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Conformers: ABBIImiBZICOPNSYNN
Click the Summary/Torsions/Similar/... tabs for more details.
Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.

Results of the assignment of 80 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.
Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.
step numberStep nameCANANtCconfalrmsd
012as5_A_DT4001_DT4002BBwBB16460.45 BB16
022as5_A_DT4002_DA4003BBBBB00260.40 BB00
032as5_A_DA4003_DG4004BBwBB02830.20 BB02
042as5_A_DG4004_DG4005BBBBB00570.27 BB00
052as5_A_DG4005_DA4006BBBBB00760.20 BB00
062as5_A_DA4006_DA4007BB2BB07740.27 BB07
072as5_A_DA4007_DA4008BBwBB02620.20 BB02
082as5_A_DA4008_DA4009BBwBB02520.26 BB02
092as5_A_DA4009_DT4010BBBBB00810.23 BB00
102as5_A_DT4010_DT4011BBwBB02510.25 BB02
112as5_A_DT4011_DT4012BBBBB00850.20 BB00
122as5_A_DT4012_DG4013BBwBB02860.15 BB02
132as5_A_DG4013_DT4014BBwBB02760.18 BB02
142as5_A_DT4014_DT4015BBwBB02610.28 BB02
152as5_A_DT4015_DT4016BBwBB02710.25 BB02
162as5_A_DT4016_DC4017BBwBB02500.33 BB02
172as5_A_DC4017_DA4018BBwBB02600.33 BB02
182as5_A_DA4018_DT4019BBBBB00780.22 BB00
192as5_A_DT4019_DA4020BBBBB00690.31 BB00
202as5_A_DA4020_DG4021BBwBB02580.23 BB02
212as5_B_DA5001_DA5002BBBBB00790.18 BB00
222as5_B_DA5002_DC5003BBwBB02800.27 BB02
232as5_B_DC5003_DT5004BBwBB02590.39 BB02
242as5_B_DT5004_DA5005BBBBB00610.30 BB00
252as5_B_DA5005_DT5006BBwBB02660.15 BB02
262as5_B_DT5006_DG5007BBwBB02870.22 BB02
272as5_B_DG5007_DA5008BBBBB00660.23 BB00
282as5_B_DA5008_DA5009BBwBB02890.17 BB02
292as5_B_DA5009_DA5010BBBBB00820.28 BB00
302as5_B_DA5010_DC5011BBwBB02920.17 BB02
312as5_B_DC5011_DA5012BBBBB00870.16 BB00
322as5_B_DA5012_DA5013BBBBB00910.17 BB00
332as5_B_DA5013_DA5014BBBBB00690.29 BB00
342as5_B_DA5014_DT5015BBwBB02920.08 BB02
352as5_B_DT5015_DT5016BBBBB00880.23 BB00
362as5_B_DT5016_DT5017BBwBB02900.14 BB02
372as5_B_DT5017_DT5018BBBBB00670.23 BB00
382as5_B_DT5018_DC5019BBwBB02870.23 BB02
392as5_B_DC5019_DC5020BBwBB02580.24 BB02
402as5_B_DC5020_DT5021BBwBB02490.33 BB02
412as5_C_DT4001_DT4002BBwBB16500.46 BB16
422as5_C_DT4002_DA4003BBBBB00290.39 BB00
432as5_C_DA4003_DG4004BBwBB02890.20 BB02
442as5_C_DG4004_DG4005BBBBB00580.27 BB00
452as5_C_DG4005_DA4006BBBBB00750.21 BB00
462as5_C_DA4006_DA4007BB2BB07740.25 BB07
472as5_C_DA4007_DA4008BBwBB02630.21 BB02
482as5_C_DA4008_DA4009BBwBB02600.23 BB02
492as5_C_DA4009_DT4010BBBBB00810.24 BB00
502as5_C_DT4010_DT4011BBwBB02710.20 BB02
512as5_C_DT4011_DT4012BBBBB00800.22 BB00
522as5_C_DT4012_DG4013BBwBB02860.17 BB02
532as5_C_DG4013_DT4014BBwBB02780.17 BB02
542as5_C_DT4014_DT4015BBwBB02630.25 BB02
552as5_C_DT4015_DT4016BBwBB02640.26 BB02
562as5_C_DT4016_DC4017BBwBB02470.34 BB02
572as5_C_DC4017_DA4018BBwBB02620.33 BB02
582as5_C_DA4018_DT4019BBBBB00770.23 BB00
592as5_C_DT4019_DA4020BBBBB00690.29 BB00
602as5_C_DA4020_DG4021BBwBB02480.22 BB02
612as5_D_DA5001_DA5002BBBBB00790.19 BB00
622as5_D_DA5002_DC5003BBwBB02770.29 BB02
632as5_D_DC5003_DT5004BBwBB02530.40 BB02
642as5_D_DT5004_DA5005BBBBB00480.30 BB00
652as5_D_DA5005_DT5006BBwBB02680.17 BB02
662as5_D_DT5006_DG5007BBwBB02840.24 BB02
672as5_D_DG5007_DA5008BBBBB00710.21 BB00
682as5_D_DA5008_DA5009BBwBB02910.14 BB02
692as5_D_DA5009_DA5010BBBBB00750.31 BB00
702as5_D_DA5010_DC5011BBwBB02900.17 BB02
712as5_D_DC5011_DA5012BBBBB00860.17 BB00
722as5_D_DA5012_DA5013BBBBB00940.18 BB00
732as5_D_DA5013_DA5014BBBBB00700.27 BB00
742as5_D_DA5014_DT5015BBwBB02950.07 BB02
752as5_D_DT5015_DT5016BBBBB00710.23 BB00
762as5_D_DT5016_DT5017BBwBB02840.16 BB02
772as5_D_DT5017_DT5018BBBBB00610.24 BB00
782as5_D_DT5018_DC5019BBwBB02880.25 BB02
792as5_D_DC5019_DC5020BBwBB02760.25 BB02
802as5_D_DC5020_DT5021BBwBB02520.30 BB02

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.
Definition of torsion angles
step:
Table of conformers

δ1ε1ζ1α2β2γ2δ2χ1χ2μNNCC
step_torsions
ntC_average
Δ torsions
torsion scores

commentsstep confal = NaN
cartesian RMSD = NaN Å
pseudorotation: NA
details: NA
Similarity of step to class averages

Download

Results as csv or json file.
Best NtC fitted to input structure.

Restraints

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Definitions

Average parameters (csv), esd values (csv), and Cartesian coordinates of conformers.

Download the papers

Description of DNATCO server:
Černý et al., Nucleic Acids Research, 44, W284 (2016).
Definition of conformers:
Schneider et al., Acta Cryst D, 74, 52-64 (2018).
Example of application:
Schneider et al., Genes, 8(10), 278, (2017).

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