DNATCO v4.1: results

Structure of replicative DNA polymerase provides insigts into the mechanisms for processivity, frameshifting and editing

Results of the assignment of 81 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
01	2ajq_P_DA804_DA805	BBB	BB00	60	0.36	BB00
02	2ajq_P_DA805_DA806	NAN	NANT	0	0.64	BB02
03	2ajq_P_DA806_DC807	NAN	NANT	0	0.85	BB17
04	2ajq_P_DC807_DG808	BBw	BB02	55	0.41	BB02
05	2ajq_P_DG808_DA809	B12	BB04	81	0.24	BB04
06	2ajq_P_DA809_DC810	BBB	BB00	75	0.36	BB00
07	2ajq_P_DC810_DG811	BBB	BB00	94	0.17	BB00
08	2ajq_P_DG811_DG812	B12	BB04	84	0.27	BB04
09	2ajq_P_DG812_DC813	BBw	BB02	74	0.27	BB02
10	2ajq_P_DC813_DC814	BBB	BB00	45	0.37	BB00
11	2ajq_P_DC814_DA815	B12	BB04	72	0.21	BB04
12	2ajq_P_DA815_DG816	BBB	BB00	68	0.15	BB00
13	2ajq_P_DG816_DT817	BBw	BB02	79	0.15	BB02
14	2ajq_P_DT817_DG818	BBw	BB02	63	0.31	BB02
15	2ajq_P_DG818_DC819	BBB	BB00	62	0.28	BB00
16	2ajq_P_DC819_DC820	BBB	BB00	48	0.38	BB00
17	2ajq_P_DC820_DA821	BBw	BB02	50	0.43	BB02
18	2ajq_T_DT852_DG853	NAN	NANT	0	0.96	OP22
19	2ajq_T_DG853_DG854	NAN	NANT	0	1.44	OP13
20	2ajq_T_DG854_DA855	BBB	BB00	54	0.41	BB00
21	2ajq_T_DA855_DT856	BBB	BB00	53	0.31	BB00
22	2ajq_T_DT856_DG857	BBw	BB02	58	0.24	BB02
23	2ajq_T_DG857_DG858	BBB	BB00	53	0.35	BB00
24	2ajq_T_DG858_DC859	BBw	BB02	81	0.20	BB02
25	2ajq_T_DC859_DA860	B12	BB04	51	0.22	BB04
26	2ajq_T_DA860_DC861	BBw	BB02	83	0.27	BB02
27	2ajq_T_DC861_DT862	BBB	BB00	76	0.23	BB00
28	2ajq_T_DT862_DG863	BBB	BB00	63	0.24	BB00
29	2ajq_T_DG863_DG864	BB2	BB07	31	0.35	BB07
30	2ajq_T_DG864_DC865	BBB	BB00	27	0.36	BB00
31	2ajq_T_DC865_DC866	miB	BB13	84	0.19	BB13
32	2ajq_T_DC866_DG867	NAN	NANT	0	0.56	BB13
33	2ajq_T_DG867_DT868	NAN	NANT	0	0.50	BB02
34	2ajq_T_DT868_DC869	BBw	BB02	83	0.17	BB02
35	2ajq_T_DC869_DG870	BBB	BB00	59	0.33	BB00
36	2ajq_T_DG870_DT871	BBB	BB00	85	0.23	BB00
37	2ajq_T_DT871_DT872	B12	BB04	64	0.31	BB04
38	2ajq_T_DT872_DT873	B12	BB04	58	0.36	BB04
39	2ajq_X_DG902_DA903	BBw	BB16	57	0.61	BB16
40	2ajq_X_DA903_DA904	NAN	NANT	0	0.67	BB11
41	2ajq_X_DA904_DA905	BBB	BB00	81	0.35	BB00
42	2ajq_X_DA905_DA906	BBB	BB00	84	0.23	BB00
43	2ajq_X_DA906_DC907	BBB	BB00	80	0.21	BB00
44	2ajq_X_DC907_DG908	BBB	BB00	18	0.55	BB00
45	2ajq_X_DG908_DA909	BB2	BB07	29	0.39	BB07
46	2ajq_X_DA909_DC910	BBB	BB00	76	0.32	BB00
47	2ajq_X_DC910_DG911	BBw	BB02	88	0.18	BB02
48	2ajq_X_DG911_DG912	BBB	BB00	87	0.20	BB00
49	2ajq_X_DG912_DC913	BBB	BB00	98	0.13	BB00
50	2ajq_X_DC913_DC914	BBB	BB00	91	0.17	BB00
51	2ajq_X_DC914_DA915	BB2	BB07	63	0.26	BB07
52	2ajq_X_DA915_DG916	BBw	BB02	85	0.15	BB02
53	2ajq_X_DG916_DT917	BBw	BB02	52	0.27	BB02
54	2ajq_X_DT917_DG918	BBw	BB02	48	0.30	BB02
55	2ajq_X_DG918_DC919	B12	BB04	67	0.23	BB04
56	2ajq_X_DC919_DC920	BBB	BB00	42	0.43	BB00
57	2ajq_X_DC920_DA921	NAN	NANT	0	0.45	BB02
58	2ajq_Z_DT952_DG953	NAN	NANT	0	0.92	OP22
59	2ajq_Z_DG953_DG954	NAN	NANT	0	1.86	OP09
60	2ajq_Z_DG954_DA955	BBB	BB00	38	0.48	BB00
61	2ajq_Z_DA955_DT956	BBB	BB01	34	0.32	BB01
62	2ajq_Z_DT956_DG957	NAN	NANT	0	0.43	BA10
63	2ajq_Z_DG957_DG958	NAN	NANT	0	0.63	BB16
64	2ajq_Z_DG958_DC959	BBB	BB00	89	0.24	BB00
65	2ajq_Z_DC959_DA960	B12	BB04	85	0.19	BB04
66	2ajq_Z_DA960_DC961	BBw	BB02	83	0.29	BB02
67	2ajq_Z_DC961_DT962	BBB	BB00	91	0.21	BB00
68	2ajq_Z_DT962_DG963	BBB	BB00	88	0.29	BB00
69	2ajq_Z_DG963_DG964	BB2	BB07	32	0.29	BB07
70	2ajq_Z_DG964_DC965	BBB	BB00	81	0.25	BB00
71	2ajq_Z_DC965_DC966	BBw	BB03	90	0.15	BB03
72	2ajq_Z_DC966_DG967	B12	BB04	58	0.35	BB04
73	2ajq_Z_DG967_DT968	BBB	BB00	80	0.23	BB00
74	2ajq_Z_DT968_DC969	BBB	BB00	79	0.20	BB00
75	2ajq_Z_DC969_DG970	B12	BB04	82	0.23	BB04
76	2ajq_Z_DG970_DT971	BBB	BB00	69	0.30	BB00
77	2ajq_Z_DT971_DT972	B12	BB04	86	0.18	BB04
78	2ajq_Z_DT972_DT973	BBB	BB00	92	0.15	BB00
79	2ajq_Z_DT973_DT974	BBB	BB00	80	0.31	BB00
80	2ajq_Z_DT974_DC975	B12	BB04	69	0.36	BB04
81	2ajq_Z_DC975_DG976	B12	BB04	12	0.51	BB04

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

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Z

N

Results of the assignment of 81 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

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Restraints

User-based restraints

Definitions

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