DNATCO v4.1: results

Structure of the Smaug Recognition RNA Element

Results of the assignment of 180 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	2b7g-m10_A_G1_G2	AAA	AA00	93	0.15	AA00
002	2b7g-m1_A_G1_G2	AAA	AA00	91	0.17	AA00
003	2b7g-m2_A_G1_G2	AAA	AA00	92	0.17	AA00
004	2b7g-m3_A_G1_G2	AAA	AA00	94	0.16	AA00
005	2b7g-m4_A_G1_G2	AAA	AA00	93	0.17	AA00
006	2b7g-m5_A_G1_G2	AAA	AA00	91	0.18	AA00
007	2b7g-m6_A_G1_G2	AAA	AA00	94	0.17	AA00
008	2b7g-m7_A_G1_G2	AAA	AA00	94	0.17	AA00
009	2b7g-m8_A_G1_G2	AAA	AA00	92	0.16	AA00
010	2b7g-m9_A_G1_G2	AAA	AA00	92	0.18	AA00
011	2b7g-m10_A_G2_A3	AAA	AA00	98	0.16	AA00
012	2b7g-m1_A_G2_A3	AAA	AA00	98	0.18	AA00
013	2b7g-m2_A_G2_A3	AAA	AA00	97	0.17	AA00
014	2b7g-m3_A_G2_A3	AAA	AA00	95	0.17	AA00
015	2b7g-m4_A_G2_A3	AAA	AA00	98	0.17	AA00
016	2b7g-m5_A_G2_A3	AAA	AA00	97	0.17	AA00
017	2b7g-m6_A_G2_A3	AAA	AA00	98	0.17	AA00
018	2b7g-m7_A_G2_A3	AAA	AA00	97	0.17	AA00
019	2b7g-m8_A_G2_A3	AAA	AA00	98	0.17	AA00
020	2b7g-m9_A_G2_A3	AAA	AA00	97	0.17	AA00
021	2b7g-m10_A_A3_G4	AAA	AA00	97	0.14	AA00
022	2b7g-m1_A_A3_G4	AAA	AA00	96	0.16	AA00
023	2b7g-m2_A_A3_G4	AAA	AA00	96	0.15	AA00
024	2b7g-m3_A_A3_G4	AAA	AA00	95	0.14	AA00
025	2b7g-m4_A_A3_G4	AAA	AA00	96	0.15	AA00
026	2b7g-m5_A_A3_G4	AAA	AA00	97	0.14	AA00
027	2b7g-m6_A_A3_G4	AAA	AA00	96	0.15	AA00
028	2b7g-m7_A_A3_G4	AAA	AA00	95	0.15	AA00
029	2b7g-m8_A_A3_G4	AAA	AA00	96	0.14	AA00
030	2b7g-m9_A_A3_G4	AAA	AA00	94	0.16	AA00
031	2b7g-m10_A_G4_G5	AAA	AA00	99	0.16	AA00
032	2b7g-m1_A_G4_G5	AAA	AA00	99	0.17	AA00
033	2b7g-m2_A_G4_G5	AAA	AA00	99	0.17	AA00
034	2b7g-m3_A_G4_G5	AAA	AA00	99	0.15	AA00
035	2b7g-m4_A_G4_G5	AAA	AA00	99	0.16	AA00
036	2b7g-m5_A_G4_G5	AAA	AA00	99	0.17	AA00
037	2b7g-m6_A_G4_G5	AAA	AA00	99	0.16	AA00
038	2b7g-m7_A_G4_G5	AAA	AA00	99	0.15	AA00
039	2b7g-m8_A_G4_G5	AAA	AA00	99	0.15	AA00
040	2b7g-m9_A_G4_G5	AAA	AA00	99	0.16	AA00
041	2b7g-m10_A_G5_C6	AAA	AA00	99	0.14	AA00
042	2b7g-m1_A_G5_C6	AAA	AA00	99	0.14	AA00
043	2b7g-m2_A_G5_C6	AAA	AA00	99	0.14	AA00
044	2b7g-m3_A_G5_C6	AAA	AA00	99	0.13	AA00
045	2b7g-m4_A_G5_C6	AAA	AA00	99	0.13	AA00
046	2b7g-m5_A_G5_C6	AAA	AA00	99	0.14	AA00
047	2b7g-m6_A_G5_C6	AAA	AA00	99	0.14	AA00
048	2b7g-m7_A_G5_C6	AAA	AA00	99	0.12	AA00
049	2b7g-m8_A_G5_C6	AAA	AA00	99	0.13	AA00
050	2b7g-m9_A_G5_C6	AAA	AA00	99	0.14	AA00
051	2b7g-m10_A_C6_U7	AAA	AA00	95	0.21	AA00
052	2b7g-m1_A_C6_U7	AAA	AA00	96	0.20	AA00
053	2b7g-m2_A_C6_U7	AAA	AA00	95	0.21	AA00
054	2b7g-m3_A_C6_U7	AAA	AA00	97	0.19	AA00
055	2b7g-m4_A_C6_U7	AAA	AA00	97	0.21	AA00
056	2b7g-m5_A_C6_U7	AAA	AA00	96	0.20	AA00
057	2b7g-m6_A_C6_U7	AAA	AA00	98	0.23	AA00
058	2b7g-m7_A_C6_U7	AAA	AA00	97	0.18	AA00
059	2b7g-m8_A_C6_U7	AAA	AA00	98	0.20	AA00
060	2b7g-m9_A_C6_U7	AAA	AA00	97	0.21	AA00
061	2b7g-m10_A_U7_C8	NAN	NANT	0	0.42	AB04
062	2b7g-m1_A_U7_C8	NAN	NANT	0	0.42	AB04
063	2b7g-m2_A_U7_C8	AAA	AA00	72	0.32	AA00
064	2b7g-m3_A_U7_C8	AAA	AA00	77	0.31	AA00
065	2b7g-m4_A_U7_C8	AAw	AA01	23	0.46	AA01
066	2b7g-m5_A_U7_C8	NAN	NANT	0	0.43	AB04
067	2b7g-m6_A_U7_C8	AAw	AA01	14	0.50	AA01
068	2b7g-m7_A_U7_C8	AAA	AA00	83	0.29	AA00
069	2b7g-m8_A_U7_C8	A-B	AB01	43	0.28	AB01
070	2b7g-m9_A_U7_C8	A-B	AB01	20	0.29	AB01
071	2b7g-m10_A_C8_U9	NAN	NANT	0	0.87	OP09
072	2b7g-m1_A_C8_U9	NAN	NANT	0	0.86	OP09
073	2b7g-m2_A_C8_U9	NAN	NANT	0	0.73	OP09
074	2b7g-m3_A_C8_U9	NAN	NANT	0	0.60	OP04
075	2b7g-m4_A_C8_U9	NAN	NANT	0	0.63	OP04
076	2b7g-m5_A_C8_U9	NAN	NANT	0	0.83	OP09
077	2b7g-m6_A_C8_U9	NAN	NANT	0	0.68	OP04
078	2b7g-m7_A_C8_U9	NAN	NANT	0	0.65	OP04
079	2b7g-m8_A_C8_U9	NAN	NANT	0	0.95	OP04
080	2b7g-m9_A_C8_U9	NAN	NANT	0	0.92	OP04
081	2b7g-m10_A_U9_G10	NAN	NANT	0	0.65	OP20
082	2b7g-m1_A_U9_G10	NAN	NANT	0	0.54	OP20
083	2b7g-m2_A_U9_G10	NAN	NANT	0	0.68	OP20
084	2b7g-m3_A_U9_G10	NAN	NANT	0	0.51	OP20
085	2b7g-m4_A_U9_G10	NAN	NANT	0	0.53	OP20
086	2b7g-m5_A_U9_G10	NAN	NANT	0	0.59	OP20
087	2b7g-m6_A_U9_G10	NAN	NANT	0	0.69	OP20
088	2b7g-m7_A_U9_G10	NAN	NANT	0	0.50	OP20
089	2b7g-m8_A_U9_G10	NAN	NANT	0	0.65	OP12
090	2b7g-m9_A_U9_G10	NAN	NANT	0	0.67	OP12
091	2b7g-m10_A_G10_G11	NAN	NANT	0	0.40	ZZ02
092	2b7g-m1_A_G10_G11	NAN	NANT	0	0.48	ZZ02
093	2b7g-m2_A_G10_G11	NAN	NANT	0	0.76	OP22
094	2b7g-m3_A_G10_G11	NAN	NANT	0	0.51	ZZ02
095	2b7g-m4_A_G10_G11	NAN	NANT	0	0.50	ZZ02
096	2b7g-m5_A_G10_G11	NAN	NANT	0	0.44	ZZ02
097	2b7g-m6_A_G10_G11	NAN	NANT	0	0.87	OP22
098	2b7g-m7_A_G10_G11	NAN	NANT	0	0.53	ZZ02
099	2b7g-m8_A_G10_G11	NAN	NANT	0	0.40	ZZ02
100	2b7g-m9_A_G10_G11	NAN	NANT	0	0.40	ZZ02
101	2b7g-m10_A_G11_C12	NAN	NANT	0	0.40	OP09
102	2b7g-m1_A_G11_C12	NAN	NANT	0	0.54	OP09
103	2b7g-m2_A_G11_C12	NAN	NANT	0	0.68	OP09
104	2b7g-m3_A_G11_C12	NAN	NANT	0	0.47	OP09
105	2b7g-m4_A_G11_C12	NAN	NANT	0	0.52	OP09
106	2b7g-m5_A_G11_C12	NAN	NANT	0	0.40	OP09
107	2b7g-m6_A_G11_C12	NAN	NANT	0	0.62	OP09
108	2b7g-m7_A_G11_C12	NAN	NANT	0	0.42	OP09
109	2b7g-m8_A_G11_C12	NAN	NANT	0	0.43	OP09
110	2b7g-m9_A_G11_C12	NAN	NANT	0	0.42	OP09
111	2b7g-m10_A_C12_A13	OPN	OP11	55	0.57	OP11
112	2b7g-m1_A_C12_A13	OPN	OP11	47	0.74	OP11
113	2b7g-m2_A_C12_A13	NAN	NANT	0	1.01	OP12
114	2b7g-m3_A_C12_A13	OPN	OP11	56	0.59	OP11
115	2b7g-m4_A_C12_A13	OPN	OP11	49	0.75	OP11
116	2b7g-m5_A_C12_A13	OPN	OP11	58	0.53	OP11
117	2b7g-m6_A_C12_A13	NAN	NANT	0	0.86	OP12
118	2b7g-m7_A_C12_A13	OPN	OP11	54	0.55	OP11
119	2b7g-m8_A_C12_A13	OPN	OP11	54	0.54	OP11
120	2b7g-m9_A_C12_A13	OPN	OP11	54	0.61	OP11
121	2b7g-m10_A_A13_G14	AAA	AA00	99	0.10	AA00
122	2b7g-m1_A_A13_G14	AAA	AA00	99	0.10	AA00
123	2b7g-m2_A_A13_G14	AAA	AA00	98	0.11	AA00
124	2b7g-m3_A_A13_G14	AAA	AA00	99	0.11	AA00
125	2b7g-m4_A_A13_G14	AAA	AA00	97	0.11	AA00
126	2b7g-m5_A_A13_G14	AAA	AA00	99	0.10	AA00
127	2b7g-m6_A_A13_G14	AAA	AA00	98	0.12	AA00
128	2b7g-m7_A_A13_G14	AAA	AA00	99	0.11	AA00
129	2b7g-m8_A_A13_G14	AAA	AA00	98	0.11	AA00
130	2b7g-m9_A_A13_G14	AAA	AA00	99	0.10	AA00
131	2b7g-m10_A_G14_C15	AAA	AA00	99	0.16	AA00
132	2b7g-m1_A_G14_C15	AAA	AA00	99	0.15	AA00
133	2b7g-m2_A_G14_C15	AAA	AA00	99	0.12	AA00
134	2b7g-m3_A_G14_C15	AAA	AA00	99	0.15	AA00
135	2b7g-m4_A_G14_C15	AAA	AA00	98	0.16	AA00
136	2b7g-m5_A_G14_C15	AAA	AA00	98	0.16	AA00
137	2b7g-m6_A_G14_C15	AAA	AA00	99	0.15	AA00
138	2b7g-m7_A_G14_C15	AAA	AA00	99	0.16	AA00
139	2b7g-m8_A_G14_C15	AAA	AA00	99	0.15	AA00
140	2b7g-m9_A_G14_C15	AAA	AA00	99	0.14	AA00
141	2b7g-m10_A_C15_U16	AAA	AA00	92	0.23	AA00
142	2b7g-m1_A_C15_U16	AAA	AA00	94	0.23	AA00
143	2b7g-m2_A_C15_U16	AAA	AA00	95	0.20	AA00
144	2b7g-m3_A_C15_U16	AAA	AA00	94	0.21	AA00
145	2b7g-m4_A_C15_U16	AAA	AA00	93	0.24	AA00
146	2b7g-m5_A_C15_U16	AAA	AA00	93	0.24	AA00
147	2b7g-m6_A_C15_U16	AAA	AA00	93	0.24	AA00
148	2b7g-m7_A_C15_U16	AAA	AA00	93	0.23	AA00
149	2b7g-m8_A_C15_U16	AAA	AA00	93	0.23	AA00
150	2b7g-m9_A_C15_U16	AAA	AA00	93	0.23	AA00
151	2b7g-m10_A_U16_U17	AAA	AA00	97	0.16	AA00
152	2b7g-m1_A_U16_U17	AAA	AA00	97	0.16	AA00
153	2b7g-m2_A_U16_U17	AAA	AA00	98	0.14	AA00
154	2b7g-m3_A_U16_U17	AAA	AA00	98	0.14	AA00
155	2b7g-m4_A_U16_U17	AAA	AA00	97	0.15	AA00
156	2b7g-m5_A_U16_U17	AAA	AA00	96	0.16	AA00
157	2b7g-m6_A_U16_U17	AAA	AA00	97	0.16	AA00
158	2b7g-m7_A_U16_U17	AAA	AA00	97	0.15	AA00
159	2b7g-m8_A_U16_U17	AAA	AA00	97	0.15	AA00
160	2b7g-m9_A_U16_U17	AAA	AA00	96	0.16	AA00
161	2b7g-m10_A_U17_U18	AAA	AA00	95	0.20	AA00
162	2b7g-m1_A_U17_U18	AAA	AA00	94	0.22	AA00
163	2b7g-m2_A_U17_U18	AAA	AA00	95	0.19	AA00
164	2b7g-m3_A_U17_U18	AAA	AA00	93	0.20	AA00
165	2b7g-m4_A_U17_U18	AAA	AA00	95	0.20	AA00
166	2b7g-m5_A_U17_U18	AAA	AA00	94	0.20	AA00
167	2b7g-m6_A_U17_U18	AAA	AA00	94	0.20	AA00
168	2b7g-m7_A_U17_U18	AAA	AA00	95	0.20	AA00
169	2b7g-m8_A_U17_U18	AAA	AA00	95	0.19	AA00
170	2b7g-m9_A_U17_U18	AAA	AA00	94	0.20	AA00
171	2b7g-m10_A_U18_C19	AAA	AA00	81	0.19	AA00
172	2b7g-m1_A_U18_C19	AAA	AA00	77	0.23	AA00
173	2b7g-m2_A_U18_C19	AAA	AA00	72	0.22	AA00
174	2b7g-m3_A_U18_C19	AAA	AA00	75	0.21	AA00
175	2b7g-m4_A_U18_C19	AAA	AA00	76	0.22	AA00
176	2b7g-m5_A_U18_C19	AAA	AA00	76	0.21	AA00
177	2b7g-m6_A_U18_C19	AAA	AA00	81	0.21	AA00
178	2b7g-m7_A_U18_C19	AAA	AA00	75	0.21	AA00
179	2b7g-m8_A_U18_C19	AAA	AA00	77	0.20	AA00
180	2b7g-m9_A_U18_C19	AAA	AA00	77	0.22	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Browse conformers

Show

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

Results of the assignment of 180 detected steps in 10 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible