DNATCO v4.1: results

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Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2ann_B_C3_G4	AAA	AA00	68	0.21	AA00
02	2ann_B_G4_C5	AAA	AA00	83	0.08	AA00
03	2ann_B_C5_G6	AAA	AA08	49	0.48	AA08
04	2ann_B_G6_G7	A-B	AB05	71	0.32	AB05
05	2ann_B_G7_A8	OPN	OP10	69	0.27	OP10
06	2ann_B_A8_U9	AAA	AA08	52	0.37	AA08
07	2ann_B_U9_C10	AAA	AA00	69	0.31	AA00
08	2ann_B_C10_A11	AAA	AA08	54	0.46	AA08
09	2ann_B_A11_G12	ICL	IC01	71	0.48	IC01
10	2ann_B_G12_U13	NAN	NANT	0	1.15	OP18
11	2ann_B_U13_C14	OPN	OP20	39	0.69	OP20
12	2ann_B_C14_A15	NAN	NANT	0	0.43	OP22
13	2ann_B_A15_C16	AAA	AA00	74	0.27	AA00
14	2ann_B_C16_C17	AAA	AA00	60	0.39	AA00
15	2ann_B_C17_C18	AAA	AA00	64	0.35	AA00
16	2ann_B_C18_A19	AAu	AA12	56	0.45	AA12
17	2ann_B_A19_A20	AAA	AA00	62	0.27	AA00
18	2ann_B_A20_G21	AAA	AA08	62	0.46	AA08
19	2ann_B_G21_C22	AAA	AA00	89	0.15	AA00
20	2ann_B_C22_G23	AAw	AA01	69	0.24	AA01
21	2ann_B_G23_C24	AAA	AA00	64	0.20	AA00
22	2ann_B_C24_G25	AAA	AA00	71	0.26	AA00

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Restraints file for REFMAC (steps with RMSD <= 0.5Å)
Commands file for MMB (steps with RMSD <= 0.5Å)
Restraints file for Phenix (steps with RMSD <= 0.5Å) [?]

Color by conformation group (pyramids)

Color by NtC (balls)

A

A-B

B-A

B

IC

OPN

Z

N

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