0.35	BB04
22	2bnw_F_DG24_DA25	BBB	BB00	90	0.20	BB00
23	2bnw_F_DA25_DT26	B-A	BA05	80	0.18	BA05
24	2bnw_F_DT26_DT27	BBB	BB01	57	0.33	BB01
25	2bnw_F_DT27_DT28	BBB	BB01	73	0.18	BB01
26	2bnw_F_DT28_DG29	BBB	BB00	66	0.24	BB00
27	2bnw_F_DG29_DT30	BBB	BB00	88	0.17	BB00
28	2bnw_F_DT30_DG31	BB2	BB07	77	0.36	BB07
29	2bnw_F_DG31_DA32	BBB	BB00	63	0.20	BB00
30	2bnw_F_DA32_DT33	B-A	BA05	82	0.20	BA05
31	2bnw_F_DT33_DT34	BBB	BB01	57	0.26	BB01
32	2bnw_F_DT34_DC35	BBB	BB00	65	0.31	BB00
33	2bnw_F_DC35_DG36	NAN	NANT	0	0.48	BB04
34	2bnw_G_DG1_DA2	BB2	BB07	53	0.55	BB07
35	2bnw_G_DA2_DA3	BBB	BB00	67	0.23	BB00
36	2bnw_G_DA3_DT4	BBB	BB00	84	0.17	BB00
37	2bnw_G_DT4_DC5	NAN	NANT	0	0.54	AB02
38	2bnw_G_DC5_DA6	NAN	NANT	0	0.52	BB17
39	2bnw_G_DA6_DC7	NAN	NANT	0	0.51	BB07
40	2bnw_G_DC7_DA8	BB2	BB07	21	0.19	BB07
41	2bnw_G_DA8_DA9	BB2	BB07	42	0.35	BB07
42	2bnw_G_DA9_DA10	NAN	NANT	0	0.52	BB08
43	2bnw_G_DA10_DT11	BBw	BB16	62	0.52	BB16
44	2bnw_G_DT11_DC12	BBB	BB01	82	0.19	BB01
45	2bnw_G_DC12_DA13	NAN	NANT	0	0.30	BB10
46	2bnw_G_DA13_DC14	B-A	BA17	62	0.34	BA17
47	2bnw_G_DC14_DA15	miB	BB14	65	0.29	BB14
48	2bnw_G_DA15_DA16	miB	BB14	20	0.47	BB14
49	2bnw_G_DA16_DG17	NAN	NANT	0	0.58	AB02
50	2bnw_H_DC19_DT20	NAN	NANT	0	0.58	BB10
51	2bnw_H_DT20_DT21	miB	BB14	44	0.47	BB14
52	2bnw_H_DT21_DG22	B12	BB04	66	0.33	BB04
53	2bnw_H_DG22_DT23	BBB	BB00	88	0.25	BB00
54	2bnw_H_DT23_DG24	miB	BB10	48	0.23	BB10
55	2bnw_H_DG24_DA25	miB	BB14	89	0.27	BB14
56	2bnw_H_DA25_DT26	BBw	BB11	62	0.26	BB11
57	2bnw_H_DT26_DT27	NAN	NANT	0	0.37	BB10
58	2bnw_H_DT27_DT28	miB	BB14	81	0.29	BB14
59	2bnw_H_DT28_DG29	miB	BB10	64	0.29	BB10
60	2bnw_H_DG29_DT30	NAN	NANT	0	0.37	BB17
61	2bnw_H_DT30_DG31	NAN	NANT	0	0.49	AB02
62	2bnw_H_DG31_DA32	BBB	BB00	65	0.21	BB00
63	2bnw_H_DA32_DT33	BBB	BB00	85	0.16	BB00
64	2bnw_H_DT33_DT34	miB	BB10	46	0.39	BB10
65	2bnw_H_DT34_DC35	BBB	BB00	29	0.38	BB00
66	2bnw_H_DC35_DG36	NAN	NANT	0	0.53	BB04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

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Results of the assignment of 66 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

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Definitions

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