DNATCO v4.1: results

Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands.

Results of the assignment of 219 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Click a row in table or a step in viewer for analysis of results. Click column headers to sort data.

Define restraints for steps within Å cartesian RMSD, global sigma scaling factor or use per step sigma scaling.

step number	Step name	CANA	NtC	confal	rmsd	NtCs
001	1zzn_B_GTP1_G5	NAN	NANT	0	0.81	BB11
002	1zzn_B_G5_C6	AAA	AA04	26	0.53	AA04
003	1zzn_B_C6_C7	AAw	AA01	81	0.18	AA01
004	1zzn_B_C7_G8	AAw	AA06	71	0.44	AA06
005	1zzn_B_G8_U9	AAA	AA00	32	0.23	AA00
006	1zzn_B_U9_G10	AAA	AA08	60	0.21	AA08
007	1zzn_B_G10_U11	AAA	AA00	47	0.23	AA00
008	1zzn_B_U11_G12	AAA	AA00	70	0.30	AA00
009	1zzn_B_G12_C13	AAA	AA00	66	0.39	AA00
010	1zzn_B_C13_C14	AAA	AA08	76	0.27	AA08
011	1zzn_B_C14_U15	AAA	AA00	73	0.17	AA00
012	1zzn_B_U15_U16	AAA	AA00	84	0.15	AA00
013	1zzn_B_U16_G17	AAA	AA00	76	0.18	AA00
014	1zzn_B_G17_C18	AAA	AA00	43	0.22	AA00
015	1zzn_B_C18_G19	AAA	AA00	50	0.26	AA00
016	1zzn_B_G19_C20	AAA	AA00	25	0.62	AA00
017	1zzn_B_C20_C21	NAN	NANT	0	1.20	AA13
018	1zzn_B_C21_G22	NAN	NANT	0	1.32	AA08
019	1zzn_B_G22_G23	AAu	AA12	35	0.48	AA12
020	1zzn_B_G23_G24	AAA	AA00	55	0.31	AA00
021	1zzn_B_G24_A25	OPN	OP03	15	0.36	OP03
022	1zzn_B_A25_A26	NAN	NANT	0	0.46	AA04
023	1zzn_B_A26_A27	AAA	AA00	28	0.32	AA00
024	1zzn_B_A27_C28	NAN	NANT	0	0.79	AA00
025	1zzn_B_C28_C29	AAA	AA00	51	0.23	AA00
026	1zzn_B_C29_A30	AAA	AA08	75	0.34	AA08
027	1zzn_B_A30_C31	AAA	AA00	55	0.24	AA00
028	1zzn_B_C31_G32	AAA	AA00	24	0.33	AA00
029	1zzn_B_G32_C33	AAA	AA08	54	0.37	AA08
030	1zzn_B_C33_A34	AAA	AA08	58	0.34	AA08
031	1zzn_B_A34_A35	AAA	AA08	60	0.29	AA08
032	1zzn_B_A35_G36	AAA	AA04	72	0.34	AA04
033	1zzn_B_G36_G37	AAw	AA06	31	0.48	AA06
034	1zzn_B_G37_G38	NAN	NANT	0	0.92	AA13
035	1zzn_B_G38_A39	AAA	AA00	68	0.29	AA00
036	1zzn_B_A39_U40	A-B	AB05	48	0.44	AB05
037	1zzn_B_U40_G41	NAN	NANT	0	1.31	OP16
038	1zzn_B_G41_G42	AAA	AA00	54	0.26	AA00
039	1zzn_B_G42_U43	AAA	AA00	59	0.22	AA00
040	1zzn_B_U43_G44	AAA	AA00	75	0.23	AA00
041	1zzn_B_G44_U45	AAA	AA00	59	0.22	AA00
042	1zzn_B_U45_C46	NAN	NANT	0	0.26	AA00
043	1zzn_B_C46_A47	A-B	AB01	14	0.43	AB01
044	1zzn_B_A47_A48	NAN	NANT	0	0.71	OP15
045	1zzn_B_A48_A49	AAA	AA08	43	0.38	AA08
046	1zzn_B_A49_U50	AAw	AA05	42	0.33	AA05
047	1zzn_B_U50_U51	NAN	NANT	0	0.66	OP01
048	1zzn_B_U51_C52	AAA	AA00	76	0.25	AA00
049	1zzn_B_C52_G53	AAw	AA10	63	0.29	AA10
050	1zzn_B_G53_G54	AAA	AA08	53	0.27	AA08
051	1zzn_B_G54_C55	AAA	AA00	32	0.36	AA00
052	1zzn_B_C55_G56	NAN	NANT	0	0.61	AA00
053	1zzn_B_G56_A57	AAA	AA00	62	0.26	AA00
054	1zzn_B_A57_A58	NAN	NANT	0	1.17	AA10
055	1zzn_B_A58_A59	AAA	AA08	47	0.45	AA08
056	1zzn_B_A59_C60	AAA	AA04	43	0.55	AA04
057	1zzn_B_C60_C61	AAA	AA00	17	0.41	AA00
058	1zzn_B_C61_U62	AAA	AA02	50	0.37	AA02
059	1zzn_B_U62_A63	NAN	NANT	0	0.50	AB05
060	1zzn_B_A63_A64	NAN	NANT	0	0.77	OP26
061	1zzn_B_A64_G65	NAN	NANT	0	0.64	AA08
062	1zzn_B_G65_C66	AAA	AA00	74	0.18	AA00
063	1zzn_B_C66_G67	AAA	AA00	87	0.14	AA00
064	1zzn_B_G67_C68	AAA	AA00	85	0.08	AA00
065	1zzn_B_C68_C69	AAA	AA00	83	0.17	AA00
066	1zzn_B_C69_C70	AAA	AA00	78	0.23	AA00
067	1zzn_B_C70_G71	NAN	NANT	0	2.30	OP01
068	1zzn_B_G71_C72	NAN	NANT	0	0.79	AB2S
069	1zzn_B_C72_C73	NAN	NANT	0	0.46	AA07
070	1zzn_B_C73_C74	NAN	NANT	0	0.71	AA04
071	1zzn_B_C74_G75	AAw	AA05	44	0.39	AA05
072	1zzn_B_G75_G76	AAw	AA11	82	0.32	AA11
073	1zzn_B_G76_G77	AAA	AA08	70	0.24	AA08
074	1zzn_B_G77_C78	AAA	AA00	55	0.23	AA00
075	1zzn_B_C78_G79	AAA	AA00	76	0.19	AA00
076	1zzn_B_G79_U80	AAA	AA08	50	0.36	AA08
077	1zzn_B_U80_A81	NAN	NANT	0	0.56	AB04
078	1zzn_B_A81_U82	NAN	NANT	0	1.20	BB07
079	1zzn_B_U82_G83	NAN	NANT	0	0.92	OP15
080	1zzn_B_G83_G84	AAA	AA00	28	0.46	AA00
081	1zzn_B_G84_C85	AAA	AA08	58	0.25	AA08
082	1zzn_B_C85_A86	AAA	AA08	58	0.45	AA08
083	1zzn_B_A86_A87	AAu	AA12	38	0.42	AA12
084	1zzn_B_A87_C88	NAN	NANT	0	0.33	AA05
085	1zzn_B_C88_G89	AAu	AA12	51	0.35	AA12
086	1zzn_B_G89_C90	AAw	AA10	67	0.30	AA10
087	1zzn_B_C90_C91	AAA	AA00	36	0.26	AA00
088	1zzn_B_C91_G92	AAA	AA00	68	0.16	AA00
089	1zzn_B_G92_A93	AAA	AA00	85	0.14	AA00
090	1zzn_B_A93_G94	AAA	AA00	73	0.21	AA00
091	1zzn_B_G94_C95	AAA	AA00	66	0.20	AA00
092	1zzn_B_C95_C96	AAA	AA00	50	0.26	AA00
093	1zzn_B_C96_A97	AAu	AA12	67	0.49	AA12
094	1zzn_B_A97_A98	AAA	AA08	68	0.46	AA08
095	1zzn_B_A98_G99	AAA	AA00	8	0.41	AA00
096	1zzn_B_G99_C100	AAw	AA01	56	0.29	AA01
097	1zzn_B_C100_U101	NAN	NANT	0	0.70	IC03
098	1zzn_B_U101_U102	AAA	AA00	37	0.35	AA00
099	1zzn_B_U102_C103	AAw	AA01	43	0.32	AA01
100	1zzn_B_C103_G104	AAw	AA11	51	0.38	AA11
101	1zzn_B_G104_C105	NAN	NANT	0	1.34	AA13
102	1zzn_B_C105_A106	NAN	NANT	0	1.38	OP24
103	1zzn_B_A106_G107	NAN	NANT	0	1.05	IC03
104	1zzn_B_G107_C1001	NAN	NANT	0	0.67	AA05
105	1zzn_B_C112_U113	NAN	NANT	0	0.79	AAS1
106	1zzn_B_U113_G114	AAA	AA00	84	0.16	AA00
107	1zzn_B_G114_C115	AAA	AA00	53	0.23	AA00
108	1zzn_B_C115_G116	AAA	AA00	83	0.13	AA00
109	1zzn_B_G116_A117	AAA	AA00	71	0.21	AA00
110	1zzn_B_A117_U118	AAw	AA05	52	0.39	AA05
111	1zzn_B_U118_G119	AAu	AA07	23	0.71	AA07
112	1zzn_B_G119_A120	AAA	AA08	78	0.26	AA08
113	1zzn_B_A120_A121	AAw	AA01	76	0.23	AA01
114	1zzn_B_A121_G122	AAA	AA08	39	0.49	AA08
115	1zzn_B_G122_G123	AAA	AA00	60	0.26	AA00
116	1zzn_B_G123_U124	AAA	AA00	64	0.32	AA00
117	1zzn_B_U124_G125	AAA	AA04	18	0.65	AA04
118	1zzn_B_G125_U126	NAN	NANT	0	2.00	ZZ2S
119	1zzn_B_U126_A127	NAN	NANT	0	1.65	OP19
120	1zzn_B_A127_G128	NAN	NANT	0	1.09	OP04
121	1zzn_B_G128_A129	NAN	NANT	0	0.81	IC07
122	1zzn_B_A129_G130	AAA	AA08	26	0.65	AA08
123	1zzn_B_G130_A131	AAA	AA00	14	0.38	AA00
124	1zzn_B_A131_C132	AAA	AA00	65	0.20	AA00
125	1zzn_B_C132_U133	AAA	AA00	30	0.32	AA00
126	1zzn_B_U133_A134	AAA	AA08	49	0.28	AA08
127	1zzn_B_A134_G135	NAN	NANT	0	0.36	AB2S
128	1zzn_B_G135_A136	NAN	NANT	0	0.66	AAS1
129	1zzn_B_A136_C137	NAN	NANT	0	0.76	OP04
130	1zzn_B_C137_G138	NAN	NANT	0	1.57	AB02
131	1zzn_B_G138_G139	AAA	AA00	68	0.18	AA00
132	1zzn_B_G139_C140	AAA	AA00	43	0.30	AA00
133	1zzn_B_C140_A141	AAA	AA00	22	0.29	AA00
134	1zzn_B_A141_C142	AAA	AA00	60	0.22	AA00
135	1zzn_B_C142_C143	AAA	AA00	47	0.23	AA00
136	1zzn_B_C143_C144	AAA	AA00	64	0.22	AA00
137	1zzn_B_C144_A145	AAA	AA00	69	0.14	AA00
138	1zzn_B_A145_C146	AAA	AA08	78	0.16	AA08
139	1zzn_B_C146_C147	AAA	AA00	59	0.27	AA00
140	1zzn_B_C147_U148	AAA	AA08	78	0.33	AA08
141	1zzn_B_U148_A149	NAN	NANT	0	0.66	AA00
142	1zzn_B_A149_A150	NAN	NANT	0	0.53	AA07
143	1zzn_B_A150_G151	AAA	AA08	32	0.51	AA08
144	1zzn_B_G151_G152	AAA	AA00	79	0.27	AA00
145	1zzn_B_G152_C153	AAA	AA00	55	0.37	AA00
146	1zzn_B_C153_A154	AAA	AA00	18	0.46	AA00
147	1zzn_B_A154_A155	OPN	OP03	23	0.32	OP03
148	1zzn_B_A155_A156	AAA	AA08	76	0.39	AA08
149	1zzn_B_A156_C157	AAu	AA12	57	0.27	AA12
150	1zzn_B_C157_G158	NAN	NANT	0	0.84	AA05
151	1zzn_B_G158_C159	AAA	AA04	53	0.42	AA04
152	1zzn_B_C159_U160	AAA	AA08	32	0.41	AA08
153	1zzn_B_U160_A161	NAN	NANT	0	0.46	IC02
154	1zzn_B_A161_U162	NAN	NANT	0	1.74	BB17
155	1zzn_B_U162_G163	NAN	NANT	0	0.85	OP12
156	1zzn_B_G163_G164	AAA	AA00	60	0.27	AA00
157	1zzn_B_G164_U165	AAA	AA00	36	0.32	AA00
158	1zzn_B_U165_G166	AAA	AA03	53	0.30	AA03
159	1zzn_B_G166_A167	NAN	NANT	0	0.47	OP06
160	1zzn_B_A167_A168	NAN	NANT	0	0.67	BA05
161	1zzn_B_A168_G169	NAN	NANT	0	0.34	AB1S
162	1zzn_B_G169_G170	NAN	NANT	0	1.22	IC03
163	1zzn_B_G170_C171	NAN	NANT	0	1.76	OP06
164	1zzn_B_C171_A172	NAN	NANT	0	1.28	OP22
165	1zzn_B_A172_U173	NAN	NANT	0	0.45	OP26
166	1zzn_B_U173_A174	AAA	AA03	83	0.33	AA03
167	1zzn_B_A174_G175	AAw	AA01	45	0.35	AA01
168	1zzn_B_G175_U176	AAA	AA08	93	0.12	AA08
169	1zzn_B_U176_C177	AAw	AA01	78	0.21	AA01
170	1zzn_B_C177_C178	NAN	NANT	0	0.60	AA08
171	1zzn_B_C178_A179	NAN	NANT	0	0.58	AA10
172	1zzn_B_A179_G180	NAN	NANT	0	0.77	AA04
173	1zzn_B_G180_G181	AAA	AA00	44	0.24	AA00
174	1zzn_B_G181_G182	AAA	AA08	61	0.37	AA08
175	1zzn_B_G182_A183	NAN	NANT	0	1.50	BA16
176	1zzn_B_A183_G184	NAN	NANT	0	1.18	OP12
177	1zzn_B_G184_U185	AAA	AA00	65	0.24	AA00
178	1zzn_B_U185_G186	AAA	AA08	56	0.38	AA08
179	1zzn_B_G186_G187	AAu	AA12	63	0.35	AA12
180	1zzn_B_G187_C188	AAA	AA00	42	0.30	AA00
181	1zzn_B_C188_G189	AAA	AA00	18	0.49	AA00
182	1zzn_B_G189_A23190	NAN	NANT	0	2.63	OP11
183	1zzn_B_C1001_C1002	AAA	AA04	23	0.46	AA04
184	1zzn_B_C1002_A1003	AAw	AA06	57	0.47	AA06
185	1zzn_B_A1003_U1004	NAN	NANT	0	0.83	IC03
186	1zzn_B_U1004_U1005	ICL	IC02	51	0.41	IC02
187	1zzn_B_U1005_G1006	NAN	NANT	0	0.68	ZZ02
188	1zzn_B_G1006_C1007	NAN	NANT	0	1.18	IC03
189	1zzn_B_C1007_A1008	NAN	NANT	0	0.94	BA16
190	1zzn_B_A1008_C1009	AAw	AA11	54	0.42	AA11
191	1zzn_B_C1009_U1010	NAN	NANT	0	1.07	OP30
192	1zzn_B_U1010_C1011	NAN	NANT	0	0.80	AA06
193	1zzn_B_C1011_C1012	NAN	NANT	0	0.44	AA09
194	1zzn_B_C1012_G1013	NAN	NANT	0	1.53	OP17
195	1zzn_B_G1013_G1014	AAA	AA00	66	0.26	AA00
196	1zzn_B_G1014_C112	NAN	NANT	0	0.96	OP08
197	1zzn_C_A1_C2	AAA	AA00	95	0.13	AA00
198	1zzn_C_C2_G3	AAA	AA00	46	0.26	AA00
199	1zzn_C_G3_G4	AAw	AA10	57	0.15	AA10
200	1zzn_C_G4_C5	AAA	AA08	21	0.31	AA08
201	1zzn_C_C5_C6	AAA	AA00	68	0.27	AA00
202	1zzn_C_A191_A192	NAN	NANT	0	0.51	AA09
203	1zzn_C_A192_G193	AAw	AA05	44	0.29	AA05
204	1zzn_C_G193_C194	AAA	AA00	72	0.17	AA00
205	1zzn_C_C194_C195	AAA	AA00	47	0.17	AA00
206	1zzn_C_C195_A196	AAw	AA06	39	0.29	AA06
207	1zzn_C_A196_C197	AAw	AA11	66	0.45	AA11
208	1zzn_C_C197_A198	NAN	NANT	0	0.63	AA04
209	1zzn_C_A198_C199	AAA	AA00	81	0.28	AA00
210	1zzn_C_C199_A200	NAN	NANT	0	1.21	AA13
211	1zzn_C_A200_A201	AAA	AA00	9	0.46	AA00
212	1zzn_C_A201_A202	AAA	AA08	46	0.34	AA08
213	1zzn_C_A202_C203	AAA	AA08	26	0.55	AA08
214	1zzn_C_C203_C204	AAA	AA00	89	0.24	AA00
215	1zzn_C_C204_A205	NAN	NANT	0	0.54	AA00
216	1zzn_C_A205_G206	NAN	NANT	0	0.85	AA07
217	1zzn_C_G206_A1	NAN	NANT	0	1.31	OP31
218	1zzn_D_A2_5MU1	NAN	NANT	0	0.39	AA08
219	1zzn_D_C3_A2	AAw	AA01	8	0.28	AA01

Steps with non-standard or missing atoms have not been assigned, description of conformers is defined in the table.

step:
Table of conformers

	δ1	ε1	ζ1	α2	β2	γ2	δ2	χ1	χ2	μ	NN	CC
step_torsions
ntC_average
Δ torsions
torsion scores

comments	step confal = NaN cartesian RMSD = NaN Å pseudorotation: NA details: NA

Similarity of step to class averages

Browse conformers

Show

Color by conformation group (pyramids)

Color by NtC (balls)

A-B

B-A

B

IC

OPN

Z

N

Results of the assignment of 219 detected steps in 1 model(s), can be also downloaded as csv or json file. Average confal 0, percentile 0.

Download

Restraints

User-based restraints

Definitions

Download the papers

Browse conformers

Show

group
visible